Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g0973 ATGGAGCAGATCCAACTGAACAATTTTAAGCAAGACTCAGAAACCCTAACCTCAGATTCTTCCTTTTCTCGGCTGCTTGACGGAGAGACCGTTGCGTCACGTCATCAGGAACATAAAGATTCTACAATGGAAGAGGTGGACGAGTCCTTGTCCGATTCGATGGTTTGTGACTCCCGTTCAAGACTGATCCCAACTGGGTTTAGGAGATCTGACAGCACAGAGGGATATGTGATGTTTGTAAATGCCGGAGGGGAGGCTATAAATGAAGCAGATGCGGGAATGACTGTCCTGGGTGATTCCTTCTATGAAGGAGGGAACGTTTTACGTACCAATGAGCAAATAGTGGAGGCTGGAGATTGTCCACTTATCTATCAATCCGCACGGTTGGGAAACTTTTGTTATAGATTTGATAACCTTCCTCCCGGAGACTATAATGTTGATCTTCATTTTGTGGAGATTATTAACATAAATGGTCCTAAAGGTATAAGGGTGTTCAATGTATATATCCAAGAAGAAAAGGTTCTGTCTGAATTAGATATCTTTGCGGTTGTTGGGGCCAATAAGCCGCTGCAGTTTATTGATTCAGGGGTTTATGTGAAGGACGATGGTGTAATTCTCATAAGATTTGAAAGTATCAATGGAAGCCCAGTGGTTAGTGGCATCTGCATTAGGAGAGCAACAAAGGAGTCAGTTCCCCAAGTGACGCATGATTACATTAAATGTAACTACTGTTCTGCTCAGATTGAAATTCCTGCATCACAGAAGAAAATTATGCAAACAAAGTCCACTGCAAAGTATGAGAAGAAGATAAATGAGCTTACCATACAGTGTCAGTTCAAGACGAAAGAATGCCACGAGGCATGGATGTCATTAACTGCAACAAATGAGCAATTGGAAACTGTCCAGATGGAACTTGACAACGTGACATTTAAGACGCTCTCTCTTGATCAAACTGTGGAGAAGCAAGCTGAAAACCTGAGGAATATTTCTAACAGCTATGAGTATGATAAGAAGAAATGGACAGAAGCCATCAGTAGTTTACAGGAAAAGATAAAGTTGATGAAGACTGAACATACTCAGCTTTCCTGTGAAGCGCATGAATGTGTTGATTCAATCCCTGAACTAAATAAAATGGTTTTCTCAGTTCAGGAATTGGTTAAGCAATGTGAAGATCTTAAAGTGAAATACAACGAAGAGATGGCACAGAGAAAGAAGCTCTTTAATGAAGTTCAGGAGGCTAAAGGGAACATTAGAGTTTTCTGCCGTTGTCGTCCAATGAATAAGGATGAAACCTTAGCCGGGTGTACAACAGTCGTGGATTTTGATGCGGCAAAGGATGGATGTCTTGGAATTTTGACAGGTGGCTCCGCCAAAAAATCCTTTAGATTTGACAGGGTTTATACACCAAAACATGATCAAGTTGATGTTTTCTCTGATGCTTCATCAATGGTAATCTCTGTGCTGGATGGCTACAACGTTTGTATATTTGCTTACGGGCAAACTGGAACGGGAAAGACTTTTACCATGGAGGGAACAGAGCAGAACAGAGGAGTAAATTATAGGACTCTTGAGCACTTGTTTAAAATTGCCAAGGAAAGGAGCGAAACATTTGCATACGACTTATCTGTTAGCGTGCTTGAGGTTTATAATGAACAAATCAGAGACCTACTGGCTTCAGGACCAACATCAAAAAAGCTGGAGATAAAACAAGCCTCTGAAGGGTTTCATCATGTTCCTGGTGTTGTAGAAGCCAAGGCTAATAACGTTAAGGAAGCTTGGAATATACTGCAGGCTGGAAGCAATGCTAGAGCTGTTGGAAGCAATAATGTTAATGAGCATAGCAGTCGGTCTCACTGCATGCTTTGTATAATGGTAAAAGCAAAAAATATGATAACGGGTGAGTGTACCAAGAGCAAGCTTTGGCTAGTGGATTTGGCAGGCAGTGAAAGACTTGCAAAAACTGACGTTCAAGGGATGCGGCTTAAGGAAGCACAAAATATCAATCGATCTCTTTCGGCTCTTGGGGATGTGATTTCCGCTTTAGCAGCCAAAAGTAGTCACATTCCATATCGGAACTCTAAATTGACACATTTGCTTCAAGACTCACTAGGAGGTGACTCCAAAGCCTTGATGTTTGTACAAATCAGCCCTTCGGACCAGGATTTAAGTGAGACTCTGAGCTCACTAAATTTTGCTACTCGAGTGAGGGGAATTGAATTGGGTCCTGTGAAGAAACAAATTGATACAAGTGAGCTTCAAAAGATGAAAGCAATGCTTGAGAAGGCACGGAATGAGTGCAGAATTAAAGATGAATCCATACAGAAACTAGAAGAAAATTTGCAGAACTTGGAAAGCAAAGCCAAAGGCAAGGATCTTATTTACAGGAATCTACAAGAAACTATTAAAGAGCTTGAAGGCCAAATTGAGTTGAAGATAGCCATGCAAAAGCAGTCAGAAAAGCAAGTTTCTGAATTGTCAGACAAATTGAAGGGAAAAGAAGAAACCTGCAGTGCTCTCCAACATAAGGTCAAAGAGCTAGAGAAAAAGCTGAAAGAACAATTGCAGTCAGAGACAGCAAGCTTCCAACACAAGGTTTGTGACCTGGAAAACAAGCTGAAAGAGCAGTTGCAAGAGTCTGACTCTCAATCTGCTATTTTAAAAGATAAGGTTAAGGAGCTTGAGAGGAAACTGAAAGAGCAGGAACGGAGTTCAGAGTCTTTACTTCATCAAAAGATGAAGGAAGCTGAGGACAGGTTCAGAGAGCGAGAGCAACGGTGGCAACAAGCTCATCATTTTGTTGATGCAGTGAAGGCTACTCCAGACGAAGGGAAAAACAGAAGCTGCATAAGTGAGGACTACCCAAGCGAGATTGAGCCTCACATTCTAAGGTGTTCAAACTCGGTAAACCGCCAGATAAGTCAAGGTTCTGCTTCGTTAAGAGGGAACGATTCTATTAATCAGATGAGAAGCAAAAGAGAATTCAGAAGCATTGAAACAGAGAACAACTTTGTCATGTCATCATCCTCTTTACACGATAGCAAAGTCATGAGGAAATCTGATCCTCCCAAAATAGGAAGAGTTGGAAGGGCCACAAGGCCAGTCTTGGCTACTCAACCCCCATTGACCCACAAGAGAGTTAGCAGAGATCAGGTTCAAGGAATTAAGGAGAGGGACAATAAGAAGAAAATCTGGTCAAGATAG 3201 0.4164 MEQIQLNNFKQDSETLTSDSSFSRLLDGETVASRHQEHKDSTMEEVDESLSDSMVCDSRSRLIPTGFRRSDSTEGYVMFVNAGGEAINEADAGMTVLGDSFYEGGNVLRTNEQIVEAGDCPLIYQSARLGNFCYRFDNLPPGDYNVDLHFVEIININGPKGIRVFNVYIQEEKVLSELDIFAVVGANKPLQFIDSGVYVKDDGVILIRFESINGSPVVSGICIRRATKESVPQVTHDYIKCNYCSAQIEIPASQKKIMQTKSTAKYEKKINELTIQCQFKTKECHEAWMSLTATNEQLETVQMELDNVTFKTLSLDQTVEKQAENLRNISNSYEYDKKKWTEAISSLQEKIKLMKTEHTQLSCEAHECVDSIPELNKMVFSVQELVKQCEDLKVKYNEEMAQRKKLFNEVQEAKGNIRVFCRCRPMNKDETLAGCTTVVDFDAAKDGCLGILTGGSAKKSFRFDRVYTPKHDQVDVFSDASSMVISVLDGYNVCIFAYGQTGTGKTFTMEGTEQNRGVNYRTLEHLFKIAKERSETFAYDLSVSVLEVYNEQIRDLLASGPTSKKLEIKQASEGFHHVPGVVEAKANNVKEAWNILQAGSNARAVGSNNVNEHSSRSHCMLCIMVKAKNMITGECTKSKLWLVDLAGSERLAKTDVQGMRLKEAQNINRSLSALGDVISALAAKSSHIPYRNSKLTHLLQDSLGGDSKALMFVQISPSDQDLSETLSSLNFATRVRGIELGPVKKQIDTSELQKMKAMLEKARNECRIKDESIQKLEENLQNLESKAKGKDLIYRNLQETIKELEGQIELKIAMQKQSEKQVSELSDKLKGKEETCSALQHKVKELEKKLKEQLQSETASFQHKVCDLENKLKEQLQESDSQSAILKDKVKELERKLKEQERSSESLLHQKMKEAEDRFREREQRWQQAHHFVDAVKATPDEGKNRSCISEDYPSEIEPHILRCSNSVNRQISQGSASLRGNDSINQMRSKREFRSIETENNFVMSSSSLHDSKVMRKSDPPKIGRVGRATRPVLATQPPLTHKRVSRDQVQGIKERDNKKKIWSR 1066
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g0973 1066 ProSiteProfiles Kinesin motor domain profile. 416 738 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Glsi05g0973 1066 Coils Coil 876 910 - -
Glsi05g0973 1066 Coils Coil 745 856 - -
Glsi05g0973 1066 CDD KISc_C_terminal 414 740 - -
Glsi05g0973 1066 Gene3D Kinesin motor domain 356 740 IPR036961 -
Glsi05g0973 1066 PRINTS Kinesin heavy chain signature 639 657 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Glsi05g0973 1066 PRINTS Kinesin heavy chain signature 490 511 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Glsi05g0973 1066 PRINTS Kinesin heavy chain signature 688 709 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Glsi05g0973 1066 PRINTS Kinesin heavy chain signature 608 625 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Glsi05g0973 1066 Coils Coil 337 364 - -
Glsi05g0973 1066 Coils Coil 382 416 - -
Glsi05g0973 1066 ProSitePatterns Kinesin motor domain signature. 638 649 IPR019821 GO:0003777|GO:0005524|GO:0007018
Glsi05g0973 1066 SMART kinesin_4 414 746 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Glsi05g0973 1066 FunFam kinesin-like protein KIN-14R 365 740 - -
Glsi05g0973 1066 PANTHER KINESIN-LIKE PROTEIN KLP-3 100 820 IPR027640 GO:0003777|GO:0007018
Glsi05g0973 1066 MobiDBLite consensus disorder prediction 1048 1066 - -
Glsi05g0973 1066 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 416 775 IPR027417 -
Glsi05g0973 1066 Gene3D - 73 229 - -
Glsi05g0973 1066 Pfam Malectin domain 77 221 IPR021720 -
Glsi05g0973 1066 FunFam Kinesin-like protein KIN-14R 72 227 - -
Glsi05g0973 1066 MobiDBLite consensus disorder prediction 1009 1066 - -
Glsi05g0973 1066 Pfam Kinesin motor domain 422 738 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g0973 Glsi-ChrGlsi05 59787490 59793768 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g0973 388 791 Calmodulin-binding Proteins AT5G65930 41.565 9.40e-87 303