Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g0847 ATGTTAAAACCGCCTATAGCCATATCTGAAATTTCTGGCTCTAATACAATGAAGTTTCAATGGCAAAACTGCTTGATAATGATATTACTTCTCCTTTTGTGTAGCAACCTCGATCGAGTATGTTCTCAAACTCCTGCTGCTGATTGCATCCTTCATATTCAGTTTTCTAGATCCTTGAATAGCTCAAATTGTGAACTGCACAGTTGGGGAGGGTTGATGAATAGCTGTTGTGGATTAGATTTTGATGATTACCTATATGCATTAGGGCTTCATGCCAACCAATCTGGGAAAATATTCTTGAGTTCCTCAGAGCAAGAAACCTGCTTAGCATCAATGGTGAAAGTGTTTGAAAAAAATATTACAGGCTGTGGCATCGAGAAGCTAACCAGAGGAGCTGGTGGTTGCTCTGATTACACAGTCATAGATGTTATCAACAAGCTTGGAGACAAAATGAGAAGATTAGATGAAGATTGTATGCTTTTGAAAATGGATGGCAGAAGAACAGATGAGACTTGTACTGAATGTTTAAGAAGGTGGGAGGAGATTGGTGCAACTTCAGACAGTACGAGGGAATCAGAGTTAGCAAATAATGATGCCAATCTTTGTAGGTTTGCTGTACTAATATCCCTTACAAGCATCAGAAGTTATGATAGGGAATCCATTCAGGCAGTTTATGAATGTCTTGGGACACACAACCTTTCAGCAGTCACAGATAAGCAAGAAGGTAAAGCTAGTGGCAATTCTAAGCTCAACCCAGATTTGTTAAAGAATATGACGGCAACAGGTTTCTGGATGATATCATTTGGCTTAACTGGATTCACAATAATAGTGGTTCTTGCAGCATGGACCTTGTACAGAAAAAGAATTGCAAGTCCTCCAAAAGAAGAAGCTGATAATGAAGAATCAGCCTCTCTTAAGATAACTATCAAGGAAGTATATGTAGCGACTAACAATCTCAGTGCATCAAATTTCATTGGCCAAGGCATAGCTGATATGGCGGGTTTCAGCTCCAAGACAATGAGAAGTTATGCAGAGATATTATACACTAAAAAATTCAATAGTAATACTGAATTTACTGCAGAATGCAACAGAAAATGCAGAAACACAAAAGATAAACAAGGAAATTCAGATGAAATATCCATTAAGCCAAAACCTGTCAAATCAAGAGATAATTTTTCTCTCTCTTCTTTTTGGTTATTTACAGGGAAAGTGTACAAAGGTAAACTCTGCAACGGCCAGCATGTTGCCATCAAGCATATAAACAAAGAAGGGTACTTGGAGACATTCGTTAGAGAAGTGAGAAGCCTTTCCCACGTTAGACATCCAAACTTAGTATCTTTGCTTGGCTACTGTGAAAATGGAGATGAATGCTTTCTAGTGTATGAGCTATGCTACCAAGGAAACCTCTCAGAGTGGCTATTTGGAAAAGATAAAATTCTTTCATGGATTCAAAGACTAGAGATTGCAGTTGAAAGTGCAAGAGGTCTAGTGTTTCTCCACACCTACCCAAGTGGTTGCATTATTCACCGAGATATCAAGCCATCAAACATTCTCATTGACACAAACTTGCGAGCAAAACTTTCAGATTTTGGGTTGTCCAGGGTTATGGAACTGGATCAATCTTATGTGAGCTCTGAAGTTAGAGGAACATTAGGTTATATTGATCCTGAATACCGGAGAAACCACCATGTGAATGCCTCAGGAGATGTCTACAGTTTTGGGATGGTTTTACTGCAACTTCTATCAGGACAGAGGGTTATTAACTTCAATTTCCAGAGACCAATGTCCCTAAATAAAATGGCCAGAAATTTTGCTGGAGGTGGTGATACATCAAAATTTGCTGACCCTAAACTCAATGGGGAGTACTCAGGGGAAGCATTTGGCGTCACACTAAAGCTAGCTTTGTCATGCATAGGACTCAAGCAGCAAAGACCATCTATGAAGCAAGTGTTAAGTAGCCTAGAAAAGGCACTGGAAATCTCATTACAAGCTAAATCATTTACATCTTATACAATGCATGATACAATCTTATCTGATAAAATTCAGATGAATAAATTGCGATACTCTATACGAGCTTCATCATTAAAACCGAAGCTGATACAAATGTTAGCTCTTCAAAACACGAGCTAA 2130 0.3864 MLKPPIAISEISGSNTMKFQWQNCLIMILLLLLCSNLDRVCSQTPAADCILHIQFSRSLNSSNCELHSWGGLMNSCCGLDFDDYLYALGLHANQSGKIFLSSSEQETCLASMVKVFEKNITGCGIEKLTRGAGGCSDYTVIDVINKLGDKMRRLDEDCMLLKMDGRRTDETCTECLRRWEEIGATSDSTRESELANNDANLCRFAVLISLTSIRSYDRESIQAVYECLGTHNLSAVTDKQEGKASGNSKLNPDLLKNMTATGFWMISFGLTGFTIIVVLAAWTLYRKRIASPPKEEADNEESASLKITIKEVYVATNNLSASNFIGQGIADMAGFSSKTMRSYAEILYTKKFNSNTEFTAECNRKCRNTKDKQGNSDEISIKPKPVKSRDNFSLSSFWLFTGKVYKGKLCNGQHVAIKHINKEGYLETFVREVRSLSHVRHPNLVSLLGYCENGDECFLVYELCYQGNLSEWLFGKDKILSWIQRLEIAVESARGLVFLHTYPSGCIIHRDIKPSNILIDTNLRAKLSDFGLSRVMELDQSYVSSEVRGTLGYIDPEYRRNHHVNASGDVYSFGMVLLQLLSGQRVINFNFQRPMSLNKMARNFAGGGDTSKFADPKLNGEYSGEAFGVTLKLALSCIGLKQQRPSMKQVLSSLEKALEISLQAKSFTSYTMHDTILSDKIQMNKLRYSIRASSLKPKLIQMLALQNTS 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g0847 709 Gene3D Phosphorylase Kinase; domain 1 388 463 - -
Glsi05g0847 709 Gene3D Transferase(Phosphotransferase) domain 1 465 676 - -
Glsi05g0847 709 FunFam probable receptor-like protein kinase At5g59700 464 673 - -
Glsi05g0847 709 Pfam Protein kinase domain 401 588 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi05g0847 709 Pfam SPARK 45 192 IPR043891 -
Glsi05g0847 709 SUPERFAMILY Protein kinase-like (PK-like) 402 654 IPR011009 -
Glsi05g0847 709 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 401 656 - -
Glsi05g0847 709 ProSiteProfiles Protein kinase domain profile. 386 658 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi05g0847 709 ProSitePatterns Serine/Threonine protein kinases active-site signature. 507 519 IPR008271 GO:0004672|GO:0006468
Glsi05g0847 709 SMART serkin_6 402 661 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g0847 Glsi-ChrGlsi05 58848195 58851864 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g0847 402 665 Receptor kinase-like Gene Family AT1G51890 41.697 1.88e-56 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-2 Glsi05g0847 Pkinase 7.6e-39 CL0016