Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g0972 ATGGATGCAGTGCTTAAAGCTCTCAAACAATGCAACCCAGAACTGCAGTCAACACCAAGGCACTTGTATAACCTCAAAGCAAAGATTAGACAAGGAAATCTATCAGAGAAAACTTTCAAGTCATGGAGGCCAAATAGATCTATCTCTGTTGAGACAATCAATACTCCATCTGGTGGTTCATCAAAGAAAAACAACCAACTGCTGAAGGTTCATAATTTTATTGGAGGGAGATATGTAGATTCTCAAAGTTGTGGAATTGTTGATGTTACAAATCCTGCTACACAAGAAGTTGTGTCTCAAGTTCCTTTAACTACATATGACGAGTTCAAAGCTGCAGTTAGTGCAGCCAAGCAAGCTTTTCCTTCGTGGAAAAACACCCCTATCACCACTCGTCAGCGTATTATGTTTAAGCTCCAGGAACTTATCCACAGAGATATTCACAAGCTTGCCATGAATATCACCTTAGAGCAGGGTAAGACATTAAAAGGTGCCAAAGCAGATGTGCTCCATGGTTTAGAGATGGTAGAACATGTGTGTGGGATGGCAAATCTTCAAATGGGGGAGTTTTTCCCCAATGCCTGTGATGGAATTGATACATACTGCATCAGAGAGCCTCTTGGAGTTTGTGCTGGAATATGCCCCTTCAACTTTCCTGCAATGAGACCCTTGTGGATGTTCCCTATTGCGGTTACATGTGGCAACACATTTATTCTCAAGCCATGTGAGAAAAATCCAGGGTCTTCAATGATACTTGCAGCACTAGCAATGGAAGCTGGTTTGCCAGATGGTGTGTTAAATATTGTTCATGGTACCCATGAGATTGTTAATTACATATGTGATGATGAGGATATAAAAGCTGTGTCATTCATGGGTCCAATTGCGGCTGGGATGCACATATATGCCAGGGCTGCTGCTAGCGGGAAACGTGTCCAGTCCAATACAGGTGGCAAAAATCATGCAATTGTTATGCCAGATGCTAACTTGGATGCTACTCTAGATGCTCTTATTGCTGCTGCCTTTGGTGCCGCAGGAGAGAGGTGCATGACTCTAAGCACGGCTGTTTTTGTTGGAGGATCAATGCCATGGGAAGAAGAACTTGTCCAGCGTGCCAAAGCACTTAAAGTGAATGCAGGAACAGATCCTGGTGCTGACCTTGGTCCAGTTATTAGCAAAGAGGCAAAGGATCGGATATGTAGATTAGTTCAGAGCAGTGTTGAAAATGGTGCAAGACTCCTGCTTGATGGAAGACATATTGTGGTACCAGGATATGAGAATGGAAACTTTGTCTCTCCTACTATCTTATCTAACGTTACAACAAACATGGAGTGCTACAAGGAAGAAATTTTTGGACCAGTTCTGCTCTGCATGCAGGCTGATAGCCTAGATGAGGCTATATCAATAATCAACAAAAACAAGTATGGAAGTGGAGCTACCATATTTACCACATCTGGTATAGCTGCTAGGAAATTCCAGAGTGAGGTTGAGGCTGGTCTGGTTGGGATCAATGTTACTGTTCCTGTTCCCTTGCCATTTTCCTCCTTCAATGGGTCCAAGGCTTCTTTTGGCGGTGATCTCAATTTTTGTGGAAAGGCAGGAGTACATTTTTATACCCAAATCAAAACAGTGGCACAACAATGGAAAGAGTTTCCTAGACTAGGTGCTTTGCCTTCCGCATATCCATCAAAGACAGATATAACAAATCGACAAGCCTCCTCATTAGTGCCTCCTACATCTGAAAGACATTCACCTAGAGAAATAGCACCACAAATCATGCCTCTAGAATCTGAGAGTGAGTCACCAACGCATGAGGTAGAAATTGCCATCCCCGATGCTGATGTTGAGATCACAGCCATGTCATCCGCCTCTCCAACAACGGATAAGGAACTCAGAAGACAGTGTATGTCCCTGGTTCTGCCTTCAACATCTGAGAGGGATATGGCAGATCAGGATTTGCCACTGGTATTATCACCTGCAACACAGAGGGGTTTAACAAGCCAAGGAGTATCTGTAGCCACACCCCAGACATCAGAGAGGTTGTACTTCTCTAAAACATCACAGTGGAATGAAAGTTCGCCTGCAACATCTCAAAGGAGTGAAAATATCCCAGCAACTTCTGAGAGGAGTCATGTGTCTCCTCACAGGAATGGCAACACATCTCCGGCATCTCAAGGGACTGATACTGCCACAACTTTGAAATCAGAGAGGGCATATATGCCTACGTCCCATAAAATTGATAACATCAGTTCATCCCATAGGATCGACACTGCTGTGCATTCTACTTCTGAAAGGGTATACATACTTGCAGCATCTCATTTGAATGAAACCATTGGTCGAACATTTGAAAGAGGTGACCCCATGTTTCCAACTTCTGAGAGGATATACATGCCTGCAACATCTCAGAGGAACGACCTTATAGGCTCAACATCTCACAGAACTGATATTGGCTTACGTCCAACTTCGGAGAGGATATATACATCTGCAGCATCTCAGAGAAATGAAAACATTAGTCCAGCTTCTCAGCTTGGTGATGCTCTGCCTCTAACTTCTGAGAGGGATTTCATGCCTCCAATAGTACAGAATATGCCGGCTAGTTCAGAGAGGTTATATGTACCAACTACTTCTCAAAGGATGTATAATAGAAACCCAATAATCTCAATGGATGAATTTCCCAGCCAAGCTGCGGCTATGACTTTGCCAACATCTCGGAGGATATAA 2715 0.4346 MDAVLKALKQCNPELQSTPRHLYNLKAKIRQGNLSEKTFKSWRPNRSISVETINTPSGGSSKKNNQLLKVHNFIGGRYVDSQSCGIVDVTNPATQEVVSQVPLTTYDEFKAAVSAAKQAFPSWKNTPITTRQRIMFKLQELIHRDIHKLAMNITLEQGKTLKGAKADVLHGLEMVEHVCGMANLQMGEFFPNACDGIDTYCIREPLGVCAGICPFNFPAMRPLWMFPIAVTCGNTFILKPCEKNPGSSMILAALAMEAGLPDGVLNIVHGTHEIVNYICDDEDIKAVSFMGPIAAGMHIYARAAASGKRVQSNTGGKNHAIVMPDANLDATLDALIAAAFGAAGERCMTLSTAVFVGGSMPWEEELVQRAKALKVNAGTDPGADLGPVISKEAKDRICRLVQSSVENGARLLLDGRHIVVPGYENGNFVSPTILSNVTTNMECYKEEIFGPVLLCMQADSLDEAISIINKNKYGSGATIFTTSGIAARKFQSEVEAGLVGINVTVPVPLPFSSFNGSKASFGGDLNFCGKAGVHFYTQIKTVAQQWKEFPRLGALPSAYPSKTDITNRQASSLVPPTSERHSPREIAPQIMPLESESESPTHEVEIAIPDADVEITAMSSASPTTDKELRRQCMSLVLPSTSERDMADQDLPLVLSPATQRGLTSQGVSVATPQTSERLYFSKTSQWNESSPATSQRSENIPATSERSHVSPHRNGNTSPASQGTDTATTLKSERAYMPTSHKIDNISSSHRIDTAVHSTSERVYILAASHLNETIGRTFERGDPMFPTSERIYMPATSQRNDLIGSTSHRTDIGLRPTSERIYTSAASQRNENISPASQLGDALPLTSERDFMPPIVQNMPASSERLYVPTTSQRMYNRNPIISMDEFPSQAAAMTLPTSRRI 904
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g0972 904 NCBIfam CoA-acylating methylmalonate-semialdehyde dehydrogenase 70 546 IPR010061 GO:0004491
Glsi05g0972 904 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 89 521 IPR016162 GO:0016491
Glsi05g0972 904 MobiDBLite consensus disorder prediction 683 740 - -
Glsi05g0972 904 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 315 515 IPR016163 GO:0016620
Glsi05g0972 904 SUPERFAMILY ALDH-like 66 548 IPR016161 GO:0016491
Glsi05g0972 904 CDD ALDH_F6_MMSDH 70 546 IPR010061 GO:0004491
Glsi05g0972 904 FunFam Methylmalonate-semialdehyde dehydrogenase [acylating] 74 322 - -
Glsi05g0972 904 PANTHER MALONATE-SEMIALDEHYDE DEHYDROGENASE 3 819 IPR010061 GO:0004491
Glsi05g0972 904 FunFam Methylmalonate-semialdehyde dehydrogenase (Acylating) 315 515 - -
Glsi05g0972 904 Pfam Aldehyde dehydrogenase family 78 542 IPR015590 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g0972 Glsi-ChrGlsi05 59772867 59784909 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g0972 69 530 Aldehyde Dehydrogenase Gene Family AT2G14170 74.675 0.0 728