Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g0938 ATGGCAGATACCTTGGACCCTGTGACCTCAAACCTTCTGTGTTCGGAAAACAGCAATACCTGCTTTGATAATTTCGAATGTAATACCGCAGATGGGTCTGGAATTTTCCCTAATCAACAAAACATTAACGGAGGCCATCATTGTCCGAGTTCGGACAACCATGGATCGGGGTCTTTCATGGGTTTTCCGGTACAGAGTGAAGAAAATGTCAGACTAATGGTTGAGAGGGAGAAAGAACATCTGCCCACGGATAATTACCTGAGGAGGCTGTGTAGTGGGGACTTAGATTTGAGTGTTAGGAGAGAGGCTCTTGATTGGATTTTGAAGTCTCGTGCCTACTATGGTTTTGGAGCATTGAGCTTTTGTCTATCTATGAACTACTTGGATCGGTTCCTATCAATATATGAATTACCTAGAGGTAAAACTTGGACCGTGCAATTGTTAGCTGTGGCTTGTTTGTCAATAGCAGTTAAGATGGATGAGACCGAAGTGCCTCACTTAGTAGATTTACAGGTCGGAGAACCAAAGTTTGTATTCGAAGCTAAAACCATTCAGAGAATGGAGCTACTGGTGTTAAGCACATTGAGATGGAAAATGCAAGCTGTAACACCTTGTTCCTATATAGAATACTTCCTCAGTAAATTCACTTGTGGGCAATATCCAACAAAGTCATCCATTTCTAGATCAGTACAGCTCATAGTTGGCACAATCAGAGGTATTGACTTCTTGGACTTCAGGCCTTCCGAAGTGGCTGCAGCTGTAGCAATTTCTGTTACAAGGGAACTGCAAGAAATTGAGATGGCTAAGGTCATCTCTTGTTTAATGATTGATGAGAAGAGAGTTTTGAAGTGTCTTGAACTGATAGAAGATTTATCCTTGGTTAGTGTTTCTGCTAATTTGGGCAGTAACCCGGGGACATTTTCGCCCCGAAGCCCTGATGGGGTCCTGGATGCAGCATGCTTGAGCTATAAAAGTGGTGAATTAACTGTTGGGTCATGTCCAAATTCTTCACATAATACTCCTAATACGAAGAGGAGCAAATCGGACAGACCTCCTGATGGGACTTCCAAGTCATGA 1077 0.428 MADTLDPVTSNLLCSENSNTCFDNFECNTADGSGIFPNQQNINGGHHCPSSDNHGSGSFMGFPVQSEENVRLMVEREKEHLPTDNYLRRLCSGDLDLSVRREALDWILKSRAYYGFGALSFCLSMNYLDRFLSIYELPRGKTWTVQLLAVACLSIAVKMDETEVPHLVDLQVGEPKFVFEAKTIQRMELLVLSTLRWKMQAVTPCSYIEYFLSKFTCGQYPTKSSISRSVQLIVGTIRGIDFLDFRPSEVAAAVAISVTRELQEIEMAKVISCLMIDEKRVLKCLELIEDLSLVSVSANLGSNPGTFSPRSPDGVLDAACLSYKSGELTVGSCPNSSHNTPNTKRSKSDRPPDGTSKS 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g0938 358 Pfam Cyclin, N-terminal domain 71 199 IPR006671 -
Glsi05g0938 358 PANTHER CYCLINS 67 289 IPR039361 -
Glsi05g0938 358 CDD CYCLIN_AtCycD-like_rpt2 202 288 - -
Glsi05g0938 358 SMART Cyclin_C_2 202 324 IPR004367 -
Glsi05g0938 358 MobiDBLite consensus disorder prediction 328 342 - -
Glsi05g0938 358 Gene3D - 83 200 - -
Glsi05g0938 358 CDD CYCLIN_AtCycD-like_rpt1 99 197 - -
Glsi05g0938 358 MobiDBLite consensus disorder prediction 343 358 - -
Glsi05g0938 358 SUPERFAMILY Cyclin-like 62 199 IPR036915 -
Glsi05g0938 358 SMART cyclin_7 105 193 IPR013763 -
Glsi05g0938 358 MobiDBLite consensus disorder prediction 328 358 - -
Glsi05g0938 358 FunFam D2/4-type cyclin 83 196 - -
Glsi05g0938 358 Pfam Cyclin, C-terminal domain 202 294 IPR004367 -
Glsi05g0938 358 ProSitePatterns Cyclins signature. 100 131 IPR006671 -
Glsi05g0938 358 FunFam D6-type cyclin 197 286 - -
Glsi05g0938 358 Gene3D - 73 286 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g0938 Glsi-ChrGlsi05 59513560 59515610 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g0938 60 265 Core Cell Cycle Gene Families AT5G65420 63.636 5.13e-94 280