Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g0782 ATGGCTTCCATTGTCCTGTCATGGCTTCTTTTGAGCCTTCTCTTGGTTTTCCAGATTTTTGTTATACCAATCTGCCATTGCCAGAATCAGAATATAGAAACCTTCTACCCAGGTGAACCTCCTGCCCCATCTCTTGCACCCATTTCTCCAACACAACCGCCAGAGCCGCTGCCACCACCGTCACGAGAAGAGCGGGCTCCGGCACCGGTTGGAGTATCCGGAAGTTCTTCATCCAACAGTAAGATAGCAACGGCAGTGGCTGCAACTGCAGCAAGCACTCTAGTTGTTTCTGGGTTAATTTTCTTTTTGATTCGAAGGTATATGAGAAAAGGGCGCAGAAGGGAGATAGCTAATACTAGCTCTGCTTCTCCAGGGGATCATAGGCGTGTTGTGCCTCAGACAAACGTGTTTGAGCGGATTGATGGGCATGTGAGGGGGTTGATTGTTGATGAGAACGGTTTGGATGTGGTTTATTGGAGAAAGCTTGAAGGGAAGAACTCCAAGAAGGGTCTCCAGAAAGAGGTCAGACGTAGTGTTAGAAAGAAAGAACAAGAACAAGAAGACGAGGAAGAAGAAGATGGTTATAAAGGAAATCATGGGAAAAGATCAGAGCCCATTCCAGAAATTCCTCTGCTTCGAGGGAAGTCTTCGGCTTCCCACATGAGTATATTATCAGATGATGGGGTTGATTCAAATGGAATCACGAGGAGAACTATGTCAAGGACTACCCCACCACCACCACCACCTCCACCTCCACCTCCACCTCCTGCTTCAGCACCACCGCTTCCGCCGCCGCCGCCACCCCCAACACCACCACCACCTTCCGCTTCTTCATCTGCTATTCCAAAAATGAACAGCTCTGCATCACCACCTCCCCCTCCGCCAAGCACAAACAGCAAGAGTCCAGCCCCTCCTCCTCCTCCTCCTCCGCCTAACGTAGCTAGAAAGAATCCAGCACCGCCTCCTCCTCCGCCCTTGACAGGTAATTTGAGGTCATCCTCAAAACCACCACCTGTCCCCATTGAAATGCCAGATACCACTAGTAATGATAAGGTGAAATTGAAGCCTTTGCATTGGGACAAGGTGAATACTAATGCTGATCATTCTATGGTGTGGGACAAACTGGATCGTGGTTCTTTCAGGGTTGATCAAGATCTTATGGAAGCTCTCTTTGGATTCGTTGCCACCAGCAGAAGAACTAGCCCAAAAGGGAAATCTAACTCAGCGAGTCCAAGCAGGGACGTCTCTGCTCCACCAACCAAAACTTCTATTCTTGATCCCAGAAAATCACAGAACATTGCCATTGTTTTGAAATCTCTGGCAGTGTCACGAGAAGAAATTCTCGATGCCCTCAATGAGGGTCAAGGTCTTAATGTGGATACCATTGAAAAGCTTGCTAGAGTTGCACCAACAGAAGAAGAGCAATCAGATATCCTTGAATACAAAGGAGATCCAATGAGACTTGCTGCTGCCGAAGCTTTCCTGTATGACATCCTCAAAGTTGTTCCTTCAGCTTTCAAGCGCTTGAATGCCATGCTTTTCAGGTTGAACTATGACTCCGAGATACTAGAAATCAAGGAATATTTACAGACCCTTGAACTCGGGTGTAAGGAACTTCGGAATAGAGGACTCTTTGTGAAGCTTCTTGAAGCAGTCCTCAAAGCTGGAAATCGAATGAATGCTGGTACCTCCAGAGGTAATGCTCAAGCTTTCAACTTGAGTTCTCTAAGGAAGCTCTCTGATGTCAAAAGTGCCGATGGAAAAACCACGTTACTCCACTTTGTGGTTGAAGAAGTAGTCAGGTCTGAAGGAAAACGATGTGTTCTTAACCGTGATCGCAGCCTGAGTCGTAGCGGCAGTAGGAGAAGCAACAGTAGCGAAAACTCTCAGAATTCTCTTTCAGATGAACAAAGAGAAAAGGAATACATAACGCTAGGATTACCATTTGTCGGAGGAATCAGTTCTGAGTTCTCCAACGTGAAGAAAGCAGCGATTATAGATTATAATAGTTTAGTTGGTTCAATCTCAGCCCTCTCAATCCGGATAGTTGAAATTCAAGAACTTGTTTCCCGGTGTGGAAATGATAAAGGAGGAAATTTTGTGAAGGAAATGGACCGTTTTCTGAAAAATGCTGAGGAGGATTTGAAATCGGTTAGAGATGAGCAAACAAGGGTAATGCAGCTTGTCAAGAGAACAACAGAATATTATCAAGGAGGTGCTTCAAAAGATACAGCAGAAAACCTTCTTCAAATGTTTGTAATAGTCAAGGATTTTCTGGGAATGGTTGATCAAGCCTGCATTGACATCGCTCGTAACTTGCAGAGGAGGAAGATAGGGAAGGCAATTTCTGGGTAA 2355 0.4582 MASIVLSWLLLSLLLVFQIFVIPICHCQNQNIETFYPGEPPAPSLAPISPTQPPEPLPPPSREERAPAPVGVSGSSSSNSKIATAVAATAASTLVVSGLIFFLIRRYMRKGRRREIANTSSASPGDHRRVVPQTNVFERIDGHVRGLIVDENGLDVVYWRKLEGKNSKKGLQKEVRRSVRKKEQEQEDEEEEDGYKGNHGKRSEPIPEIPLLRGKSSASHMSILSDDGVDSNGITRRTMSRTTPPPPPPPPPPPPPASAPPLPPPPPPPTPPPPSASSSAIPKMNSSASPPPPPPSTNSKSPAPPPPPPPPNVARKNPAPPPPPPLTGNLRSSSKPPPVPIEMPDTTSNDKVKLKPLHWDKVNTNADHSMVWDKLDRGSFRVDQDLMEALFGFVATSRRTSPKGKSNSASPSRDVSAPPTKTSILDPRKSQNIAIVLKSLAVSREEILDALNEGQGLNVDTIEKLARVAPTEEEQSDILEYKGDPMRLAAAEAFLYDILKVVPSAFKRLNAMLFRLNYDSEILEIKEYLQTLELGCKELRNRGLFVKLLEAVLKAGNRMNAGTSRGNAQAFNLSSLRKLSDVKSADGKTTLLHFVVEEVVRSEGKRCVLNRDRSLSRSGSRRSNSSENSQNSLSDEQREKEYITLGLPFVGGISSEFSNVKKAAIIDYNSLVGSISALSIRIVEIQELVSRCGNDKGGNFVKEMDRFLKNAEEDLKSVRDEQTRVMQLVKRTTEYYQGGASKDTAENLLQMFVIVKDFLGMVDQACIDIARNLQRRKIGKAISG 784
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g0782 784 Coils Coil 168 192 - -
Glsi05g0782 784 MobiDBLite consensus disorder prediction 616 637 - -
Glsi05g0782 784 SUPERFAMILY Formin homology 2 domain (FH2 domain) 420 777 - -
Glsi05g0782 784 MobiDBLite consensus disorder prediction 167 209 - -
Glsi05g0782 784 MobiDBLite consensus disorder prediction 42 78 - -
Glsi05g0782 784 MobiDBLite consensus disorder prediction 42 65 - -
Glsi05g0782 784 Gene3D Formin, FH2 domain 362 781 IPR042201 -
Glsi05g0782 784 SMART it6_source 344 777 IPR015425 -
Glsi05g0782 784 MobiDBLite consensus disorder prediction 286 343 - -
Glsi05g0782 784 Coils Coil 701 728 - -
Glsi05g0782 784 MobiDBLite consensus disorder prediction 399 424 - -
Glsi05g0782 784 PRINTS Proline rich extensin signature 244 269 - -
Glsi05g0782 784 PRINTS Proline rich extensin signature 47 59 - -
Glsi05g0782 784 PRINTS Proline rich extensin signature 283 295 - -
Glsi05g0782 784 ProSiteProfiles Formin homology-2 (FH2) domain profile. 344 784 IPR015425 -
Glsi05g0782 784 MobiDBLite consensus disorder prediction 167 185 - -
Glsi05g0782 784 Pfam Formin Homology 2 Domain 347 762 IPR015425 -
Glsi05g0782 784 PANTHER FORMIN-RELATED 277 774 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Glsi05g0782 784 MobiDBLite consensus disorder prediction 398 424 - -
Glsi05g0782 784 MobiDBLite consensus disorder prediction 222 240 - -
Glsi05g0782 784 MobiDBLite consensus disorder prediction 241 278 - -
Glsi05g0782 784 MobiDBLite consensus disorder prediction 222 356 - -
Glsi05g0782 784 MobiDBLite consensus disorder prediction 193 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g0782 Glsi-ChrGlsi05 58353911 58356365 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g0782 8 783 FH2 protein (formin) Gene Family AT1G70140 47.804 0.0 610