Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g0775 ATGTCGCTGGAAGATGACGCCGTTTCGTCCACTCCTGGAGGTTTCAGGCTCCGATGGGACGTGTTCTTGAGCTTCAGAGGTCCGGACGCCCGTGTCTCTTTCACCAAACCTCTCCACGAGTCCCTCGAATCTCGCGGCGTTCGAGTCTTCATCGACGACGAAGGGTTGCGTCGCGGTGCTCGTATCTCAATTTTGCTCTGTTTTTCTTCCCCCTTCTGGTTTTGCTCCGAGCGGTTTACTATTGTTCCTGTTTGTTACAGTGATGAAGCTAAGCTGATTCAACATTTGGTGAAAGGGATTCTCAAAGAATTGAGTAACACTCCAATAGGCGTTGCTGAATTTACCGTCGGACTTGATGATCGTGTGGAAGAGGTAATGAAGTTGTTAGATGTGAAATCCCCCACTGTAAAAGTGTTGGGATTATTTGGGCTGGGCGGGGTTGGTAAGACAACCCTTGCCAAGGCTCTCTACAACAACCTTGTCGCTCATTTTGAGCATCGCAGCTTCATTTCCAATGTTAGAGAAGCTTCATCAACAACGGAAGGTTTAATTTCTCTTCAAAACAACCTGCGTCGTAATCTTTCTTCCGGAGCAATGGTTCCTGTGAATGACATCAACGATGGCGTAGATGCAATTAAAAGGACAGTAGAGCAACACCCAGTTCTGAGAGATGACGCTATTGATATATTGAGGGGTTGTGGTTTTAGGGGAGAGATAACTATGACAGTGCTCACAAATAAATGTCTAATCAAAATCACAAAGGAAGATACCCTGTGGATGCATGATCAAATTGTAGACATGGGAAGGCAAATTGTTATAGATAAAAACCCTGGTGATCGCGGTATGCGTAGCAGATTATGGGATCGTGCTGAAATCGTGGATGTTTTGAAGGGTAAAAAGGGAACAAGATCTATCGAAGGGATTGTACTAGAATTCACAAAGAAAAGAAAGTCAAAACCGAGAGATCGCAGTGCCGATGAAATTACCTGGGATATCTTTCGACAAAATCCCAGTTGTAATTCTGCATCAGAATACTTGAAACAAAGGTACAAGAAATATGTTCAGGATCGAGCAGAGAAAGCAAAGTTGTTCACACTTCAGACAAAGCAGTTCCAACCAATGGTTGGCTTGAGGCTGCTTCAAATCAATTATTCGAGATTGGAAGGAAATTTCAAATGTCTTCCTTCTGGATTGAAGTGGTTACAATGGAAACAATGTCCTTTGAGAAATATTCCTTCTGACTATTGTCCTTCAGAACTTGCTGTGCTGGATCTGTCAGAAAGTGAGATTGAAACATTGTGGGGCAGACATAACAACAAGGTGTTTGAGCACTTGCTGGTTTTAAATCTCTCCAGTTGCAGCAGTTTGAGAGCTATTCCTGATTTAAATGGGTATTCATCTCTAGAAAAGATTGATCTGGAGGAATGCAGTCAATTAAGTAGGATTCATGAATCTATAGGGAATTTGAGTGCATTAGTCCACTTGAATATGCGCCAGTGCCACAACCTTGTTGAATTACCTAGTGATGTCTCTGGGCTAAAACGTCTTGAGAACCTTATTCTTTCTGATTGTTGGAAATTAAAAGCATTACCAAAGGACATAAGCTGCATGGTCTCATTAAGACAGCTTCTTGTTGATGGCACTGCTATAAGTGAATTACCTGAGTCCATTTTCCACCTGACAAAACTTGAAAAGTTGAGTTTATACAGATGCCATTCACTGAAGAAGCTTCCCATCTGCATTGGGAAACTATGCTCTTTGCTAGAACTGTCTCTCCACCATACAGCATTGGAGGACTTGCCAGATTCTATTGGGTCTCTGAAAAACCTTGTGATGCTTGGCTTGATGGGGTGTAAATCCCTCACCGTGATTCCTGATTCTGTTGGCAAACTAGAATCACTGACACAGTTATATTTGGATGGAAGTGGAATCAAAGAGTTGCCTGCTTCTATTGGTTCCTTATCATTTTTAAGGCAGCTGACTGTTGGGAACTGCAAGTTTCTTGAAAAATTGCCCGATTCAGTAGAAGCATTAGGTTCTATTGTGGAGCTTCAGTTAGATGGGACATCAATCACCAATTTTCCAGAAAACATTGGGGGCATGAAGATGTTAAGAAAACTTACAATGAGAAAATGCCAGCATCTCAGATTTCTACCAGAAACAATTGGCAGCTGGTCAGCTGTTACAACTTTGGACATGTATAATACTAACATTACTGAGTTGCCAGAATCAATAGCGATGTTGGAAAATCTACTCTGGTTTAGATTAGACATGTGCGAACATCTCCAAAAACTTCCAGCATCCCTCGGAAAATTAAAATCTTTGCGTCAGTTACTGATGAAAGAAACAGCTCTTACACAACTACCTGATAGCTTTTGGATGCTTTCAAGCTTGGTAAACTTAGACATGGAAAAAAGGCCTTATCTTAAAATGACTGGAAACAACATGCCTACAGGGGATGAAATTCCTATTAGACAAGAAGAACCTAATTCGACTACAATCCTAAGTTCTTTCTGTAGTCTAACCTTGCTACAAGTTCTGAATGCTCATGGCTGGAGAATATCTGGTAAAATTCCAGATGATTTTGAACAGCTGTCATCTTTAGAGACTCTAAATCTTGGCCACAATAATATTTGCAGTCTTCCAGCCAGTATGAAAGGCCTCTGCTGTCTGAAAAAGCTTTTGTTGCCAGATTGCAGGGAGCTCAGATTGCTCCCTCCTCTTCCTTCTAGCTTGACAGAAGTGAATGTTGCGAACTGTACTGCATTACAATATATTTCTGATGTTTCAAATTTGGACTTCTTAGAGGAGCTGAATCTCATAAATTGTGAAAAAGTGGTTGATATTCCAGGTCTCGAAGGCTTGAAGTCCTTGAGAAGATTGTACATGAGTGGTTGCAATGGATGCTCATGTACTGTAAAGAAAAGATTTTCCAAGAGAAACCGTCAGCTGAAAGGGGTCATTTGTGGTGGTGTGCTCTCTTTCAACCACATACCTGAAAATGTAAGAGATAGCCTAGAATTGGTTGATGTTCAAGCGAAGATCCTCAACATGACTGATCGGGTATTTGCAACAACGTTGCGGCTGCTAGGAATACCTAGGACAAATGAAGAGCACATATTTTTGCGTAGGTTTAGAGATGTTCATGCATTAGTTTTTTCGTTAAAAGATCGATTTACTGTACAAGTGACAAAGCGAGACCCCCCCTTCGTTGAGGGCCTGACGCTGAAGAAATGCGGGATTTATTTAGTGTTTGAAGGGGATGATGATTATGAAGGAGATGAAGAATTGGTGGACGAAAGGCAACACTCTGTTTCACATAGATTAGCCAGGTTCTTCAACTCTACATGA 3351 0.4154 MSLEDDAVSSTPGGFRLRWDVFLSFRGPDARVSFTKPLHESLESRGVRVFIDDEGLRRGARISILLCFSSPFWFCSERFTIVPVCYSDEAKLIQHLVKGILKELSNTPIGVAEFTVGLDDRVEEVMKLLDVKSPTVKVLGLFGLGGVGKTTLAKALYNNLVAHFEHRSFISNVREASSTTEGLISLQNNLRRNLSSGAMVPVNDINDGVDAIKRTVEQHPVLRDDAIDILRGCGFRGEITMTVLTNKCLIKITKEDTLWMHDQIVDMGRQIVIDKNPGDRGMRSRLWDRAEIVDVLKGKKGTRSIEGIVLEFTKKRKSKPRDRSADEITWDIFRQNPSCNSASEYLKQRYKKYVQDRAEKAKLFTLQTKQFQPMVGLRLLQINYSRLEGNFKCLPSGLKWLQWKQCPLRNIPSDYCPSELAVLDLSESEIETLWGRHNNKVFEHLLVLNLSSCSSLRAIPDLNGYSSLEKIDLEECSQLSRIHESIGNLSALVHLNMRQCHNLVELPSDVSGLKRLENLILSDCWKLKALPKDISCMVSLRQLLVDGTAISELPESIFHLTKLEKLSLYRCHSLKKLPICIGKLCSLLELSLHHTALEDLPDSIGSLKNLVMLGLMGCKSLTVIPDSVGKLESLTQLYLDGSGIKELPASIGSLSFLRQLTVGNCKFLEKLPDSVEALGSIVELQLDGTSITNFPENIGGMKMLRKLTMRKCQHLRFLPETIGSWSAVTTLDMYNTNITELPESIAMLENLLWFRLDMCEHLQKLPASLGKLKSLRQLLMKETALTQLPDSFWMLSSLVNLDMEKRPYLKMTGNNMPTGDEIPIRQEEPNSTTILSSFCSLTLLQVLNAHGWRISGKIPDDFEQLSSLETLNLGHNNICSLPASMKGLCCLKKLLLPDCRELRLLPPLPSSLTEVNVANCTALQYISDVSNLDFLEELNLINCEKVVDIPGLEGLKSLRRLYMSGCNGCSCTVKKRFSKRNRQLKGVICGGVLSFNHIPENVRDSLELVDVQAKILNMTDRVFATTLRLLGIPRTNEEHIFLRRFRDVHALVFSLKDRFTVQVTKRDPPFVEGLTLKKCGIYLVFEGDDDYEGDEELVDERQHSVSHRLARFFNST 1116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g0775 1116 Gene3D Ribonuclease Inhibitor 529 807 IPR032675 -
Glsi05g0775 1116 SMART LRR_typ_2 772 794 IPR003591 -
Glsi05g0775 1116 SMART LRR_typ_2 584 607 IPR003591 -
Glsi05g0775 1116 SMART LRR_typ_2 537 560 IPR003591 -
Glsi05g0775 1116 SMART LRR_typ_2 865 887 IPR003591 -
Glsi05g0775 1116 SMART LRR_typ_2 631 654 IPR003591 -
Glsi05g0775 1116 SMART LRR_typ_2 678 701 IPR003591 -
Glsi05g0775 1116 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 389 555 - -
Glsi05g0775 1116 Pfam NB-ARC domain 120 170 IPR002182 GO:0043531
Glsi05g0775 1116 Gene3D Ribonuclease Inhibitor 360 528 IPR032675 -
Glsi05g0775 1116 SUPERFAMILY L domain-like 669 970 - -
Glsi05g0775 1116 SUPERFAMILY L domain-like 261 695 - -
Glsi05g0775 1116 Gene3D - 100 226 IPR027417 -
Glsi05g0775 1116 PRINTS Disease resistance protein signature 138 153 - -
Glsi05g0775 1116 PRINTS Disease resistance protein signature 605 621 - -
Glsi05g0775 1116 ProSiteProfiles Leucine-rich repeat profile. 867 888 IPR001611 GO:0005515
Glsi05g0775 1116 SUPERFAMILY Toll/Interleukin receptor TIR domain 13 63 IPR035897 -
Glsi05g0775 1116 ProSiteProfiles TIR domain profile. 17 133 IPR000157 GO:0007165
Glsi05g0775 1116 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 110 222 IPR027417 -
Glsi05g0775 1116 Gene3D - 16 67 IPR035897 -
Glsi05g0775 1116 Gene3D Ribonuclease Inhibitor 809 1012 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g0775 Glsi-ChrGlsi05 58281156 58286948 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g0775 561 751 WRKY Transcription Factor Family AT4G12020 32.642 6.01e-10 62.0