Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g0776 ATGTCGCCGGAAGATGATGCCGTTTTATCAACTCCGGGAGCTTTCAGGCTCCGATGGGACGTGTTCTTGAGCTTCAGAGGTGCGGACACCCGTGAATCTTTCACCAAACCTCTCCACAAGTCCCTCGAATCTCGCGGCGTTCGAGTCTTCATCGACGACGAAGGATTGCATCGCGGTGACGAGATCGCTCCGAGTTTGATTGAAGCCATCGACGATTCGGCCGTTTACATTGTCATCCTCTCTCCCGATTACGCCTCTTCACACTGGTGCCTTGAGGAGCTTGCCAAGATTTGCGAGTGCCGGAGACTGATTCTGCCGGTGTTCTACCACGTCGACCCATCGGATGTCGGAAAACAAAAGGGTCCCTTTGAAAAATCCTTTAAAACCCATGAAAACAGATTTCAGAAAGAAAAGGTAATAAAGTGGAGGAAAGCCATGAAGAAAGTGGGTGGAGTTGCTGGTTGGGTTTTCCAGGAAAACAGGGAAGAAGATAATATAATTCAAATTTTGGTGAAAAGGATTTTAAAAGAACTGAGTAATACTCCAATGGTTGTGGCTGAATTTACCGTTGGACTTCATGATCAAGTTGAGGAAGTGATAAAATTATTAGATGTGAAATCTAATGGGATAAAAGTTCTGGGATTGTTTGGAGTGGGAGGGGTTGGTAAAACAACCCTTGCAAAGGCTCTTTTCAACAGCCTTGTTCCTCATTTTGAGCATCGCAGTTTCATTTCAAGTGTTAGAGAAATTTCATCAAAAGATGGTGGTTTAATCTCTCTACAAGACAGAATAATCGGTGACATTTCCTCTAAACCAGTGGTTCCCATCAATGATCGTGTTTCCGCTATTAAAAGAATAGTTCATGAAAATCGAGTTCTGCTAGTCTTAGATGATGTAGCTGACGTAAACCAGCTTGATAATCTGATTGGCGAAAGGGAATGGTTCTATGAAGGAAGCCGCATCATAATCACCACAAGGGACAGACAAGTTTTGCTTAAAACTCATGTTAATGTCCTGTACGAGGTTAAGGAACTGGGTTCCTCTGAAGCACTAGAACTATTCAGTTACCATGCAATGAGAAGAACGGAACCGGCAGATTATAACTTTATGAATCTGTCAAAACAAATAGTGTCTCTAACAGGAAGATTACCTTTGGCTCTGGAAGTGTTTGGTTCATTGTTGTTTGGGAAGAGAAGGGTAGAGGAATGGGTTGATGCTGTGGAGAAGCTGAAGAAGATTCGTCCTGGGGATCTCCAGGATGTGTTGAAGATAAGTTTTGATGGGTTGGATGAAGAGGAGAAATGCATATTCCTTGACATTGCTTGTTTGTTTGTGCAAATGGGGATGAAGAGAGATGATGTGATTGATATACTGAGAGGATGTAGATCTAGGGGAGAGATAGCAATCACAGTACTCACAGAAAAATGTTTGATCAAAATCAGAGAGGACGATACCCTTTGGATGCACGATCAAATTAGAGACATGGGAAGACAAATTGTTCTAGATGAAAACCTTGTTGATTCCGGTATGCGTAGTAGATTGTGGGATCGATCTGAAATCATGGGTGTTTTGGAGAATGACAAGGGTACGAGAAGTATTCAAGGGATGGTCCTAGACTTCGAGGAAAGATCTATTAAAGATAAGGATAACAAAGCTGTTGTACTTCATACGAAATCCTTTGAATCAATGGTGAACTTGACACTGCTTCAGATCAATAATTTGAGATTGGAAGGGATGTTTAAAAGTTTCCCTGCAGAATTGAAGTGGCTACAATGGCAAGGATGTCTTCTAAAATGCATGCCTTCTGACTTTTGGCCCCGAGAGCTGGCTGTCCTTGATCTCACACGCAGCAAAAATATTGAAAATCTGTGGTATGGGAAGGGCTACAAGGTGCCAGAGAAAATAATGGTCATGAACCTCTCCCACTGCTATCAACTAAATGCTGTTCCTGATCTATCTGGGTGTCGACGTTTAGAGAAGATTGTTCTTGAGAACTGCATTAGTCTCAGCAAAATTCATGAATCAATTGGCAATTTGACTACACTGCGTCATTTGAATCTGACTCGTTGTTATAACCTTGTTGAACTACCCAATGACATATCTGGGCTGAAAACTCTTGAGAACCTCTTCCTATCAGGCTGCTCAAAGTTAAAAGAATTGCCAAAGAATATGAGCAGCTTAAAATCACTGAGAAGACTTCTAGCTGATGACACAGCTCTAGCTGAGCTACCGGAGACCATTTTTCGCCTGACGAAACTAGAACAGCTTGTTTTAGATGGTTGCTCACGTTTGACAAGGCTACCCAATAACATAGGACATTTATGTTCTCTGCAAGAATTGTCTCTTAACAAATCCGCATTGAAAGAATTACCCAGTTCTGTTGGATGTTTGGGAAACCTTGAGAAGCTAAGCTTGATGTGGTGCCAATCTCTCACTGAGATTCCTGATTCTATAGGCAATCTCAAGTCACTTTCAGAACTTCTTCTTAATGGCAGTTCAATCAAAGAACTCCCTTCTTCTATAAGTTCATTATCTTATCTGAAGGAGCTATCTGTTGGAAACTGCAAGGATCTCAGTAAATTGCCTGAGTCTATTGAAGTTCTGGGTTCCATAGTTGAGCTTCAGTTAGATGGAACAGCAATCACAGATTTGCCAGAGCAGATTGGAGAAATGAAAATGCTGAAGAAGCTTGATATGAGGAATTGTAGGCATCTTAAATCTTTACCTGAATCTATTGGCGACCTTGCAGCTCTTACAACTTTCAACATAATCAATGCAGACATAAGGGAATTGCCAGATTCCTTTGGAAATCTGGGAAATCTTGTCATCTTGAGATTGAACAAATGCAGAATGCTCGGAAAGCTTCCTTATTCTATAGGATGTTTAAAGTCTTTGTATCACCTTTTTATGGAGGAAACTGCTCTGACAGAATTACCAGAAAGCTTTGGTATGCTTTCAAACTTAAGAACATTGAAAATGGCAAAGAAGCCTACAGAAGAGAGCCTTCATTCTTGGGCAATCTCATCTTCCTTCTGCAATTTGACTCTGCTGAGTGATCTGGATGCTCGGGATTGGAGAATATCTGGGAAGATTCCTGATGCTTTTGAGAAGTTGTCCATGTTAGAAACTTTGAATCTGAGCCAGAACAACTTTCACAGCCTTCCTTCCAGTTTAGAGGGCCTTTCCATTCTCAAGAAACTTTCCCTAAGAAACTGCAGCGAACTCATCTCTCTCCCTCCACTTCCTTCAAGCTTGATAGAGCTTAGTGCTGAAAACTGTTCTGCCTTAGAAAGCATACATAGCCTTTCAAAATTAAGAAACTTGCAAGAACTGAACCTCACAAATTGTGTAAAAGTGGTGGATATTCCAGGTCTTGAATGCTTGATGTCCTTGAGAAGGTTGTACCTGAGTGGATGCATTGCATGCTCCTCCGCAATAAGCAAGAGATTTTCAAAGATTGCACTGAGGAATTTTGAGAATTTGAGCATGCCAGGAACCAGATTGCCCAAATGGTTTTCAGGACAAACTCTTAGCTTTTCCAAGCCCAAGAATCGTGAACTGACGGGTGTAATTGTAGGTGTTGTTGTTTCAATCAACCATGATATACCTAATGAAATGCGAGATCATCTGCCTGGGGTGGTTGATATTCAAGCAAATGTTCACAAACTGGGCAAAACCATATTGAGTACAGTGTTGTACTTACGTGGGTTGCCAAGGACGAATGATGAACACATACACCTTTGTAGATTCCCAGATTACCATCATTTGCTCTATTTTTTGCGAGATGGTGATACATTCTCTGTGACTAAGAAAAACCCACCTGCTGATAATGGGTTAGAGCTGAAAAAATGTGGGGTGTATTTACTGTTTGAAGGGGATGATGATTATGAAGGAGACGAAGAATTTGTGGACAGAAACCTACAATCTGTGTCAGAAAAATTGGCCAAGTTTTTCAATACTTGCGAAGGAGATAGCCCCGAATATGCAAGTGAGAGTGAAGTTGATCAACGCCAAAAGCAAGTAGAGATTCAAGGAGAAGAGAGAAGAGCACCTCATATTGCCAGTAACTCCATTTTTCTGATCTCCTTGAGTCTATTCTTTCTCTTCTTGAGTTGGCTGTTGTTGAAATATGTCTTCGTCTAA 4143 0.4135 MSPEDDAVLSTPGAFRLRWDVFLSFRGADTRESFTKPLHKSLESRGVRVFIDDEGLHRGDEIAPSLIEAIDDSAVYIVILSPDYASSHWCLEELAKICECRRLILPVFYHVDPSDVGKQKGPFEKSFKTHENRFQKEKVIKWRKAMKKVGGVAGWVFQENREEDNIIQILVKRILKELSNTPMVVAEFTVGLHDQVEEVIKLLDVKSNGIKVLGLFGVGGVGKTTLAKALFNSLVPHFEHRSFISSVREISSKDGGLISLQDRIIGDISSKPVVPINDRVSAIKRIVHENRVLLVLDDVADVNQLDNLIGEREWFYEGSRIIITTRDRQVLLKTHVNVLYEVKELGSSEALELFSYHAMRRTEPADYNFMNLSKQIVSLTGRLPLALEVFGSLLFGKRRVEEWVDAVEKLKKIRPGDLQDVLKISFDGLDEEEKCIFLDIACLFVQMGMKRDDVIDILRGCRSRGEIAITVLTEKCLIKIREDDTLWMHDQIRDMGRQIVLDENLVDSGMRSRLWDRSEIMGVLENDKGTRSIQGMVLDFEERSIKDKDNKAVVLHTKSFESMVNLTLLQINNLRLEGMFKSFPAELKWLQWQGCLLKCMPSDFWPRELAVLDLTRSKNIENLWYGKGYKVPEKIMVMNLSHCYQLNAVPDLSGCRRLEKIVLENCISLSKIHESIGNLTTLRHLNLTRCYNLVELPNDISGLKTLENLFLSGCSKLKELPKNMSSLKSLRRLLADDTALAELPETIFRLTKLEQLVLDGCSRLTRLPNNIGHLCSLQELSLNKSALKELPSSVGCLGNLEKLSLMWCQSLTEIPDSIGNLKSLSELLLNGSSIKELPSSISSLSYLKELSVGNCKDLSKLPESIEVLGSIVELQLDGTAITDLPEQIGEMKMLKKLDMRNCRHLKSLPESIGDLAALTTFNIINADIRELPDSFGNLGNLVILRLNKCRMLGKLPYSIGCLKSLYHLFMEETALTELPESFGMLSNLRTLKMAKKPTEESLHSWAISSSFCNLTLLSDLDARDWRISGKIPDAFEKLSMLETLNLSQNNFHSLPSSLEGLSILKKLSLRNCSELISLPPLPSSLIELSAENCSALESIHSLSKLRNLQELNLTNCVKVVDIPGLECLMSLRRLYLSGCIACSSAISKRFSKIALRNFENLSMPGTRLPKWFSGQTLSFSKPKNRELTGVIVGVVVSINHDIPNEMRDHLPGVVDIQANVHKLGKTILSTVLYLRGLPRTNDEHIHLCRFPDYHHLLYFLRDGDTFSVTKKNPPADNGLELKKCGVYLLFEGDDDYEGDEEFVDRNLQSVSEKLAKFFNTCEGDSPEYASESEVDQRQKQVEIQGEERRAPHIASNSIFLISLSLFFLFLSWLLLKYVFV 1380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g0776 1380 SUPERFAMILY L domain-like 487 885 - -
Glsi05g0776 1380 SMART LRR_CC_2 797 830 IPR006553 -
Glsi05g0776 1380 SMART LRR_CC_2 655 682 IPR006553 -
Glsi05g0776 1380 SMART LRR_CC_2 1105 1131 IPR006553 -
Glsi05g0776 1380 SMART LRR_CC_2 891 918 IPR006553 -
Glsi05g0776 1380 SMART LRR_CC_2 844 871 IPR006553 -
Glsi05g0776 1380 FunFam Disease resistance protein (TIR-NBS-LRR class) 16 180 - -
Glsi05g0776 1380 SUPERFAMILY L domain-like 858 1168 - -
Glsi05g0776 1380 ProSiteProfiles Leucine-rich repeat profile. 1040 1062 IPR001611 GO:0005515
Glsi05g0776 1380 SMART till_3 18 152 IPR000157 GO:0007165
Glsi05g0776 1380 SUPERFAMILY Toll/Interleukin receptor TIR domain 16 155 IPR035897 -
Glsi05g0776 1380 SMART LRR_typ_2 915 937 IPR003591 -
Glsi05g0776 1380 SMART LRR_typ_2 1038 1061 IPR003591 -
Glsi05g0776 1380 SMART LRR_typ_2 774 797 IPR003591 -
Glsi05g0776 1380 SMART LRR_typ_2 727 750 IPR003591 -
Glsi05g0776 1380 SMART LRR_typ_2 821 844 IPR003591 -
Glsi05g0776 1380 SMART LRR_typ_2 962 984 IPR003591 -
Glsi05g0776 1380 SMART LRR_typ_2 868 891 IPR003591 -
Glsi05g0776 1380 Gene3D - 177 339 IPR027417 -
Glsi05g0776 1380 ProSiteProfiles TIR domain profile. 17 178 IPR000157 GO:0007165
Glsi05g0776 1380 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 181 440 IPR027417 -
Glsi05g0776 1380 Gene3D - 17 176 IPR035897 -
Glsi05g0776 1380 Pfam TIR domain 19 182 IPR000157 GO:0007165
Glsi05g0776 1380 PRINTS Disease resistance protein signature 212 227 - -
Glsi05g0776 1380 PRINTS Disease resistance protein signature 286 300 - -
Glsi05g0776 1380 PRINTS Disease resistance protein signature 380 394 - -
Glsi05g0776 1380 PRINTS Disease resistance protein signature 889 905 - -
Glsi05g0776 1380 Gene3D Ribonuclease Inhibitor 537 719 IPR032675 -
Glsi05g0776 1380 Pfam NB-ARC domain 194 413 IPR002182 GO:0043531
Glsi05g0776 1380 Gene3D - 345 430 IPR042197 -
Glsi05g0776 1380 Gene3D Ribonuclease Inhibitor 720 992 IPR032675 -
Glsi05g0776 1380 Gene3D Ribonuclease Inhibitor 1000 1201 IPR032675 -
Glsi05g0776 1380 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 20 814 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g0776 Glsi-ChrGlsi05 58289580 58295474 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g0776 714 970 WRKY Transcription Factor Family AT4G12020 30.996 9.76e-13 71.6