Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g0845 ATGGAGTACCAGCAGCAGCGGGGTAGCCTCTGGCTCCGCCTTCATGTTCATCACCTTCGTCTTGATCACATCCACCGGGTTCGACGCCACCACAGCGATAGCCTCTGGCTCCGCCTTCATGTTTCTCGCCCTGAAGCTGCATGCAAACTTTTATCAGATCAAGAGGATGAGTTGTGCAGCCGGCAACAACGGAAGCAATGCCCCGCAAGCCTGAGATCCTATCCCCCAGCATTCTCGACTTCCCTTCACTGGTTCTCAGCATTCTCGGCTTGGCAGATTAGCAACGACGATATTTGGGCTCTGTCTCAAGCGGATACTCATTGCCTGAAAATAAACTCTCTAGGTGGGACTGCTTACCTGGTTAGAGGGCTCAGTAAATGCAGTAATGCTGTTGCCATTGAAGAACCACTTAAACCAATAGTTGAGGTGGAAAAAACCCAGCTCTTAATTGATGGACAATTCGTCGATGCTGCTTCTGGGGAAGTGATTGCTTATGTTGCTGAGGGAGATTCTGAAGATGTTAATCGAGCAGTTGCTGCTGCACGCAAGGCGTTCGATGAAGGGCCTTGGCCAAGGATGGCAGCCTATAAAAGCATAATGATGAGCTTGCGGCACTTGAGACTTGATAATGGGAAGCCATATGAACAATCTGCTCAAATTGAAGTTCCATTGCTAGTTCGGCTATTTCGATATTATGCTGGTTGGGCAGATAAGATTCATGGTCTCACAGTTCCAGCTGATGGGCCATTTCATGTGCAGACATTGCACGAACCGATTGGTGTGGCTGGGCAGATCATTCCATGGAATTTCCCTCTTCTCATGTTTGCTTGGAAGGTTGGGCCTGCATTAGCCTGTGGCAACACTGTTGTTCTTAAAACTGCTGAGCAGACACCATTATCAGCATTGTATGCATCAAAGCTATTTCATGAGGCTGGACTTCCTTCTGATGTTTTAAATGTAGTATCTGGCTATGGCCCAACTGTTGGTGCTGCTCTGGCTAGTTCACATGAAGATCAGGCCGTAGAGCTAGCACACTTTGCATTATTCTTTAATCAGGGACAATGCTGTTGTGCTGGGTCTCGTACGTTTGTACATGAACGTGTGTACGATGAGTTGGTTGAGAAAGCAAAGTTGCGTGCTTTGAAACGAGCTGTTGGTGATCTATTCAAGGTTGGAATAGAGCAAGATCCTCAGATTGATTCAGCACAATTTGACACAAAACTAAGGTATATCAGATCTGGGGTTGAAAGTGGAGCTACTCTTGAAACTGGAGGAGAGAGACTTGGTGACAAGGGCTTCTATATCGAGCCTACTGTGTTCTCCAATGTTCAGGATGGCATGCTGATTGCCAAGGAAGAGATCTTTGGTCCAGTGCAATCTATATTGAAATTCAAGGACCTTGATGAGGTGATTCAAAGAGCAAATAACACACACTATGGCCTTGCAGCAGGGGTGTTTACGAAGAACTTGGACACAGCTAACAAGCTGAGTCGAGAATTGCGAGTGGGAGCAGTGTGGATAAATACCTTTGATGCTGCAATTCCTTTTGGTGGGTACAAGATGAGGGGGCAGGGCAGAGAAAAAGGAATTTACTGTCTTCACAACTACTTGCAGGTGAAGGCTGTTGTAATTCCCTTGCTGAACCCAGCCTGGCTTTGA 1659 0.469 MEYQQQRGSLWLRLHVHHLRLDHIHRVRRHHSDSLWLRLHVSRPEAACKLLSDQEDELCSRQQRKQCPASLRSYPPAFSTSLHWFSAFSAWQISNDDIWALSQADTHCLKINSLGGTAYLVRGLSKCSNAVAIEEPLKPIVEVEKTQLLIDGQFVDAASGEVIAYVAEGDSEDVNRAVAAARKAFDEGPWPRMAAYKSIMMSLRHLRLDNGKPYEQSAQIEVPLLVRLFRYYAGWADKIHGLTVPADGPFHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTVVLKTAEQTPLSALYASKLFHEAGLPSDVLNVVSGYGPTVGAALASSHEDQAVELAHFALFFNQGQCCCAGSRTFVHERVYDELVEKAKLRALKRAVGDLFKVGIEQDPQIDSAQFDTKLRYIRSGVESGATLETGGERLGDKGFYIEPTVFSNVQDGMLIAKEEIFGPVQSILKFKDLDEVIQRANNTHYGLAAGVFTKNLDTANKLSRELRVGAVWINTFDAAIPFGGYKMRGQGREKGIYCLHNYLQVKAVVIPLLNPAWL 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g0845 552 Pfam Aldehyde dehydrogenase family 338 542 IPR015590 GO:0016491
Glsi05g0845 552 Pfam Aldehyde dehydrogenase family 155 335 IPR015590 GO:0016491
Glsi05g0845 552 SUPERFAMILY ALDH-like 141 548 IPR016161 GO:0016491
Glsi05g0845 552 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 349 360 IPR016160 GO:0016491
Glsi05g0845 552 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 338 542 - -
Glsi05g0845 552 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 138 347 IPR016162 GO:0016491
Glsi05g0845 552 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 450 549 IPR016162 GO:0016491
Glsi05g0845 552 FunFam Aldehyde dehydrogenase, mitochondrial 142 354 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g0845 Glsi-ChrGlsi05 58839651 58843985 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g0845 128 552 Aldehyde Dehydrogenase Gene Family AT3G48000 62.725 0.0 628