Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g0898 ATGACTACTTTGTTATTTAACTTGGTCATCGTTCCTTCGTTTGCTCGACGGCAGCCAGGCGAACAACAACAACCAACCAAACCCCAAGAACCTCCTGCTGGACAACCCCAACAACCTGTTGCCGGACTACCATTAAAACCTGCAGCCGGACAACCAAAACAATCTGCTGCTAGACAACCAAAACAACCTGCTATCGGACAACCAAAACAACCTGCTGCTGGACAACCACAACAACCTGAAGCTGGACAATCACTACAACCGGCTGCCGGACAACCCCAAAAACCTGCTGTCGGACAGCCGCAACAACCTGAAGCCAGACAACCACTACAACCTGCTGTTGGACAGCCACAACAACCGGCTGTCGGACAACCCCAACAGCCTGCTGCCGGACAACAACAACAACATGTCGGACCACAGCCTGTTATAGGACAACAGCAACCTGCTGTCGGGCAACCGCAACCTATTGCTGGACAAAACCCTGCTCTTGGTTCTATGTCGGGACTAGAACAAACTGTCTCACAACAACTTGTCGATACACTTCAGGAAGGATTCTACAACCAGAATTGCCCAAATGCTGAAAAAATTGTGGAGCAAGAAATGGCCCAGATTTTCAAGGCAAATCCAAACGGAATAGCTGCCATCCTTCGTCTTCTATTCCATGACTGCTTTGGATGCGATGCCTCCATTTTGTTAGACTCCATGGAAAGCGAGGAAAAGGTAGAGAAAAGTTCAAATATGAATGGTGAACTCCTCAAAGGTGTTGATTATATTGACGATATCAAAGAGAAGCTGGAGATGCAATGTCCACAAACAGTGTCATGTGCTGATATATTGGCATTTGCTGCTGAGGAATCTATGGTTTTAGCTGGTTTACCACGTCGCCCTAAGCTGGGTGGTCGCAGGGATGGAACAAATTCCCTTGCTATAAATGTAAACAACAATATACCTACGCCAACCTGGACGGTGGAACAACTGGTGCAGCTCTTCAAAAGGAAAGGCTTCAACGAGGAAGAAATGGTGATTCTAGCTGGTGGACATTCGCTTGGGGTGGCTCACTGTAATGTTTTTGCCGATAGAATATACAACTACAGTGATTCTGGGAAACCAGATCCTGATCTATCTCAAACCGCCGTTGGTGAACTCAGTAAACTATGCGCGAGACCAGGCTCAGAGGAGGCAAGAGCCAATCCAACTGTGAACTTCGATGAGACACCGACAAAACTTGATAATCTCTTCTACAAAGATCTAGTCGTAAAGAGGAAGGCATTGCTCGCTACGGATCAGGATTTGATCCTTGATCCCAGGACTGCTCCAATTGTGCACAAGTTGGCAGCGGATCCTGCATTGTTTCCAAAGAGGTTTGCTGAGTTAATGACTCGGATGAGTGCTTTAGATGTGCTTACGGGGAATAAAGGAGAGATAAGGAGGACTTGTAGGGCCACTAATTAA 1449 0.4707 MTTLLFNLVIVPSFARRQPGEQQQPTKPQEPPAGQPQQPVAGLPLKPAAGQPKQSAARQPKQPAIGQPKQPAAGQPQQPEAGQSLQPAAGQPQKPAVGQPQQPEARQPLQPAVGQPQQPAVGQPQQPAAGQQQQHVGPQPVIGQQQPAVGQPQPIAGQNPALGSMSGLEQTVSQQLVDTLQEGFYNQNCPNAEKIVEQEMAQIFKANPNGIAAILRLLFHDCFGCDASILLDSMESEEKVEKSSNMNGELLKGVDYIDDIKEKLEMQCPQTVSCADILAFAAEESMVLAGLPRRPKLGGRRDGTNSLAINVNNNIPTPTWTVEQLVQLFKRKGFNEEEMVILAGGHSLGVAHCNVFADRIYNYSDSGKPDPDLSQTAVGELSKLCARPGSEEARANPTVNFDETPTKLDNLFYKDLVVKRKALLATDQDLILDPRTAPIVHKLAADPALFPKRFAELMTRMSALDVLTGNKGEIRRTCRATN 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g0898 482 FunFam Peroxidase 316 461 - -
Glsi05g0898 482 Gene3D Peroxidase, domain 2 316 461 - -
Glsi05g0898 482 PRINTS Haem peroxidase superfamily signature 272 289 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi05g0898 482 PRINTS Haem peroxidase superfamily signature 338 353 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi05g0898 482 PRINTS Haem peroxidase superfamily signature 290 302 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi05g0898 482 PRINTS Haem peroxidase superfamily signature 401 416 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi05g0898 482 PRINTS Haem peroxidase superfamily signature 211 225 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi05g0898 482 CDD secretory_peroxidase 180 481 IPR033905 GO:0004601|GO:0042744
Glsi05g0898 482 MobiDBLite consensus disorder prediction 71 165 - -
Glsi05g0898 482 SUPERFAMILY Heme-dependent peroxidases 180 482 IPR010255 GO:0004601|GO:0006979|GO:0020037
Glsi05g0898 482 ProSiteProfiles Plant heme peroxidase family profile. 179 482 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi05g0898 482 MobiDBLite consensus disorder prediction 11 165 - -
Glsi05g0898 482 Gene3D - 183 482 - -
Glsi05g0898 482 ProSitePatterns Peroxidases proximal heme-ligand signature. 338 348 IPR019793 -
Glsi05g0898 482 PRINTS Plant peroxidase signature 337 349 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi05g0898 482 PRINTS Plant peroxidase signature 189 208 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi05g0898 482 PRINTS Plant peroxidase signature 271 281 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi05g0898 482 PRINTS Plant peroxidase signature 416 433 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi05g0898 482 PRINTS Plant peroxidase signature 213 233 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi05g0898 482 PRINTS Plant peroxidase signature 456 469 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi05g0898 482 PRINTS Plant peroxidase signature 290 305 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi05g0898 482 PRINTS Plant peroxidase signature 252 265 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi05g0898 482 PANTHER - 173 482 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi05g0898 482 Pfam Peroxidase 196 446 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g0898 Glsi-ChrGlsi05 59207408 59208958 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g0898 180 482 Peroxidase AT5G17820 42.484 1.65e-72 232