Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Glsi05g0776 | ATGTCGCCGGAAGATGATGCCGTTTTATCAACTCCGGGAGCTTTCAGGCTCCGATGGGACGTGTTCTTGAGCTTCAGAGGTGCGGACACCCGTGAATCTTTCACCAAACCTCTCCACAAGTCCCTCGAATCTCGCGGCGTTCGAGTCTTCATCGACGACGAAGGATTGCATCGCGGTGACGAGATCGCTCCGAGTTTGATTGAAGCCATCGACGATTCGGCCGTTTACATTGTCATCCTCTCTCCCGATTACGCCTCTTCACACTGGTGCCTTGAGGAGCTTGCCAAGATTTGCGAGTGCCGGAGACTGATTCTGCCGGTGTTCTACCACGTCGACCCATCGGATGTCGGAAAACAAAAGGGTCCCTTTGAAAAATCCTTTAAAACCCATGAAAACAGATTTCAGAAAGAAAAGGTAATAAAGTGGAGGAAAGCCATGAAGAAAGTGGGTGGAGTTGCTGGTTGGGTTTTCCAGGAAAACAGGGAAGAAGATAATATAATTCAAATTTTGGTGAAAAGGATTTTAAAAGAACTGAGTAATACTCCAATGGTTGTGGCTGAATTTACCGTTGGACTTCATGATCAAGTTGAGGAAGTGATAAAATTATTAGATGTGAAATCTAATGGGATAAAAGTTCTGGGATTGTTTGGAGTGGGAGGGGTTGGTAAAACAACCCTTGCAAAGGCTCTTTTCAACAGCCTTGTTCCTCATTTTGAGCATCGCAGTTTCATTTCAAGTGTTAGAGAAATTTCATCAAAAGATGGTGGTTTAATCTCTCTACAAGACAGAATAATCGGTGACATTTCCTCTAAACCAGTGGTTCCCATCAATGATCGTGTTTCCGCTATTAAAAGAATAGTTCATGAAAATCGAGTTCTGCTAGTCTTAGATGATGTAGCTGACGTAAACCAGCTTGATAATCTGATTGGCGAAAGGGAATGGTTCTATGAAGGAAGCCGCATCATAATCACCACAAGGGACAGACAAGTTTTGCTTAAAACTCATGTTAATGTCCTGTACGAGGTTAAGGAACTGGGTTCCTCTGAAGCACTAGAACTATTCAGTTACCATGCAATGAGAAGAACGGAACCGGCAGATTATAACTTTATGAATCTGTCAAAACAAATAGTGTCTCTAACAGGAAGATTACCTTTGGCTCTGGAAGTGTTTGGTTCATTGTTGTTTGGGAAGAGAAGGGTAGAGGAATGGGTTGATGCTGTGGAGAAGCTGAAGAAGATTCGTCCTGGGGATCTCCAGGATGTGTTGAAGATAAGTTTTGATGGGTTGGATGAAGAGGAGAAATGCATATTCCTTGACATTGCTTGTTTGTTTGTGCAAATGGGGATGAAGAGAGATGATGTGATTGATATACTGAGAGGATGTAGATCTAGGGGAGAGATAGCAATCACAGTACTCACAGAAAAATGTTTGATCAAAATCAGAGAGGACGATACCCTTTGGATGCACGATCAAATTAGAGACATGGGAAGACAAATTGTTCTAGATGAAAACCTTGTTGATTCCGGTATGCGTAGTAGATTGTGGGATCGATCTGAAATCATGGGTGTTTTGGAGAATGACAAGGGTACGAGAAGTATTCAAGGGATGGTCCTAGACTTCGAGGAAAGATCTATTAAAGATAAGGATAACAAAGCTGTTGTACTTCATACGAAATCCTTTGAATCAATGGTGAACTTGACACTGCTTCAGATCAATAATTTGAGATTGGAAGGGATGTTTAAAAGTTTCCCTGCAGAATTGAAGTGGCTACAATGGCAAGGATGTCTTCTAAAATGCATGCCTTCTGACTTTTGGCCCCGAGAGCTGGCTGTCCTTGATCTCACACGCAGCAAAAATATTGAAAATCTGTGGTATGGGAAGGGCTACAAGGTGCCAGAGAAAATAATGGTCATGAACCTCTCCCACTGCTATCAACTAAATGCTGTTCCTGATCTATCTGGGTGTCGACGTTTAGAGAAGATTGTTCTTGAGAACTGCATTAGTCTCAGCAAAATTCATGAATCAATTGGCAATTTGACTACACTGCGTCATTTGAATCTGACTCGTTGTTATAACCTTGTTGAACTACCCAATGACATATCTGGGCTGAAAACTCTTGAGAACCTCTTCCTATCAGGCTGCTCAAAGTTAAAAGAATTGCCAAAGAATATGAGCAGCTTAAAATCACTGAGAAGACTTCTAGCTGATGACACAGCTCTAGCTGAGCTACCGGAGACCATTTTTCGCCTGACGAAACTAGAACAGCTTGTTTTAGATGGTTGCTCACGTTTGACAAGGCTACCCAATAACATAGGACATTTATGTTCTCTGCAAGAATTGTCTCTTAACAAATCCGCATTGAAAGAATTACCCAGTTCTGTTGGATGTTTGGGAAACCTTGAGAAGCTAAGCTTGATGTGGTGCCAATCTCTCACTGAGATTCCTGATTCTATAGGCAATCTCAAGTCACTTTCAGAACTTCTTCTTAATGGCAGTTCAATCAAAGAACTCCCTTCTTCTATAAGTTCATTATCTTATCTGAAGGAGCTATCTGTTGGAAACTGCAAGGATCTCAGTAAATTGCCTGAGTCTATTGAAGTTCTGGGTTCCATAGTTGAGCTTCAGTTAGATGGAACAGCAATCACAGATTTGCCAGAGCAGATTGGAGAAATGAAAATGCTGAAGAAGCTTGATATGAGGAATTGTAGGCATCTTAAATCTTTACCTGAATCTATTGGCGACCTTGCAGCTCTTACAACTTTCAACATAATCAATGCAGACATAAGGGAATTGCCAGATTCCTTTGGAAATCTGGGAAATCTTGTCATCTTGAGATTGAACAAATGCAGAATGCTCGGAAAGCTTCCTTATTCTATAGGATGTTTAAAGTCTTTGTATCACCTTTTTATGGAGGAAACTGCTCTGACAGAATTACCAGAAAGCTTTGGTATGCTTTCAAACTTAAGAACATTGAAAATGGCAAAGAAGCCTACAGAAGAGAGCCTTCATTCTTGGGCAATCTCATCTTCCTTCTGCAATTTGACTCTGCTGAGTGATCTGGATGCTCGGGATTGGAGAATATCTGGGAAGATTCCTGATGCTTTTGAGAAGTTGTCCATGTTAGAAACTTTGAATCTGAGCCAGAACAACTTTCACAGCCTTCCTTCCAGTTTAGAGGGCCTTTCCATTCTCAAGAAACTTTCCCTAAGAAACTGCAGCGAACTCATCTCTCTCCCTCCACTTCCTTCAAGCTTGATAGAGCTTAGTGCTGAAAACTGTTCTGCCTTAGAAAGCATACATAGCCTTTCAAAATTAAGAAACTTGCAAGAACTGAACCTCACAAATTGTGTAAAAGTGGTGGATATTCCAGGTCTTGAATGCTTGATGTCCTTGAGAAGGTTGTACCTGAGTGGATGCATTGCATGCTCCTCCGCAATAAGCAAGAGATTTTCAAAGATTGCACTGAGGAATTTTGAGAATTTGAGCATGCCAGGAACCAGATTGCCCAAATGGTTTTCAGGACAAACTCTTAGCTTTTCCAAGCCCAAGAATCGTGAACTGACGGGTGTAATTGTAGGTGTTGTTGTTTCAATCAACCATGATATACCTAATGAAATGCGAGATCATCTGCCTGGGGTGGTTGATATTCAAGCAAATGTTCACAAACTGGGCAAAACCATATTGAGTACAGTGTTGTACTTACGTGGGTTGCCAAGGACGAATGATGAACACATACACCTTTGTAGATTCCCAGATTACCATCATTTGCTCTATTTTTTGCGAGATGGTGATACATTCTCTGTGACTAAGAAAAACCCACCTGCTGATAATGGGTTAGAGCTGAAAAAATGTGGGGTGTATTTACTGTTTGAAGGGGATGATGATTATGAAGGAGACGAAGAATTTGTGGACAGAAACCTACAATCTGTGTCAGAAAAATTGGCCAAGTTTTTCAATACTTGCGAAGGAGATAGCCCCGAATATGCAAGTGAGAGTGAAGTTGATCAACGCCAAAAGCAAGTAGAGATTCAAGGAGAAGAGAGAAGAGCACCTCATATTGCCAGTAACTCCATTTTTCTGATCTCCTTGAGTCTATTCTTTCTCTTCTTGAGTTGGCTGTTGTTGAAATATGTCTTCGTCTAA | 4143 | 0.4135 | MSPEDDAVLSTPGAFRLRWDVFLSFRGADTRESFTKPLHKSLESRGVRVFIDDEGLHRGDEIAPSLIEAIDDSAVYIVILSPDYASSHWCLEELAKICECRRLILPVFYHVDPSDVGKQKGPFEKSFKTHENRFQKEKVIKWRKAMKKVGGVAGWVFQENREEDNIIQILVKRILKELSNTPMVVAEFTVGLHDQVEEVIKLLDVKSNGIKVLGLFGVGGVGKTTLAKALFNSLVPHFEHRSFISSVREISSKDGGLISLQDRIIGDISSKPVVPINDRVSAIKRIVHENRVLLVLDDVADVNQLDNLIGEREWFYEGSRIIITTRDRQVLLKTHVNVLYEVKELGSSEALELFSYHAMRRTEPADYNFMNLSKQIVSLTGRLPLALEVFGSLLFGKRRVEEWVDAVEKLKKIRPGDLQDVLKISFDGLDEEEKCIFLDIACLFVQMGMKRDDVIDILRGCRSRGEIAITVLTEKCLIKIREDDTLWMHDQIRDMGRQIVLDENLVDSGMRSRLWDRSEIMGVLENDKGTRSIQGMVLDFEERSIKDKDNKAVVLHTKSFESMVNLTLLQINNLRLEGMFKSFPAELKWLQWQGCLLKCMPSDFWPRELAVLDLTRSKNIENLWYGKGYKVPEKIMVMNLSHCYQLNAVPDLSGCRRLEKIVLENCISLSKIHESIGNLTTLRHLNLTRCYNLVELPNDISGLKTLENLFLSGCSKLKELPKNMSSLKSLRRLLADDTALAELPETIFRLTKLEQLVLDGCSRLTRLPNNIGHLCSLQELSLNKSALKELPSSVGCLGNLEKLSLMWCQSLTEIPDSIGNLKSLSELLLNGSSIKELPSSISSLSYLKELSVGNCKDLSKLPESIEVLGSIVELQLDGTAITDLPEQIGEMKMLKKLDMRNCRHLKSLPESIGDLAALTTFNIINADIRELPDSFGNLGNLVILRLNKCRMLGKLPYSIGCLKSLYHLFMEETALTELPESFGMLSNLRTLKMAKKPTEESLHSWAISSSFCNLTLLSDLDARDWRISGKIPDAFEKLSMLETLNLSQNNFHSLPSSLEGLSILKKLSLRNCSELISLPPLPSSLIELSAENCSALESIHSLSKLRNLQELNLTNCVKVVDIPGLECLMSLRRLYLSGCIACSSAISKRFSKIALRNFENLSMPGTRLPKWFSGQTLSFSKPKNRELTGVIVGVVVSINHDIPNEMRDHLPGVVDIQANVHKLGKTILSTVLYLRGLPRTNDEHIHLCRFPDYHHLLYFLRDGDTFSVTKKNPPADNGLELKKCGVYLLFEGDDDYEGDEEFVDRNLQSVSEKLAKFFNTCEGDSPEYASESEVDQRQKQVEIQGEERRAPHIASNSIFLISLSLFFLFLSWLLLKYVFV | 1380 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Glsi05g0776 | 1380 | SUPERFAMILY | L domain-like | 487 | 885 | - | - | |
Glsi05g0776 | 1380 | SMART | LRR_CC_2 | 797 | 830 | IPR006553 | - | |
Glsi05g0776 | 1380 | SMART | LRR_CC_2 | 655 | 682 | IPR006553 | - | |
Glsi05g0776 | 1380 | SMART | LRR_CC_2 | 1105 | 1131 | IPR006553 | - | |
Glsi05g0776 | 1380 | SMART | LRR_CC_2 | 891 | 918 | IPR006553 | - | |
Glsi05g0776 | 1380 | SMART | LRR_CC_2 | 844 | 871 | IPR006553 | - | |
Glsi05g0776 | 1380 | FunFam | Disease resistance protein (TIR-NBS-LRR class) | 16 | 180 | - | - | |
Glsi05g0776 | 1380 | SUPERFAMILY | L domain-like | 858 | 1168 | - | - | |
Glsi05g0776 | 1380 | ProSiteProfiles | Leucine-rich repeat profile. | 1040 | 1062 | IPR001611 | GO:0005515 | |
Glsi05g0776 | 1380 | SMART | till_3 | 18 | 152 | IPR000157 | GO:0007165 | |
Glsi05g0776 | 1380 | SUPERFAMILY | Toll/Interleukin receptor TIR domain | 16 | 155 | IPR035897 | - | |
Glsi05g0776 | 1380 | SMART | LRR_typ_2 | 915 | 937 | IPR003591 | - | |
Glsi05g0776 | 1380 | SMART | LRR_typ_2 | 1038 | 1061 | IPR003591 | - | |
Glsi05g0776 | 1380 | SMART | LRR_typ_2 | 774 | 797 | IPR003591 | - | |
Glsi05g0776 | 1380 | SMART | LRR_typ_2 | 727 | 750 | IPR003591 | - | |
Glsi05g0776 | 1380 | SMART | LRR_typ_2 | 821 | 844 | IPR003591 | - | |
Glsi05g0776 | 1380 | SMART | LRR_typ_2 | 962 | 984 | IPR003591 | - | |
Glsi05g0776 | 1380 | SMART | LRR_typ_2 | 868 | 891 | IPR003591 | - | |
Glsi05g0776 | 1380 | Gene3D | - | 177 | 339 | IPR027417 | - | |
Glsi05g0776 | 1380 | ProSiteProfiles | TIR domain profile. | 17 | 178 | IPR000157 | GO:0007165 | |
Glsi05g0776 | 1380 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 181 | 440 | IPR027417 | - | |
Glsi05g0776 | 1380 | Gene3D | - | 17 | 176 | IPR035897 | - | |
Glsi05g0776 | 1380 | Pfam | TIR domain | 19 | 182 | IPR000157 | GO:0007165 | |
Glsi05g0776 | 1380 | PRINTS | Disease resistance protein signature | 212 | 227 | - | - | |
Glsi05g0776 | 1380 | PRINTS | Disease resistance protein signature | 286 | 300 | - | - | |
Glsi05g0776 | 1380 | PRINTS | Disease resistance protein signature | 380 | 394 | - | - | |
Glsi05g0776 | 1380 | PRINTS | Disease resistance protein signature | 889 | 905 | - | - | |
Glsi05g0776 | 1380 | Gene3D | Ribonuclease Inhibitor | 537 | 719 | IPR032675 | - | |
Glsi05g0776 | 1380 | Pfam | NB-ARC domain | 194 | 413 | IPR002182 | GO:0043531 | |
Glsi05g0776 | 1380 | Gene3D | - | 345 | 430 | IPR042197 | - | |
Glsi05g0776 | 1380 | Gene3D | Ribonuclease Inhibitor | 720 | 992 | IPR032675 | - | |
Glsi05g0776 | 1380 | Gene3D | Ribonuclease Inhibitor | 1000 | 1201 | IPR032675 | - | |
Glsi05g0776 | 1380 | PANTHER | LEUCINE-RICH REPEAT-CONTAINING PROTEIN | 20 | 814 | IPR044974 | GO:0006952 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Glsi05g0776 | Glsi-ChrGlsi05 | 58289580 | 58295474 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Glsi05g0776 | 714 | 970 | WRKY Transcription Factor Family | AT4G12020 | 30.996 | 9.76e-13 | 71.6 |