Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g0773 ATGTCACTGGAAGGTGAAGTCGTTTCGTTCACTCCTGGAGGTTTCAGGCTCCGATGGGACGTGTTCTTGAGCTTCAGAGGTCCGGACGCCCGTGTCTCTTTCACCAAACCTCTCCACGAGTCCCTCGAATCTCGCGGCGTTCGAGTCTTCATCGACGACGAAGGGTTGCGTCGCGGTGACGAGATCGCTCCGAGTCTGCTCGAAGCCATCGACGATTCGGCTGCTTCCATTGTCATCCTCTCTCCTGATTACGCCTCTTCTCATTGAATGGGGATGAAGAGAGATGACGCTATTGATATATTGAGGGGTTGTGGTTTTAGGGGAGAGATAACTATGACAGTGCTCACAAATAAATGTCTAATCAAAATCACAAAGGAAGATACCCTGTGGATGCATGATCAAATTGTAGACATGGGAAGGCAAATTGTTATAGATAAAAACCCTGGTGATCGCGGTATGCGTAGCAGATTATGGGATCGTGCTGAAATCGTGGATGTTTTGAAGGGTAAAAAGGGAACAAGATCTATCGAAGGGATTGTACTAGAATTCACAAAGAAAAGAAAGTCAAAACCGACAGATCGCAGTGCTGATGAAATTACCTGGGATATCTTTCGACAAAATCCCAGTTGTAATTCTGCATCAGAATACTTGAAACAAAGGTACAAGAAATATGTTCAGGATCGAGCAGAGAAAGCAAAGTTGTTCACACTTCAGACAAAGCAGTTCCAACCAATGGTTGGCCTGAGGCTGCTTCAAATCAATTATTCGAGATTGGAAGGAAATTTCAAATGTCTTCCTTCAGGATTGAAGTGGTTACAATGGAAACAATGTCCTTTGAGAAATATTCCTTCTGACTATTGTCCATCAGAACTTGCTGTGCTGGATCTGTCAGAAAGTGAGATTGAAACATTGTGGGGCAGGCATAGCAACAAGGTGTCTGAGCACTTGCTGGTTTTAAATCTCTCCAGTTGCAGCAGTTTGAGAGCTATTCCTGATTTAAATGGGTATTCATCTCTAGAAAAGATTGATCTGGAGGGATGCAGTCAATTAAGTAGGATTCATGAATCGATAGGGAATTTGAGTACATTAGTCCACTTGAACATGCGCCACTGCTACAACCTTGTTGAATTACCTAGTGATGTCTCTGGGCTAAAACGTCTTGAGAACCTTATTCTTTCTGATTGCTGGAAATTAAAAGCATTACCAAAGGACATAAGCTGCATGGTCTCATTAAGACAGCTTCTTGTTGATGGCACTGCTATAAGTGAGCTACCTGAGTCCATTTTCCACCTGACGAAACTTGAAAAGTTGAGTTTATACAGATGCCATTCACTGAAGAGGCTTCCCATCTGCATTGGGAAACTATGCTCTTTGCTAGAACTGTCTCTCCATCATTCAGCATTGGAGGACTTGCCAGATTCTATTGGGTCTCTGAAAAACCTTGTGATGCTTGGCTTGAGGGGGTGTAAATCCCTCACTGTGATTCCTGATTCTGTTGGCAAACTAGAATCATTGACACAGTTATATTTGGATGGAAGTGGAATCAAAGAGTTGCCTGCTTCTATTGGTTCCTTATCATTTTTAAGGCAGCTAACTGTTGGGAACTGCAAGTTTCTTGACAAATTGCCTGATTCAGTAGAAGCATTAGGTTCTATTGTGGAGCTTCAGTTAGATGAGACATCAATCACCAATTTTCCAGAAAACATTGGAGGCATGAAGATGTTAAGAGAACTTACAATGAGAAAATGCCAGCATCTCAGATTTCTACCAGAAACAATTGGCAGCTGGTCAGCTCTTGCAACTTTGGACATGTATAATACTAACATTACTGAGTTGCCAGAATCAATAGCGATGTTGGAAAATCTACTCTGGTTTAGATTAGACATGTGCAAACAGCTCCAAAAACTTCCAGCATCCCTCGGAAAATTAAAATCTTTGCGTCAGTTACTGATGAAAGAAACAGCTCTTACACAACTACCTGATAGCTTTTCGATGCTTTCAAGCTTGGTAAACTTAGACATGGAAAAAAGGCCTTATCTTAAAATGACTGGAAACAACATGCCTACAGGGGATGAAATTCCTATTAGACAAGAAGAACCTAATTCGACTACAATCCTAAGTTCTTTCTGTAGTCTAACCTTGCTACAAGTTCTGAATGCTCATGGCTGGAGAATATCTGGTAAAATTCCAGATGATTTTGAACAGCTGTCATCTTTAGAGATTCTAAATCTTGGCCACAATAATATTTGCAGTCTTCCAGCCAGTATGAAAGGCCTCTGCTGTCTGAAAAAGCTTTTGTTGCCAGATTGCAGGGAGCTCAGATTGCTCCCTCCTCTTCCTTCTAGCTTGACAGAAGTGAATGTTGCGAACTGTACTGCATTACAATGTATATCTGATGTTTCAAATTTGGACTTCTTAGAGGAGCTGAATCTCATAAATTGTGAAAAAGTGGTTGATATTCCAGGTCTCGAAGGCTTGAAGTCCTTGAGAAGATTGTACATGAGTGGTTGCAATGGATGCTCATGTACTGTAAAGAAAAGATTTTCCAAGAGAAACCGTCAGCTGAAAGGGGTCATTTGTGGTGGTGTGCTTTCTTTCAACCGCCTATCTGAAAATGAAAGAGATGGCCTGCAATTGGAGGATGTTCAAGCGGAGATCCCCAACAACCATCTTTGCGGTCGTTAA 2685 0.4186 MSLEGEVVSFTPGGFRLRWDVFLSFRGPDARVSFTKPLHESLESRGVRVFIDDEGLRRGDEIAPSLLEAIDDSAASIVILSPDYASSHXMGMKRDDAIDILRGCGFRGEITMTVLTNKCLIKITKEDTLWMHDQIVDMGRQIVIDKNPGDRGMRSRLWDRAEIVDVLKGKKGTRSIEGIVLEFTKKRKSKPTDRSADEITWDIFRQNPSCNSASEYLKQRYKKYVQDRAEKAKLFTLQTKQFQPMVGLRLLQINYSRLEGNFKCLPSGLKWLQWKQCPLRNIPSDYCPSELAVLDLSESEIETLWGRHSNKVSEHLLVLNLSSCSSLRAIPDLNGYSSLEKIDLEGCSQLSRIHESIGNLSTLVHLNMRHCYNLVELPSDVSGLKRLENLILSDCWKLKALPKDISCMVSLRQLLVDGTAISELPESIFHLTKLEKLSLYRCHSLKRLPICIGKLCSLLELSLHHSALEDLPDSIGSLKNLVMLGLRGCKSLTVIPDSVGKLESLTQLYLDGSGIKELPASIGSLSFLRQLTVGNCKFLDKLPDSVEALGSIVELQLDETSITNFPENIGGMKMLRELTMRKCQHLRFLPETIGSWSALATLDMYNTNITELPESIAMLENLLWFRLDMCKQLQKLPASLGKLKSLRQLLMKETALTQLPDSFSMLSSLVNLDMEKRPYLKMTGNNMPTGDEIPIRQEEPNSTTILSSFCSLTLLQVLNAHGWRISGKIPDDFEQLSSLEILNLGHNNICSLPASMKGLCCLKKLLLPDCRELRLLPPLPSSLTEVNVANCTALQCISDVSNLDFLEELNLINCEKVVDIPGLEGLKSLRRLYMSGCNGCSCTVKKRFSKRNRQLKGVICGGVLSFNRLSENERDGLQLEDVQAEIPNNHLCGR 894
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g0773 894 Gene3D - 16 102 IPR035897 -
Glsi05g0773 894 Gene3D Ribonuclease Inhibitor 226 401 IPR032675 -
Glsi05g0773 894 SMART till_3 18 163 IPR000157 GO:0007165
Glsi05g0773 894 SUPERFAMILY L domain-like 131 558 - -
Glsi05g0773 894 ProSiteProfiles Leucine-rich repeat profile. 738 759 IPR001611 GO:0005515
Glsi05g0773 894 SUPERFAMILY Toll/Interleukin receptor TIR domain 16 90 IPR035897 -
Glsi05g0773 894 Gene3D Ribonuclease Inhibitor 402 676 IPR032675 -
Glsi05g0773 894 SMART LRR_typ_2 736 758 IPR003591 -
Glsi05g0773 894 SMART LRR_typ_2 455 478 IPR003591 -
Glsi05g0773 894 SMART LRR_typ_2 643 665 IPR003591 -
Glsi05g0773 894 SMART LRR_typ_2 549 572 IPR003591 -
Glsi05g0773 894 SMART LRR_typ_2 502 525 IPR003591 -
Glsi05g0773 894 SMART LRR_typ_2 408 431 IPR003591 -
Glsi05g0773 894 Pfam TIR domain 19 88 IPR000157 GO:0007165
Glsi05g0773 894 SUPERFAMILY L domain-like 541 841 - -
Glsi05g0773 894 Gene3D Ribonuclease Inhibitor 679 885 IPR032675 -
Glsi05g0773 894 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 257 426 - -
Glsi05g0773 894 ProSiteProfiles TIR domain profile. 17 143 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g0773 Glsi-ChrGlsi05 58244626 58251149 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g0773 432 622 WRKY Transcription Factor Family AT4G12020 31.771 1.50e-09 60.1