Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g0809 ATGACGTTTCGCTTCCTCTTGTTCCTCCTCCTCTGCCTCGCATTCCTTCCCTTGATTCAATCCACGCTCAACGCCAACTACTACCAGAAATCATGCCCAAAATTCTCGGAAATCGTCAAACGAACGGTGACGGAGAAGCAGCTATCTTCGCCCACCACCGCCGCCGCCACTCTCCGCCTCTTCTTCCACGACTGCATGCTGGGAGGCTGCGACGCCTCCGTTCTCATCTCCTCCAACGTCTACAACAAAGCCGAGCGCGACGCCGACATCAACCTCTCCCTCCCCGGCGACGGCTTCGACGTCATCGCGCGCGCCAAGACCAACCTCGAGCTGCAATGCCCCGGCGTCGTCTCCTGCGCCGATATACTCGCCGAGGCGACGCGTGACTTGGTCGTCATGGTCGGTGGGCCCTTCTACGAGGTCCGTCTCGGCAGAAAAGACGGATTCGAATCACTGGCAGAAAAAGCAGAAACCAAATACCCAAAACCCACAATGCCGTTATCCCAAATCATATCGATATTCGCATCGAACGGGTTCTCCGTACAAGAAACGGTGGCATTGGTGGGTGCTCATACCATAGGGTTCTCGCACTGCAAAGAGTTCAGCAATAGGCTCTTCAATTTCAGCAAGAACTCGGAGTACGATCCAGCGTACAACCCAGAATACGCAGAAGGGTTGAGGAAGGTGTGTGCGAATTACACGAAGGATCCAAGCATGAGTGCTTTCAACGACGTGATCACTCCGGGGAAGTTCGATAATATGTATTACAGGAATTTGCAGAGAGGGTTGGGGTTGCTGGCATCGGACAACGCGTTGTGGGTGGATGCGAGGACGAAGCCATTTGTGAATATGTATGCGGCGAATCAAACCAAGTTCTTCCAAGATTTTGCTCATGCGATGCAGAAGGTTAGCGTAATGCAGATTAAGACGGGGAAGAAAGGAGAGGTACGTCACAAATGCGATTCTTTCAACACGCTTATTGTAGAGAAGAAGTTTAGCATAAAAACAGATACAATTGCAGTTTGA 1026 0.5185 MTFRFLLFLLLCLAFLPLIQSTLNANYYQKSCPKFSEIVKRTVTEKQLSSPTTAAATLRLFFHDCMLGGCDASVLISSNVYNKAERDADINLSLPGDGFDVIARAKTNLELQCPGVVSCADILAEATRDLVVMVGGPFYEVRLGRKDGFESLAEKAETKYPKPTMPLSQIISIFASNGFSVQETVALVGAHTIGFSHCKEFSNRLFNFSKNSEYDPAYNPEYAEGLRKVCANYTKDPSMSAFNDVITPGKFDNMYYRNLQRGLGLLASDNALWVDARTKPFVNMYAANQTKFFQDFAHAMQKVSVMQIKTGKKGEVRHKCDSFNTLIVEKKFSIKTDTIAV 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g0809 341 FunFam Peroxidase 26 166 - -
Glsi05g0809 341 Pfam Peroxidase 42 288 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi05g0809 341 ProSitePatterns Peroxidases proximal heme-ligand signature. 183 193 IPR019793 -
Glsi05g0809 341 PRINTS Haem peroxidase superfamily signature 54 68 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi05g0809 341 PRINTS Haem peroxidase superfamily signature 117 134 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi05g0809 341 PRINTS Haem peroxidase superfamily signature 244 259 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi05g0809 341 PRINTS Haem peroxidase superfamily signature 183 198 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi05g0809 341 PRINTS Haem peroxidase superfamily signature 135 147 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi05g0809 341 PRINTS Plant peroxidase signature 56 76 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi05g0809 341 PRINTS Plant peroxidase signature 116 126 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi05g0809 341 PRINTS Plant peroxidase signature 258 275 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi05g0809 341 PRINTS Plant peroxidase signature 135 150 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi05g0809 341 PRINTS Plant peroxidase signature 182 194 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi05g0809 341 PRINTS Plant peroxidase signature 242 257 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi05g0809 341 PRINTS Plant peroxidase signature 298 311 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi05g0809 341 PRINTS Plant peroxidase signature 32 51 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi05g0809 341 PRINTS Plant peroxidase signature 97 110 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi05g0809 341 Gene3D - 26 324 - -
Glsi05g0809 341 Gene3D Peroxidase, domain 2 161 303 - -
Glsi05g0809 341 ProSitePatterns Peroxidases active site signature. 54 65 IPR019794 GO:0004601
Glsi05g0809 341 PANTHER - 3 324 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi05g0809 341 SUPERFAMILY Heme-dependent peroxidases 23 324 IPR010255 GO:0004601|GO:0006979|GO:0020037
Glsi05g0809 341 FunFam Peroxidase 161 303 - -
Glsi05g0809 341 CDD secretory_peroxidase 23 323 IPR033905 GO:0004601|GO:0042744
Glsi05g0809 341 ProSiteProfiles Plant heme peroxidase family profile. 22 324 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g0809 Glsi-ChrGlsi05 58530920 58531945 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g0809 9 328 Peroxidase AT5G47000 59.877 2.20e-143 407