Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Glsi05g0779 | ATGGCTTCACATGATCGTGACCTTAGTGTTGATCGTCCTGATCCTGATCATGAAAGAGGTTTGATGAGGACGGAAAAGGAGCTGAGGAGGCGTGGTGACAAGGAAAAGGACTGTAGAGAAGAGAGTGACAGGAGAGAGCAAGAGCGGGATGATAGAGATTATGAGCATGATAATAGTCGGGACTACAATATGCAGCATTTCCCCAACAAACGGAAATCTGGTTGTAGGGCTGAAAATTCCAGTGCTGAACCTCTGCATCAAGGAGGTGATGCTGATGAAAATTTTGGTCTGCGCCGTATGTCATCCCCTTGTGATGATAAAAGTTCTGTGAAAAGTATGTATAGTCAGGAGTTTGCTTTCTGTGATAAAGTCAAGGAGAAATTACGGAATCCTGAGGATTATCAGGAATTTTTGAAGTGTCTCCATATCTATAGCAGGGAAATAATTACCCGACAAGAATTGCACTCATTGGTGGGTGATTTACTGGGAAAATATCCAGACCTTATGGAGGGGTTTAATGAATTTTTGGCACGATGTGAGAAGAATGATGGATGCCTTGCTGCTGTCATGAATAAAAAGTCCTTATGGAACGAAGGAAATGCACCAAAACCAATGAAGGAGGACAGGTATAGTGATAAAGATCGTGATTGTCGCAGGGATGATGGGGTTAAAGAAAGGGATCGTGAATACCGAGAAAGGGACAAATCTGCTGCCATTGGCGGCAAGGATGTTTCAGTTCCTAAGATGTCAATTTTTTCCACCAAGGATAAGTATATGGGAAAACCTATAAATGAGCTGGACCTTTCTAATTGTGAGCGATATTCTCTTGCTGATTATGTGTCATGTGCATTATTTGTGCTCACACAGTACCCAATACCTTTGGCTAGCCATAGAACAGAGCTTGGTGCTGAAGTATTGAATGATCAATGGGTGTCTGTCACCTCAGGAAGTGAAGACTATTCTTTCAAACACATGCGCAAAAACCAGTACGAAGAGAGCTTGTTTAGATGTGAAGATGACAGATTTGAACTTGATATGTTGTTAGAGTCTGTGAATGTAACAACCAAGCGAGTAGAAGAGCTCTTAGAAATGATCAATAATAAAGGAGACAGTCCAATTTGTATTGAGGAGTATTTAACAGCTTTGAACCTAAGGTGCATTGAACGATTGTATGGTGACCATGGGCTTGATGTAATGGATGTGTTAAGAAAGAATGCACCTTTAGCCTTGCCAGTCATATTAATCCGCTTGAAGCAGAAACAGGAAGAATGGGCAAGGTGTCGTGCTGATTTTAATAAAGTTTGGGCTGAAATATATGCTAAGAACTATCACAAATCCCTTAATCATCGTAGCTTCTACTTTAAGCAACAAGATACAAAAAGCTTGAGCACAAAAGCCTTACTAGCAGAAATTAAAGAAATTAGTGAGAAGAAACGTAAAGAAGATGACATTCTTCTAGCAATTGCTGCTGGAAATAGACGGTCCATTCTTCCAAATTTGGAATTTGAGTATCCAGATCCAGATATTCATGAAGATCTGTATCAGCTCATAAAATATTCATGTGGAGAAGTTTGTACAACTGAACAGTTAGATAAAGTTATGAAGATTTGGACAATGTTTATAGAACCCCTTCTTGGTGTTCCTTCTCGACCCCAGGGTGCTGAGGATACGGAAGAGGTTGTCAAGGCCAAGAATAATTCTAATAAAATTGGCACTGCCAGTGTTGCAGAGAGTGATGGTAGTGGTGCTACCGTAATGAATCCTAAACATTTAAATACTTCTAGAAATGAGGATGACAGTATTCCATTAGAACAGTTAAATTCTTGCAAAGCATGGCAAATAAATGGAGATAGTGGTGTCAAAGAAGACAACTGTCTTGTTGCAGACCGTACCACACATAAGACTGAAACTTTGGGCTGTAGTACACAGCATGGTAAAATGCAAATTAGTGCATCCTTGCCTGATGAAGGATCAGGAGTCAATAAGCAAGATCACTCCAATGAACAGTTAGTGAATGCCAATGTCTCCGTGACCTCTGGAATGGAGCACAGTAATGGAAGAACAGGCATTGATGATGCATCAGGAGGACTTGATTTACCTTCATCAGAGGGTGGTGATTCTACTAGACCAGCAACTTCCACAAATGGGGCCCTCACCGAAGGCACCAAAGTTCAAAGATACCAAGAAGAATCTGTTGGACACTTTAAAAGTGAAAGAGAAGAGGGTGAATTATCTCCAAATGGAGATTTTGAGGAGGATAACTTTGCAGTTTATGGAGGTGCTGGTTTGGAGGTGATGAATAAAGGAAAAGACGGTGGTATGAGTCGGCAATACCAAAATAGACATGGGGAAGAAGTTTGCGGTGAGGCAGGAGGGGAAAATGATGCTGATGATGAAGGTGAAGAAAGTCCTCGTAGGTCATTAGAGGACAGTGAGAATGCTTCTGAAAATGGCGATGTTTCTGGAAGTGAGTCTGCTGGTGGGGAGGAGTGTTCTCGAGAAGATCATGAAGATGGGGAACACGATGATCATGATAACAAGGCTGAGAGTGAAGGTGAAGGTGAAGGAATGGCTGATGCCAATGATGTTGAAGGAGACGGAACCTTATTGACATTTTCAGAACGCTTTCTAGTAACAGTAAAGCCTCTGGCAAAGTACATTCCCCCAGTGTTGCATGAGAAAGAAAGGAATTCTCAGGTTTTTTATGGAAATGATTCCTTTTATGTGCTTTTCAGGCTTCACCAGACATTATATGAGAGGATACAATCAGCAAAGATCAACTCTTCATCTGCTGAAAGGAAGTGGAGGGCTTCAAATGATACAAGTTCTACTGATCTATATGGCAGGTTCATGAATGCCCTTTACAATTTACTGGATGGTTCTTCTGACAATACAAAATTTGAGGATGACTGTCGAGCTATTATTGGAACTCAATCATATCTCTTATTCACTTTAGACAAGCTGATATACAAACTTGTTAAACAGCTTCAAGCTGTTGCCGCTGATGAGATGGATAACAAGCTTCTCCAACTTTATACATATGAGAAATCAAGAAAACCAGGAAAATTTTTTGATATAGTTTATCATGAAAATGCTCGTGTTCTTCTTCATGATGAGAACATATATCGTATTGAATGTTCATCTACACCAACCCAATTGTCTATTCAACTGATGGACTATGGACATGATAAGCCTGAATTGACTGCTGTGTCTATGGACCCAAATTTTTCAGCTTATCTGCTCAATGATTTCCTCTCTGTTGTCCCTGACAAAAAGGAGAAGTCTGGAATTTTCTTGAGGAGGAACAAACACAGATATTCATGTGGTGATGAATATTCAAGCCAGGCCTTGGAAGGAATACAAGTTAGTAATGGTCTGGAGTGTAAAATAGCTTGCAATTCATCTAAGGTTTCATATCTCATGCCATGA | 3429 | 0.4042 | MASHDRDLSVDRPDPDHERGLMRTEKELRRRGDKEKDCREESDRREQERDDRDYEHDNSRDYNMQHFPNKRKSGCRAENSSAEPLHQGGDADENFGLRRMSSPCDDKSSVKSMYSQEFAFCDKVKEKLRNPEDYQEFLKCLHIYSREIITRQELHSLVGDLLGKYPDLMEGFNEFLARCEKNDGCLAAVMNKKSLWNEGNAPKPMKEDRYSDKDRDCRRDDGVKERDREYRERDKSAAIGGKDVSVPKMSIFSTKDKYMGKPINELDLSNCERYSLADYVSCALFVLTQYPIPLASHRTELGAEVLNDQWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEELLEMINNKGDSPICIEEYLTALNLRCIERLYGDHGLDVMDVLRKNAPLALPVILIRLKQKQEEWARCRADFNKVWAEIYAKNYHKSLNHRSFYFKQQDTKSLSTKALLAEIKEISEKKRKEDDILLAIAAGNRRSILPNLEFEYPDPDIHEDLYQLIKYSCGEVCTTEQLDKVMKIWTMFIEPLLGVPSRPQGAEDTEEVVKAKNNSNKIGTASVAESDGSGATVMNPKHLNTSRNEDDSIPLEQLNSCKAWQINGDSGVKEDNCLVADRTTHKTETLGCSTQHGKMQISASLPDEGSGVNKQDHSNEQLVNANVSVTSGMEHSNGRTGIDDASGGLDLPSSEGGDSTRPATSTNGALTEGTKVQRYQEESVGHFKSEREEGELSPNGDFEEDNFAVYGGAGLEVMNKGKDGGMSRQYQNRHGEEVCGEAGGENDADDEGEESPRRSLEDSENASENGDVSGSESAGGEECSREDHEDGEHDDHDNKAESEGEGEGMADANDVEGDGTLLTFSERFLVTVKPLAKYIPPVLHEKERNSQVFYGNDSFYVLFRLHQTLYERIQSAKINSSSAERKWRASNDTSSTDLYGRFMNALYNLLDGSSDNTKFEDDCRAIIGTQSYLLFTLDKLIYKLVKQLQAVAADEMDNKLLQLYTYEKSRKPGKFFDIVYHENARVLLHDENIYRIECSSTPTQLSIQLMDYGHDKPELTAVSMDPNFSAYLLNDFLSVVPDKKEKSGIFLRRNKHRYSCGDEYSSQALEGIQVSNGLECKIACNSSKVSYLMP | 1142 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Glsi05g0779 | 1142 | SUPERFAMILY | PAH2 domain | 110 | 177 | IPR036600 | GO:0006355 | |
Glsi05g0779 | 1142 | MobiDBLite | consensus disorder prediction | 572 | 591 | - | - | |
Glsi05g0779 | 1142 | MobiDBLite | consensus disorder prediction | 679 | 753 | - | - | |
Glsi05g0779 | 1142 | MobiDBLite | consensus disorder prediction | 705 | 726 | - | - | |
Glsi05g0779 | 1142 | MobiDBLite | consensus disorder prediction | 727 | 744 | - | - | |
Glsi05g0779 | 1142 | PANTHER | SIN3B-RELATED | 117 | 1045 | IPR039774 | GO:0003714 | |
Glsi05g0779 | 1142 | MobiDBLite | consensus disorder prediction | 1 | 108 | - | - | |
Glsi05g0779 | 1142 | MobiDBLite | consensus disorder prediction | 572 | 599 | - | - | |
Glsi05g0779 | 1142 | MobiDBLite | consensus disorder prediction | 786 | 864 | - | - | |
Glsi05g0779 | 1142 | MobiDBLite | consensus disorder prediction | 202 | 236 | - | - | |
Glsi05g0779 | 1142 | MobiDBLite | consensus disorder prediction | 799 | 813 | - | - | |
Glsi05g0779 | 1142 | FunFam | Paired amphipathic helix protein SIN3 | 108 | 181 | - | - | |
Glsi05g0779 | 1142 | MobiDBLite | consensus disorder prediction | 197 | 236 | - | - | |
Glsi05g0779 | 1142 | MobiDBLite | consensus disorder prediction | 1 | 77 | - | - | |
Glsi05g0779 | 1142 | Pfam | C-terminal domain of Sin3a protein | 901 | 1139 | IPR031693 | - | |
Glsi05g0779 | 1142 | MobiDBLite | consensus disorder prediction | 828 | 854 | - | - | |
Glsi05g0779 | 1142 | Pfam | Sin3 family co-repressor | 289 | 368 | IPR013194 | - | |
Glsi05g0779 | 1142 | Gene3D | Paired amphipathic helix | 108 | 181 | IPR036600 | GO:0006355 | |
Glsi05g0779 | 1142 | Pfam | Paired amphipathic helix repeat | 132 | 176 | IPR003822 | GO:0006355 | |
Glsi05g0779 | 1142 | ProSiteProfiles | PAH domain profile. | 110 | 179 | IPR003822 | GO:0006355 | |
Glsi05g0779 | 1142 | SMART | hdac_interact2seq4b | 281 | 372 | IPR013194 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Glsi05g0779 | Glsi-ChrGlsi05 | 58324136 | 58332399 | Wgd |