Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g0840 ATGGCTGCGAAGTCTCCACCAAAAGAAGAAAAGAGTTGTACCAAATATTTAGAATATGACTTGCGTTTCCGCAATTGGGTCTTTATTAAAGCATTTGATTTCAGTGGCAATGGTTCTATTAGATTTCTAAGAGCACTTGTTATGGATCTGGAAAGTGGGATTAATCAAAACTCTGCTCAGAAACAATCATGGAAGACGATTCTGACTCTGGCATATCAGAGCCTTGGAGTAGTCTATGGAGATTTAAGCACTTCACCCCTGTACGTTTACAGAAGCACATTTGCCGAAGACATTGAACACGCAGAGACCAACGAAGAAATTTACGGTGTTTTGTCGTTGGTGTTCTGGACTTTCACATTGGTTCCTCTGATTAAATACGTGTTTATCGTCCTCAAAGCTGACGACAATGGCGAAGGAGGCACATTTGCTCTATACTCGTTGCTTTGTCGCCATGCTCGAGTCAGTTCACTACCCAATTGCCAGGTGGCAGACGAAGAGCTCTCGGAGTACAAGAAAGATTCTTCTGGTGTGGCACCGGAAAGAAGCTTTGCCTCGAGGTTGAAGACGACGTTCGAGAAACACCGAGTTTTACAGAGGGTTTTGCTGGTTCTATCTTTGATTGGGACTTGCATGGTGATTGGTGATGGTGTCCTCACACCGGCTCTTTCTGTTTTCTCTGCGGTGTCTGGCCTCGAGCTTTCAATGTCCAAGGAGCATCACCGATATGTAGAAGTTCCAGCTGCATGCATCATACTGATAGGCTTGTTTGCCCTTCAACATTATGGCACGCACAGGGTTGGCTTCTTGTTCGCTCCTATAGTTATCACATGGCTTCTCTGCATCAGTGCTATTGGCGTATATAATATATTTTACTGGAATCCTTATGTATATCAAGCGCTCTCTCCATATTACGTTTTCCAGTTTTTAAGGAAAACTCAAGGAGGAGGTTTTATGTCTCTTGGTGGAATTTTGTTGTGCATAACAGGATCTGAAGCCATGTTTGCTGATCTCGGGCACTTTTCACAACTATCAATTAAGATTGCATTCACCTCTGTGGTTTATCCATCTTTAATTCTTGCATATATGGGGCAAGCTGCTTATCTCTCTAAAAACCATAACGTTGCCTATGAGTATCATTTTGGTTTCTACGTATCTGTACCAGAGAAATTGAGATGGCCAGTTCTGATTATAGCCATACTTGCTGCAGTTGTGGGAAGCCAAGCCATCATCACTGGAACTTTCTCAATCATCAAGCAGTGTTCTGCATTGAGTTGTTTCCCAAGAGTTAAAGTGGTGCACACATCATCCAAAATTCACGGCCAAATATATATCCCCGAGATCAATTGGCTATTGATGTCCCTGTGCTTGGCTGTAACTATTGGTTTCAGAGACACGAAGCGCTTGGGTAATGCATCAGGTTTGGCAGTTATTACAGTTATGCTGGTCACCACTTGTTTGATGTCACTGGTTATTGTACTGTGCTGGCACAGGAGCTTTCTCCTTGCTCTTGGATTTGTTGCTATATTTGGCACCATTGAGGCTCTCTTCTTCTCAGCTTCTCTTATCAAATTCCTAGAAGGAGCATGGGTTCCCATTGCTTTTGCATTCGTATTCCTAACTGTCATGTACATTTGGCACTATGGCACCCTCAAGAAGTATGAATTTGACCTTCAAAACAAGGTCTCCATTAATTGGCTTCTCAGTGTAGGTTCCAGCATAGGCATTGTTCGACTTCGTGGCATTGGCTTAATACAGACCGAGCTAGTCTCTGGAATTCCTGCCATCTTCTCCCACTTTGTGACCAACCTTCCAGCCTTCCACCAGGTCTTAGTCTTTCTCTGTATCAAACATGTGCCAGTTCCTCATGTTGCACCTAAGGAACGGTTCCTAGTGGGCCGGATAGGTCCGAGAGATTTCAGAATCTACCGGTGCATAGTGCGATATGGATATCGTGATGTGCACAAAGATGATATCAAGTTTGAGAATGATCTAGTGTGCAGCATAGCAGAGTTCATACGCACTGGAAGTTCCGAGTCCAATGCTGCTTCAAGTGAAGAGCTTAAAAAGGATGAGAAAATGGCAGTGGTTGGGACATGTTCTACTCATGCCATTTTGATGAGTGAGGATAATGTAGAAGAATCTGCCGGGACATCAGAGGTTAGCGAGATAAAGTCATCGCCCAAGTTGATCAAAGCAAAGAAAAGGGTAAGATTTGTTGTCCCAGAGAGTCCGAAGATTGATACTGGTGCAAGGGAAGAGTTGGATGATCTGGTGGAAGCAAGAGAAGGTGGGGTGGCTTACATTATAGGGCAGTCCTATATGAGAGCCAAAGCAGGGTCAAGTCTGCTGAAGAAATTGGTTATTAATATTGGGTATGAATTCTTGAGGAAGAATAGTAGGGCACCCTCCTTTGTCCTTAATGAACCTCATGCATCATGTCTGGAAGTTGGGATGATGTACCAAGTTTAG 2469 0.4362 MAAKSPPKEEKSCTKYLEYDLRFRNWVFIKAFDFSGNGSIRFLRALVMDLESGINQNSAQKQSWKTILTLAYQSLGVVYGDLSTSPLYVYRSTFAEDIEHAETNEEIYGVLSLVFWTFTLVPLIKYVFIVLKADDNGEGGTFALYSLLCRHARVSSLPNCQVADEELSEYKKDSSGVAPERSFASRLKTTFEKHRVLQRVLLVLSLIGTCMVIGDGVLTPALSVFSAVSGLELSMSKEHHRYVEVPAACIILIGLFALQHYGTHRVGFLFAPIVITWLLCISAIGVYNIFYWNPYVYQALSPYYVFQFLRKTQGGGFMSLGGILLCITGSEAMFADLGHFSQLSIKIAFTSVVYPSLILAYMGQAAYLSKNHNVAYEYHFGFYVSVPEKLRWPVLIIAILAAVVGSQAIITGTFSIIKQCSALSCFPRVKVVHTSSKIHGQIYIPEINWLLMSLCLAVTIGFRDTKRLGNASGLAVITVMLVTTCLMSLVIVLCWHRSFLLALGFVAIFGTIEALFFSASLIKFLEGAWVPIAFAFVFLTVMYIWHYGTLKKYEFDLQNKVSINWLLSVGSSIGIVRLRGIGLIQTELVSGIPAIFSHFVTNLPAFHQVLVFLCIKHVPVPHVAPKERFLVGRIGPRDFRIYRCIVRYGYRDVHKDDIKFENDLVCSIAEFIRTGSSESNAASSEELKKDEKMAVVGTCSTHAILMSEDNVEESAGTSEVSEIKSSPKLIKAKKRVRFVVPESPKIDTGAREELDDLVEAREGGVAYIIGQSYMRAKAGSSLLKKLVINIGYEFLRKNSRAPSFVLNEPHASCLEVGMMYQV 822
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g0840 822 NCBIfam potassium uptake protein 70 822 IPR003855 GO:0015079|GO:0016020|GO:0071805
Glsi05g0840 822 Pfam K+ potassium transporter 72 652 IPR003855 GO:0015079|GO:0016020|GO:0071805
Glsi05g0840 822 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 58 821 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g0840 Glsi-ChrGlsi05 58793446 58801007 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g0840 48 822 Inorganic Solute Cotransporters AT1G70300 75.510 0.0 1216
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi05g0840 05 58793446 58801007 Glsi09g1079 09 7533004 7538441 CCT
Glsi09g1078 09 7513583 7524559 Glsi05g0840 05 58793446 58801007 CCT
Glsi05g0840 05 58793446 58801007 Glsi05g0840 05 58793446 58801007 ECH