Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g0946 ATGCCTCTCATGGACCCTCTTGTGACTCTTTTTGGTAGCGTACACGAGAAACTCCCTGAGACTGGAAGCATGATTTTTCCGAATTTTGGGAGCATGTGCAGCACAGCTGAGCCTCAAATTAAAAATCAACTGTGGGATGAAGAGAGCCTACAAAGAGAAGGTGAAGACTACGCATCAGATGTTGCTGCTGGAGACTCTGATGACAATTTGCGTAGTCCTTTAATCTCGTGTCAAACAACAAGCATTGAAAAAGAGAGAGCTCGAAATCTCAGCAGTGATTGGGTAGGGTGGGGAAGGGTGAAGCTCGGGGTTTTCCATAGCAAGGCTATGGCGGAACAAAGGAATCGATGGAGCTGGGAGGTGGGTGGGTTCGAGCCATGGAAGTCGTCGCCGCCGCCTTCATTTGACCAACACAATCAAATACCTACTGCACCGTTGGTTAGGAGGCACTCCATCTCGGCGTCCTCGGGTCTTCCGCAATCCGAGCTGTCTAAAAACTCCATGTCCTCCAAGTTTCAGCGATTGAGGGACAAAGTCAAGCTTGCTAGAGAAGATTACTTGCAGTTAAGACAAGAAGTGAGTGACCTTCAGGAATATTCAAATGCAAAACTTGACCGAGTTACACGATATCTTGGTGTTCTTGCTAACAAAACCCGCAAGCTAGATCAAGTTACCCTTGAAACTGAAGCAAGAATATCTCCGGTGATTAGCGAGAAGAGGAGATTGTTCAATGATTTATTGACATCTAAAGGAAATATACGAGTATTCTGCCGTACAAGACCATTATTTGAAGATGAAGGTTGCTCTGTTGTTGAATTTCCGGATGACTATACCATCCGTGTAAATACTAGTGATGAATCCTTGTCCCTCTCCAAGAAAGATTTTGAATTTGATCGAGTTTATGGACCTCATGTGGGACAAGGATCAAGCCATGATCGGGGTTTGTATGCTCGTTGTTTTGAGGAGTTGTTTGATTTAGCCAACTCAGATTCAACTTCCACTTCTCGATATGAATTCTCTGTTACAGTTTTTGAGCTCTATAATGAGCAGACAAGGGATCTACTCTTGGAGTCAGCAAAAAGCATGCCCAAACTCCACTTAGGATTGCCAGATTATTCTGTTGAACTGGTGCAGGAAAAAGTTGATAACCCTCTGGAATTTTCTAGGGTTTTGAAAGCTGCATTACAGAGTCGGGGAAACGATGTATTAAAGATTATTGTCTCTCATTTCTATGTGGATTTCATGTCTTGCCTTGTCAGGATTGTTACAGTACACATATTGTATAACAATTTGATCACTGGTGAAAACTCATATAGTAAACTTTCTCTGGTTGACTTGGCTGGAAGTGAAGGCTTAATAACAGAAGATGATAGTGGGGAGCGTGTTACAGATTTGCTTCATGTTATGAAGTCGCTTTCAGCTTTGGGAGATGTTCTGTCTTCTTTGACATCAAAGAAGGATGTTATTCCATATGAAAATTCAGTGCTCACGAAACTGCTTGCAGATTCACTTGGTGGGAATTCAAAAACTCTGATGATTGTAAATGTCTGTCCAAATGTTTCAAATTTATCTGAGACTTTATCATCTCTCAATTTCTCTGCCAGAGCTCGGAATTCTGTATTAAGCCTAGGAAATCGAGATACAATTAAGAAGTGGAGAGATATTGCAAATGATGCACGGAAGGAGTTGTATGAGAAGGAGAAAGAAATCCAAGATCTGAAACAAGAGGGACTGGGACTCCAGCAATCAATTAAAGATGCAAATGATCAGTGTGTCCTACTATTCAATGAAGTACAGAAGACATGGAGAGTTTCTTCTGCATTGCAGACAGATTTAAAGTCAGAGCATATTATGCTGGAAGATAAGCATAAGATTGAGAAAGAACAAAATGCTCAGCTAAGAAATCAAGTTGCTCAACTGTTGCAATTAGAGCAGGACCAAAAATTGCAGATTGAAGAGCAAGATTCAACCATCCAAAGTTTGCAGGCTAAAATTAAAGCCCTTGAAACACAGCTGAATGAAGCCATAAAATCAAGTGAAAATAGATCAACATTTGGCCCAGAGCCTGATTCTGAAGCTCTATCCAATTCCAGGGAAACTGGAGATGGCATTAATTCTTCTGCAGTAACCAAGAAACTAGAAGAGGAACTCAAGAAACGTGATGCTCTGATTGAGAGGTTGCATGAAGAAAATCAGAAATTGTTTGATAGATTAACGGAAAAAGCATCTCTGGCTAGCTCACCTCAGTTGTCAAGTCCATCATCTATGGGATCAGTTAATGTTCTGCCTCAAGATACAGGGAGGAATAAGACCAGCAACAATGTAAGAGCTCAATCTATGGATGTTCTTCCTTCACCTTTGGCCACACACAAGAGTGATGGCACAGTTGCTTTAGTAAGATCTGGCTCTGAGAAAGTTAAGTCTACCCCTGCTGGTGAATATCTTACTGCTGCCCTGAATGACTTTGATCCTGATCAATATGAAGGCCTTGCTGCCATTTCGGATGGTGTGAACAAGCTTTTGATGCTGGTTCTGGCTGCTGTCATCAAAGCCGGTGCCTCTAGAGAACATGAGATACTTGCTGAAATTAGGGATGCTGTTTTCTATTTTATCCGGAAAATTGAACCAAAGAGAGTAATGGATACATTGCTTGTTTCTCGTGTTAGAATCCTGTATATAAGATCTTTGCTTGCTAAATCCCCAGAGCTGCAATCCATTAAGGTCTTGCCAGTTGAGTGCTTTCTTGAAAAGGCTAATACTGGACACAGTAGAAGTTCCAGCCGGGGGAGCAGCCCTGGAAGATCTCCAGTGCAATATTTTGATGAGCAAATCCAAGGATTTAAAGTGAATATAAAGCCAGAAAAGAAGTCCAAATTTTCATCTGTTGTGTTAAAGTTACGTGGAATTGATCAGGAGACCTGGAGACAGCAGGTAACTGGTGGAAAGCTTAGAGAAATTACTGAGGAAGCCAAAAGTTTTGCAATTGGAAACAAAGCTCTTGCTGCACTCTTTGTACATACACCAGCAGGTGAGCTGCAGCGCCAAATTAGATCCTGGCTTGCAGAGAACTTTGAATTTCTATCTGTCACAGGCAATGATTCATCCGGGGGGTCAACTGGACAGTTGGAGCTTCTTTCAACTGCAATTATGGATGGTTGGATGGCTGGACTTGGTGCAGCTCTGCCTCCTAAAACTGATGCTCTTGGTCAGCTGTTATTTGAATACACAAAACGTCTCTATACTTCTCAACTGCAACATTTGAAGGATATCGCTGGTACCTTGGCAGCAGAAGAGGCAGAAGATGCAGCACAAGTATCCAAGCTGCGTTCAGCTCTTGAATCTGTTGATCACAAGAGAAGAAAGATTATGCAACAAATGAGAAGTGATGCAGCTTTATTGACATTGGATGATAGTAGTTCACCTATTCAAACTCCTTCTACGGCAGCTGAAGAGGCTCGATTAGCGTCTCTCATTTCACTTGATGGCATATTGAAACAAATCAAGGATATAACAAAACATTCCACTGTGAACGCGGTGAGCAAAAGTAAGAAAAGAACAATGCTTGCTTCACTGGATGAATTAACGCAACGGATGCCTTTGCTTCTTGAAATTGACCATCCATGTGCTCAGAGGCACATTGCAGATGCTCGCCGCTTGGTTGAGTCAATCCCTGAAGATGACCACATTCAAGATCAATCACATGCTCGGAAGCCATCAACAGATGAAACTGATGTGGCACAGTGGAATGTCCTTCAATTTAATACGGGCTCTACCGCCCCATTTATAATCAAATGCGGAGCAAACTCAAATTCAGAACTAGTCATAAAAGCCGATTCTCGAATTCAAGAACCTAAAGGCGCAGAGATAGTGAGGGTTGCCCCTAGACCATCAATTTTGGAAAATATGAGCTTGGAGGAAATGAAACAAGTATTTGCCGAACTCCCCGAGGCTCTAAGCTTGCTTGCCCTTGCGAGGACTGCAGATGGAACTCGAGCACGGTATTCTCGACTATACAGGACCTTGGCTCTGAAGGTTCCATCCCTTAGGGATCTGGTCAGTGAACTTGAGAAAGGGGGTGCATTGAAGGATGTGAGAACATAA 4101 0.4245 MPLMDPLVTLFGSVHEKLPETGSMIFPNFGSMCSTAEPQIKNQLWDEESLQREGEDYASDVAAGDSDDNLRSPLISCQTTSIEKERARNLSSDWVGWGRVKLGVFHSKAMAEQRNRWSWEVGGFEPWKSSPPPSFDQHNQIPTAPLVRRHSISASSGLPQSELSKNSMSSKFQRLRDKVKLAREDYLQLRQEVSDLQEYSNAKLDRVTRYLGVLANKTRKLDQVTLETEARISPVISEKRRLFNDLLTSKGNIRVFCRTRPLFEDEGCSVVEFPDDYTIRVNTSDESLSLSKKDFEFDRVYGPHVGQGSSHDRGLYARCFEELFDLANSDSTSTSRYEFSVTVFELYNEQTRDLLLESAKSMPKLHLGLPDYSVELVQEKVDNPLEFSRVLKAALQSRGNDVLKIIVSHFYVDFMSCLVRIVTVHILYNNLITGENSYSKLSLVDLAGSEGLITEDDSGERVTDLLHVMKSLSALGDVLSSLTSKKDVIPYENSVLTKLLADSLGGNSKTLMIVNVCPNVSNLSETLSSLNFSARARNSVLSLGNRDTIKKWRDIANDARKELYEKEKEIQDLKQEGLGLQQSIKDANDQCVLLFNEVQKTWRVSSALQTDLKSEHIMLEDKHKIEKEQNAQLRNQVAQLLQLEQDQKLQIEEQDSTIQSLQAKIKALETQLNEAIKSSENRSTFGPEPDSEALSNSRETGDGINSSAVTKKLEEELKKRDALIERLHEENQKLFDRLTEKASLASSPQLSSPSSMGSVNVLPQDTGRNKTSNNVRAQSMDVLPSPLATHKSDGTVALVRSGSEKVKSTPAGEYLTAALNDFDPDQYEGLAAISDGVNKLLMLVLAAVIKAGASREHEILAEIRDAVFYFIRKIEPKRVMDTLLVSRVRILYIRSLLAKSPELQSIKVLPVECFLEKANTGHSRSSSRGSSPGRSPVQYFDEQIQGFKVNIKPEKKSKFSSVVLKLRGIDQETWRQQVTGGKLREITEEAKSFAIGNKALAALFVHTPAGELQRQIRSWLAENFEFLSVTGNDSSGGSTGQLELLSTAIMDGWMAGLGAALPPKTDALGQLLFEYTKRLYTSQLQHLKDIAGTLAAEEAEDAAQVSKLRSALESVDHKRRKIMQQMRSDAALLTLDDSSSPIQTPSTAAEEARLASLISLDGILKQIKDITKHSTVNAVSKSKKRTMLASLDELTQRMPLLLEIDHPCAQRHIADARRLVESIPEDDHIQDQSHARKPSTDETDVAQWNVLQFNTGSTAPFIIKCGANSNSELVIKADSRIQEPKGAEIVRVAPRPSILENMSLEEMKQVFAELPEALSLLALARTADGTRARYSRLYRTLALKVPSLRDLVSELEKGGALKDVRT 1366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g0946 1366 Coils Coil 710 733 - -
Glsi05g0946 1366 MobiDBLite consensus disorder prediction 1223 1241 - -
Glsi05g0946 1366 Coils Coil 616 678 - -
Glsi05g0946 1366 MobiDBLite consensus disorder prediction 1223 1242 - -
Glsi05g0946 1366 Gene3D Kinesin motor domain 307 578 IPR036961 -
Glsi05g0946 1366 ProSiteProfiles Kinesin motor domain profile. 300 539 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Glsi05g0946 1366 PANTHER KINESIN-LIKE PROTEIN KLP-3 164 307 IPR027640 GO:0003777|GO:0007018
Glsi05g0946 1366 MobiDBLite consensus disorder prediction 677 707 - -
Glsi05g0946 1366 PRINTS Kinesin heavy chain signature 489 510 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Glsi05g0946 1366 PRINTS Kinesin heavy chain signature 440 458 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Glsi05g0946 1366 MobiDBLite consensus disorder prediction 677 709 - -
Glsi05g0946 1366 ProSitePatterns Kinesin motor domain signature. 439 450 IPR019821 GO:0003777|GO:0005524|GO:0007018
Glsi05g0946 1366 SMART kinesin_4 250 547 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Glsi05g0946 1366 Coils Coil 172 199 - -
Glsi05g0946 1366 Coils Coil 549 590 - -
Glsi05g0946 1366 Gene3D Kinesin motor domain 197 306 IPR036961 -
Glsi05g0946 1366 Pfam Microtubule binding 238 305 IPR031852 GO:0008017
Glsi05g0946 1366 Pfam Kinesin motor domain 308 538 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Glsi05g0946 1366 MobiDBLite consensus disorder prediction 745 769 - -
Glsi05g0946 1366 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 252 576 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g0946 Glsi-ChrGlsi05 59568816 59585918 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g0946 239 540 Calmodulin-binding Proteins AT5G65930 31.014 1.46e-30 129
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi05g0946 05 59568816 59585918 Glsi09g0753 09 5151802 5160470 CCT