Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g0920 ATGGTTGGACCATGCCAACATCCCAAATCCACCATTAAATTCCTCTGTAGCTACGGCGGCAAAATCCTCCCCCGCTACCCCGACCGCAAGCTCCGCTACCTCGGTGGCCAAACACGTGTTCTCTCCGTGGACCGTTCCATTTCCTTTTCTGAGCTACTGGTGAAGCTAGGAGAGTTTTGTGGCTTAGCCGCAGTGACGCTTCGCTGTCAGTTGCCCACCGAAGATCTCGATGCTCTGGTATCTATCACCTCCGATGAAGATCTGGCGAATCTCATCGAGGAATATGATCTTGTTGCATCGCCGCCCTCGTCTTTAAAGATCAGAGCCTTCCTTTCGCCGCCGAAATCATTCCAGAAGAAGCTTTCTGTCCCTTCGTCATCGTCTTTATCAAAATCATCATCAACTTCATCTTCGTCGTCGTCTCGCAGTTCTACTGCTGCTGCTCCTGGTGGTTGTTCTGGTTTCGGCTGTAGCCGGACGTATTCGGTGATGGTGCCGCCGCTCGTGGACCGCTGCGTGCATCAGATGCCGGCGACGATGGCGTATTCGATTGGCATAAAAAAATCTTCTGGGAGTAATATTCCTCTTCCCTACTATGCTTCCCATGCGCAGGGAAATCCAGGCAATATGTGCCTCATCCATAGCGGGAACCAATGGCAATAG 663 0.5189 MVGPCQHPKSTIKFLCSYGGKILPRYPDRKLRYLGGQTRVLSVDRSISFSELLVKLGEFCGLAAVTLRCQLPTEDLDALVSITSDEDLANLIEEYDLVASPPSSLKIRAFLSPPKSFQKKLSVPSSSSLSKSSSTSSSSSSRSSTAAAPGGCSGFGCSRTYSVMVPPLVDRCVHQMPATMAYSIGIKKSSGSNIPLPYYASHAQGNPGNMCLIHSGNQWQ 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g0920 220 SUPERFAMILY CAD & PB1 domains 28 117 - -
Glsi05g0920 220 MobiDBLite consensus disorder prediction 118 148 - -
Glsi05g0920 220 CDD PB1_UP2 15 111 - -
Glsi05g0920 220 SMART PB1_new 26 112 IPR000270 GO:0005515
Glsi05g0920 220 PANTHER OS05G0427100 PROTEIN-RELATED 7 147 - -
Glsi05g0920 220 MobiDBLite consensus disorder prediction 117 151 - -
Glsi05g0920 220 Pfam PB1 domain 30 111 IPR000270 GO:0005515
Glsi05g0920 220 Gene3D - 30 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g0920 Glsi-ChrGlsi05 59409653 59410476 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g0920 13 111 MAP Kinase Kinase Kinase AT2G35050 53.535 5.88e-27 106