Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g0822 ATGCCGGTTTCCTGCTCCGATGACTACTTTTGCGACTTCGACCTTCTTTGCAGCGAGGACACCTCCGGAATCTCGTCCGAAGAGTCGCCGGAATGCTCCTCTGACCTCGATTCCAAGCCGGTGTTTCTGGAGGAGTCGATAGCCGGGTTCATCGAGGAGGAGCGCAACTTCGTTCCTGGATTCGACTACTTGTCGAGGTTTCAATCTCACTCGCTCGACGCCTCAGCCAGAGAAGAATCTGTTGCATGGATTCTCAAGGTTCAAGCGTATTATGGTTTCCAGCCGCTGACGGCGTATCTATCCGTCAACTATTTGGATCGGTTTTTGGATTCTCGGCAGTTGCCTCAAACAAATGGGTGGCCGATGCAACTTTTATCTGTTGCTTGTTTGTCTTTAGCTGCAAAGATGGAGGAACCTTTAGTTCCGCCCCTCCTGGATCTTCAGGTAGAAGGTGCCAAATATATATTTGAGCCTAGAACAATTTGTAGGATGGAACTACTTGTTCTGAGTGTGTTGGATTGGAGGCTAAGATCAGTGACACCATTCAGCTTCCTCGGTTTCTTTTCGTGCAAGCTCGATTCAACTGGAACTTATTCTGGGTTTCTCATTTCCCGGGCTACAGAAATAATCTTATCTAATATCCAAGAGGCTAGCTTTCTTGCGTACTGGCCATCATGCATTGCAGCCGCGGCAATACTTTGCGCAGCTAATGAAATTCCTAATTGGTCTCTTGTTAAGCCCGAACATGCTGAGTCATGGTGTGAGGGACTAAGAAAAGAGAAAATTATAGGATGCTACCAGTTGATGCAAGAACTTGTGGTAGACAATAACCGGAATCCCCCTAAAGTCTTACCCCAGCTTCGAGTAACAATTCGACCCAGAATGAGGTCAAGTATCTTATCATTGTCATCGACTTCCTCCTCTTCCTCCTTCTCATCGTCTTATAAAAGAAGGAAATTAAATAATTGCCTGTGGGTGGAAGATGACAAAGAAAACCTGCCAGTGAAGAGACAATAA 1017 0.4621 MPVSCSDDYFCDFDLLCSEDTSGISSEESPECSSDLDSKPVFLEESIAGFIEEERNFVPGFDYLSRFQSHSLDASAREESVAWILKVQAYYGFQPLTAYLSVNYLDRFLDSRQLPQTNGWPMQLLSVACLSLAAKMEEPLVPPLLDLQVEGAKYIFEPRTICRMELLVLSVLDWRLRSVTPFSFLGFFSCKLDSTGTYSGFLISRATEIILSNIQEASFLAYWPSCIAAAAILCAANEIPNWSLVKPEHAESWCEGLRKEKIIGCYQLMQELVVDNNRNPPKVLPQLRVTIRPRMRSSILSLSSTSSSSSFSSSYKRRKLNNCLWVEDDKENLPVKRQ 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g0822 338 SMART Cyclin_C_2 179 309 IPR004367 -
Glsi05g0822 338 SUPERFAMILY Cyclin-like 161 274 IPR036915 -
Glsi05g0822 338 SMART cyclin_7 82 170 IPR013763 -
Glsi05g0822 338 CDD CYCLIN_AtCycD-like_rpt2 179 269 - -
Glsi05g0822 338 SUPERFAMILY Cyclin-like 39 176 IPR036915 -
Glsi05g0822 338 PANTHER CYCLINS 51 276 IPR039361 -
Glsi05g0822 338 FunFam D2/4-type cyclin 60 177 - -
Glsi05g0822 338 Pfam Cyclin, C-terminal domain 179 280 IPR004367 -
Glsi05g0822 338 Pfam Cyclin, N-terminal domain 49 176 IPR006671 -
Glsi05g0822 338 Gene3D - 60 177 - -
Glsi05g0822 338 Gene3D - 51 240 - -
Glsi05g0822 338 CDD CYCLIN_AtCycD-like_rpt1 76 174 - -
Glsi05g0822 338 ProSitePatterns Cyclins signature. 77 108 IPR006671 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g0822 Glsi-ChrGlsi05 58635015 58637361 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g0822 1 329 Core Cell Cycle Gene Families AT1G70210 64.264 1.97e-138 394