Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g0831 ATGCTGGGCGTTGGGATGACAATGGCGATGGTTGCAGCCCAGTTCTTGGAAGTGGGGTTGAACACTCTGGTCAAGGCAGCCACCACCACTGGGATGAGTAAATATGTTTTCATCGTGTATTCGAATGCCTTGGCCCTCTGTTTCCTTCTACCATCTACCCTCCTCTATCACAGAAACAGAGCTCCTCCCCCAATCACAAGATCAATCGTCTGCAGAATATTTTTTGTTAGCTTGCTCAGCTGTGCAGTGCAGACATTGATGTATACTGGTATTGGATTTAGCTCTCCTACTTTGGCCTCAGCTATGGTGGATCTTGTTCCAGCTTTTACCTTCATACTTGCCATTGTTTCCAGGATGGAAATTATGGATTTGAAACTACAAAGCAGCCAGGCAAAATGTATTGGTACTGTGGTCTCAATCATAGGGGCATTAATTGTGACCTTATACAAAGGTCTGCCAATTACTATTGGGTCCCTACCGGATCAGCAACTGAATGGGGTTACACTCTCACAGCAATCAAACTGGCTATTTGGAGGCTTTCTCCTTGCAGTTGCAAGCTTTTGTCTCTCAGTCTTGATTGTTGTCCAGACTTCGGTTATCAAGGACTATCCTGCAGAGCTAATGCTAACAACCATTTGTTGCAGTTTTGTGGTCATTCTATCTGCCATAGTAGCTATCATTGCGGAAGGAAATCCAAAAGCTTGGATAATCAGGCCAGATATAGAATTGGTAGCTATAATTTATTCAGCAATTTTTGTGGTATCAATGCGAAGTGTTGTCTATCAATGGGCAAGTCGTAAGAAGGGGGCAATTTATGTTGCTATGTTTAATCCTTTAGGGATGGTGATTGCAGTTGGGATGGGGGTCATATTTCTGGGAGATACTCTTTATCTTGGAAGCATGATAGGAGCTGCTATAATAGCTATTGGGTTTTATGCTGTGATATGGGGGCTGTCTCAAGAGGAAAAAATGGTCGACGAGAAGCGTGAAATCTCTAGCTCTGCCTCATCTTCTGCAGCACCTCTGCTGCAGAACAATAGGCTCGATAGTGGGTCCAAAGCAGAGCAAAGACGGAGTCTAAGGCAGGGAGAAATGCTGGGTGTAGGGATAACATTGGCTATGGTTGCAACCCAGTTCTTGGAAGTGGGGTTGAACACTCTGGTGAAGGCAGCCACCACCCGTGGGATGAGTAAATTTGTTTTCATTGTGTATTCGAACACCTTGGCCCTCTGTTTCCTTCTACCATCTACCCTCCTCTATCACAGAAAGAGAGCTCCTCCTCCAATCACAAGCTCAATTATCTGCAGAATGTCTCTTGTTAGCATGCTCAGCTGTGCAGGGCAAACATTGTTCTATACTGGTATTGAATTTAGCTCTCCCACTTTGGCCTCAGCTATGGTGGATCTTGTCCCAGCTTTTACCTTCATACTTGCCATTGTTTCAAGGATGGAGAATCTGGATTTGAAGCTACGTAGCAGTCAGGGAAAAGGCATAGGTGCTGTGGTCTCAATCACAGGGGCATTAATTGTGACCTTATACAAAGGTCTGCCGCTTAGTATTGGGTCCCTACCAGATAAGCAACTCAATGGGGTTTTACTCTCACAGCAATCCAACTGGCTATTCGGAGGCTTTCTCCTTGCAATTGCAAGCTTTTGTGTCTCAGTCTTGATTGTTGTCCAGACCACGGTTATCAAGGACTATCCTGCAGAGCTCATGGTAACAACCATTTGTTGCAGTTTTGTGGTCATTCTATCTGCCATAGTAGCTATCATTGCGGAGGGAAATCCAAAAGCTTGGATACTCAGACCAGATATGGAGTTAGTAGCTATATTTTATTCAGCAATATTTCTGGTATCATTTCGAAGTGTTGTGCATGCATGGGCAAGTCGAAAGAAGGGGGCAGTTTATGTTACTATGTTTAATCCTTTAGGGATGGTGATTGCAGTTGGAATGGGCGTCATATTTCTGGGAGACACTCTTTATCTAGGAAGCATGATAGGAGCTGCTATAATAGCTATTGGGTTTTATGCTGTGATGTGGGGGATGGCTTATGAGGAAAAAATGGTCAATGAGAAGCATGAAATCTCTAGCTGTGTCTCATCTTCTGCAGCACCTCTGCTGCAGAACAAAAGCTTGGATCTGTAG 2145 0.4434 MLGVGMTMAMVAAQFLEVGLNTLVKAATTTGMSKYVFIVYSNALALCFLLPSTLLYHRNRAPPPITRSIVCRIFFVSLLSCAVQTLMYTGIGFSSPTLASAMVDLVPAFTFILAIVSRMEIMDLKLQSSQAKCIGTVVSIIGALIVTLYKGLPITIGSLPDQQLNGVTLSQQSNWLFGGFLLAVASFCLSVLIVVQTSVIKDYPAELMLTTICCSFVVILSAIVAIIAEGNPKAWIIRPDIELVAIIYSAIFVVSMRSVVYQWASRKKGAIYVAMFNPLGMVIAVGMGVIFLGDTLYLGSMIGAAIIAIGFYAVIWGLSQEEKMVDEKREISSSASSSAAPLLQNNRLDSGSKAEQRRSLRQGEMLGVGITLAMVATQFLEVGLNTLVKAATTRGMSKFVFIVYSNTLALCFLLPSTLLYHRKRAPPPITSSIICRMSLVSMLSCAGQTLFYTGIEFSSPTLASAMVDLVPAFTFILAIVSRMENLDLKLRSSQGKGIGAVVSITGALIVTLYKGLPLSIGSLPDKQLNGVLLSQQSNWLFGGFLLAIASFCVSVLIVVQTTVIKDYPAELMVTTICCSFVVILSAIVAIIAEGNPKAWILRPDMELVAIFYSAIFLVSFRSVVHAWASRKKGAVYVTMFNPLGMVIAVGMGVIFLGDTLYLGSMIGAAIIAIGFYAVMWGMAYEEKMVNEKHEISSCVSSSAAPLLQNKSLDL 714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g0831 714 PANTHER WAT1-RELATED PROTEIN 7 329 IPR030184 GO:0016020|GO:0022857
Glsi05g0831 714 SUPERFAMILY Multidrug resistance efflux transporter EmrE 594 681 - -
Glsi05g0831 714 SUPERFAMILY Multidrug resistance efflux transporter EmrE 228 317 - -
Glsi05g0831 714 Pfam EamA-like transporter family 5 147 IPR000620 GO:0016020
Glsi05g0831 714 Pfam EamA-like transporter family 369 511 IPR000620 GO:0016020
Glsi05g0831 714 Pfam EamA-like transporter family 541 679 IPR000620 GO:0016020
Glsi05g0831 714 Pfam EamA-like transporter family 177 315 IPR000620 GO:0016020
Glsi05g0831 714 SUPERFAMILY Multidrug resistance efflux transporter EmrE 407 514 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g0831 Glsi-ChrGlsi05 58688444 58695223 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g0831 358 713 Nodulin-like Gene Family AT3G28050 45.135 7.45e-85 271