Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g0977 ATGGCTGTACAACCAGAGGTTGAGCATCCCAGAAAGGCCTTCGGATGGGCAGCTAGGGATCCATCTGGGCTTCTATCCCCTTTCGAGTTCTCTAGAAGGCACGAGATTGTTGGTGTAGTGACTGAGGTGGGAAGCAAGGTAACCAAATTCAATGTTGGAGACAAGGTGGGTGTGGGATGCTTGGTTGGGTCCTGCCGTTCATGTCAAAGCTGTGCCGACAACTTAGAGAACCACTGCTCAAAATACATTCTCACATATGGGGCCGAGTATATTGATGGCACTATCACATATGGAGGCTACTCTGACTTGATGGTTTCAGACGAGCACTTCGTGGTCCGCATCCCAGATTCCCTACCTCTTGACGCTGCTGCTCCTCTCCTTTGTGCTGGCATCACAGTGTATAGCCCTTTAAGATATTTTGGTCTGGACAAGCCTAGTCTTCATGTGGGTGTGGTTGGTCTAGGTGGGCTTGGCCATATGGCGGTCAAGTTTGCAAAAGCTCTTGGGGCTAGGGTCACAGTCATCAGTACATCTCCTAACAAAAAGAAGGAAGCTATGGAACATTTAGGAGCTGACTCCTTTATAGTCAGCCGTGAGCATGATCAGATGCAGGCTGCAATGGGCACCTTGGATGGAATCATTGACACGGTTTCCGCAGTGCATCCTCTCTTGCCTTTGATTGGTCTGTTGAAGTCTAATGGGAAACTTGTTTTGGTCGGCGCACCAGAGAAACCTCTGGAGTTGCCAATCTTTCCTTTGCTTTCGGGTAGAAAGATAGTGGCTGGGAGTGGCATTGGGGGGATGAAGGAGACACAAGAAATGATTGATTTTGCTGCTAAACACAACGTAAAACCAGACATAGAGGTTGTTCCGATGGACTATGTGAACATCGCAATGGAGCGCCTCCTCAAAGCAGATGTCAAATATCGATTTGTTATTGACATTGGGAACACACTGAAGCCAAGCTCTTAG 972 0.4825 MAVQPEVEHPRKAFGWAARDPSGLLSPFEFSRRHEIVGVVTEVGSKVTKFNVGDKVGVGCLVGSCRSCQSCADNLENHCSKYILTYGAEYIDGTITYGGYSDLMVSDEHFVVRIPDSLPLDAAAPLLCAGITVYSPLRYFGLDKPSLHVGVVGLGGLGHMAVKFAKALGARVTVISTSPNKKKEAMEHLGADSFIVSREHDQMQAAMGTLDGIIDTVSAVHPLLPLIGLLKSNGKLVLVGAPEKPLELPIFPLLSGRKIVAGSGIGGMKETQEMIDFAAKHNVKPDIEVVPMDYVNIAMERLLKADVKYRFVIDIGNTLKPSS 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g0977 323 PANTHER ALDEHYDE REDUCTASE 34 318 IPR047109 GO:0016616
Glsi05g0977 323 Pfam Alcohol dehydrogenase GroES-like domain 32 113 IPR013154 -
Glsi05g0977 323 FunFam Putative cinnamyl alcohol dehydrogenase 6 286 315 - -
Glsi05g0977 323 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 118 284 IPR036291 -
Glsi05g0977 323 SUPERFAMILY GroES-like 30 161 IPR011032 -
Glsi05g0977 323 Gene3D - 129 285 - -
Glsi05g0977 323 SMART PKS_ER_names_mod 1 313 IPR020843 GO:0016491
Glsi05g0977 323 CDD CAD1 14 314 IPR047109 GO:0016616
Glsi05g0977 323 Gene3D - 33 315 - -
Glsi05g0977 323 FunFam Cinnamyl alcohol dehydrogenase 129 285 - -
Glsi05g0977 323 Pfam Zinc-binding dehydrogenase 156 279 IPR013149 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g0977 Glsi-ChrGlsi05 59823807 59825318 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g0977 11 322 Monolignol Biosynthesis Gene Families AT4G37990 63.429 2.63e-141 402