Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g0772 ATGAGCGGATGGGATAGGGTTAGACCATCATCGTCTTCCTCGAGATCGAGTTCTGGAATGGGTCCCAATCGCAATAGTAACTTCGCAAACCGCATACCTTCGTCTCGAACGGTTCAACTCGGTCGAGTACAGCCCCAGGCCCCCGGACACCGCACCGTTTTCTGCAATGATCGCGAAGCTAATCTTCCCGTCCGATTCAAGGGGAATTCAATATCGACCACAAAATATAACTTCATCACTTTCTTGCCAAAAGGACTGTTTGAACAGTTCAGACGGGTGGCTAATCTATACTTTCTTACAATTTCAATTTTGTCAACCACACCAATCAGTCCTGTGTCTCCTATAACTAATGTGATTCCTCTATCCTTGGTGCTTCTTATCTCTCTTATTAAGGAAGCTTTTGAGGACTGGATACCTGAAGGGATAGATGTTCAGAAAAACCATTTGATTTTAGTTTTGGTTTCTGGAATATATTGTAATCCAGTTGAAATTGGTAGGCTTCTTTTTCTACAATATTGGCCTCATGATTTTCTGGTTAAGCAGGATGGATTCTTTCCTGCAGATCTGCTTTTCCTGGCTAGCACAAATCCAGATGGTGTCTGCTACATTGAGACTGCTAATTTGGATGGGGAAACCAATTTGAAGATTAGGAAAGCATTGGAAAAGACTTGGGATTACCTGACTCCTGAGAAGGCATCTGAGTTTAAAGGTGTAGGATTTTTTTTTTGCCACAAATTTCTAATCTTGTTTTTCCGATGTGAGTATTCAAAATCCATTTGCACATTTGCTATTCCCCAGCATCAGACCAGTTCTGGAATCAGGATGGGTGAAATTATGATTAAGTTGTGTAATGATTGTATGATACGCCCTGCTGCAATTGATTTTTCAAAACGATTGTTTTTCATGCCTATGTATCAGTTTGATGGATGTGAAGTCCAGTGTGAACAACCAAATAATTCATTATATACCTTCACTGGAAATCTTATAATTCAAAAGCAAACACTCCCTCTCAGTCCAAATCAACTTTTGTTGCGAGGATGCAGTCTCAGGAATACAGAGTATATTGTTGGGGTTGTTATTTTTACAGGACATGAAACGAAGGATAACTTGTGGTTATTTGTCCATCTTGTTGCTGTACGTTTTCCTTCTGTGATTGTTAATGTACACTGTTTTAAAGACATTTGTAATACATTTCAGGTGATGATGAATACCATGAATGTTCCTTCCAAAAGAAGTACATTGGAGAGAAAGCTTGACAAGCTCATACTCACTCTATTTGCGACTCTATTTGTAATGTGTTTTATTGGAGCCATAGGCAGTGGTGTCTTTGTAAACAACAAGTATTTCTACTTACGTCTTGATGCAGATGATCAGGGCTCGGGGCAGTTTAATCCAAAAAATAGAATTCTGGTTGTCACTCTTACTATGTTTACCCTCATCACTTTATATTCAACAATCATCCCCATTTCACTTTATGTGTCAATAGAGATGGTCAAGTTTATTCAGTGCACGCAATTTATCAACAAGGATTTGCGCATGTACCATAGTGAGACCAATACCCCAGCATTGGCCAGAACTTCGAATCTGAATGAAGAACTTGGGCAGGTGGAATACATCTTCTCTGATAAAACTGGGACTCTAACAAGGAACTTAATGGAGTTCTTCAAGTGTTCAATTGGAGGGGAGGTCTATGGAACTGGCGTCACTGAAATCGAGAGAGGAATAGCTGAGCGCCGTGGCATGAAAATTGAGGCAGAAAATAGAGCAACCAATGCAGTGCACGAGAGGGGTTTTAATTTTGATGATGCTAGGCTTATGCGAGGAGCCTGGAGGAATGAGCCTAATCCAGATGCTTGCAAGGAATTCTTCAGATGCCTTGCTATATGCCATACTGTACTTCCTGAGGGCGATGAGTCTCCTGAAAAGATCAGATACCAAGCTGCATCACCTGATGAGGCTGCTTTGGTTATTGCTGCAAAACACTTTGGTTTCTTCTTTTACAGACGCACACCTACGACAATATGTGTTCGTGAATCTCATGTTGAGAAGATGGGCAAAATTCAGGATGTTTCTTTTGAGATTTTAAACGTGCTTGAGTTTAACAGTACAAGGAAGCGTCAGTCTGTTGTATGTCGTTATCCAGATGGGAGGCTTGTGTTGTACTGTAAGGGTGCTGATACTGTAATCTATGAGAGATTGGCTGACAGTAATAAAGATATGAAGAAAGTGACTAGGGAGCATTTGGAACAATTTGGGTCTGCTGGACTACGGACGTTATGCCTAGCCTACAAAGAATTACCTCCTGATGTGTATGAAAGCTGGAATGAGAAGTTCATCCAAGCCAAATCTTCTCTACGTGATCGTGAAAAGAAGTTAGATGAGGTGGCAGAACTTATAGAAAATGGTCTCGTTTTGATTGGTAGCACTGCCATCGAAGACAAGCTTCAAGAGGGAGTACCATCTTGTATTGAGATTCTTCAAAGAGCTGGGATCAAAATCTGGGTGCTTACAGGGGACAAGATCGAGACAGCAATAAACATAGCCTATGCATGCAATCTAATAAACAATGAGATGAAGCAATTTATCATCAGTTCAGAAACTGATGCAATTAGAGAAGCTGAAGAAAGGGGTGACCAAGTGGAAATTGCACGTATTACTAAAGAAGAAGTGAAAAAAGAGTTGAAGAGATGCCTTGAGGAAGCACAGATCTATCTTCAATCTCTATCTGGACCAAAATTAGCACTTGTAATTGATGGAAAATGTCTAATGTATGCATTAGATCCTAGTTTAAGAGTGATGCTGCTGAATTTGAGTTTGAATTGTCATGCAGTTGTTTGCTGCCGAGTTTCTCCTTTACAGAAAGCCCAGGTCACAACTTTGGTCAAAAAAGGTGCACGGAAAATAACACTTAGTATTGGTGATGGAGCCAATGATGTTAGCATGATTCAAGCTGCTCATGTTGGTGTTGGCATTAGTGGGCTGGAGGGGATGCAAGCAGTGATGGCTAGTGATTTTGCCATTGCACAGTTTCGTTACCTTGCAGATTTACTACTTGTTCATGGCCGGTGGTCATATCTTCGAATATGCAAGGTGGTGACATACTTCTTTTACAAGAATCTCACGTTCACTCTTACTCAATTTTGGTTTACTTTTCAAACTGGGTTTTCGGGTCAGAGGTTCTATGACGATTGGTTTCAGTCATTGTATAATGTCATCTTCACTGCACTTCCTGTGATCATTGTTGGACTATTTGACAAGGATGTCAGTGCATCTCTTTCCATGAAGTACCCTGAACTCTATAGGGAGGGGATTAGAAATGTCTTTTTCAAATGGAGAGTTGTGGCAATATGGGCCTTTTTCTCTCTCTACCAGTCTCTAATATTCTTCTATTTTGTGAGTACATCAAGTTTAAGTGCTAAAAATTCAGCTGGAAAAACATTTGGACTCTGGGATGTCAGTACAATGGCCTTCACATGTGTTATCATAACTGTCAACTTGCGACTTCTTATGATTTGTAATTCGATTACAAGATGGCACTATTATAGTGTTGGTGGAAGTATACTAGCGTGGTTTATTTTCGCTTTCATATATTCAGGGATCACTACTCCATATGATAGACAGGAGAATATTTATTTTGTCATATATATCTTGATGAGTACATTCTATTTCTACTTCACACTTCTTCTTGTCCCTGTTGTTGCACTTTTCGGTGACTTTGTTTACCAAGGGGTCCAAAGATGGTTCTTCCCCTATGATTATCAGATTGTTCAGGAAATGCATAGACATGACCTTGATAATGCGAGCAGGGCACAACTGCTGGAGATAGAGAACCAGCTTACCCCAGATGAAGCAAGGAGCTACGCCATATCACAACTCCCACCGGCGATATCAAAGCACACTGGTTTCGCTTTTGATTCACCTGGATACGAGTCCTTTTTTGCTTCACAGCTCGGTGTATATGCCCCACAAAAGGCATGGGATGTTGCAAGACGAGCTAGCGCGAGGTCTAAGCCAAAGATAGGCCAGAAAAAATAA 4035 0.4067 MSGWDRVRPSSSSSRSSSGMGPNRNSNFANRIPSSRTVQLGRVQPQAPGHRTVFCNDREANLPVRFKGNSISTTKYNFITFLPKGLFEQFRRVANLYFLTISILSTTPISPVSPITNVIPLSLVLLISLIKEAFEDWIPEGIDVQKNHLILVLVSGIYCNPVEIGRLLFLQYWPHDFLVKQDGFFPADLLFLASTNPDGVCYIETANLDGETNLKIRKALEKTWDYLTPEKASEFKGVGFFFCHKFLILFFRCEYSKSICTFAIPQHQTSSGIRMGEIMIKLCNDCMIRPAAIDFSKRLFFMPMYQFDGCEVQCEQPNNSLYTFTGNLIIQKQTLPLSPNQLLLRGCSLRNTEYIVGVVIFTGHETKDNLWLFVHLVAVRFPSVIVNVHCFKDICNTFQVMMNTMNVPSKRSTLERKLDKLILTLFATLFVMCFIGAIGSGVFVNNKYFYLRLDADDQGSGQFNPKNRILVVTLTMFTLITLYSTIIPISLYVSIEMVKFIQCTQFINKDLRMYHSETNTPALARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSIGGEVYGTGVTEIERGIAERRGMKIEAENRATNAVHERGFNFDDARLMRGAWRNEPNPDACKEFFRCLAICHTVLPEGDESPEKIRYQAASPDEAALVIAAKHFGFFFYRRTPTTICVRESHVEKMGKIQDVSFEILNVLEFNSTRKRQSVVCRYPDGRLVLYCKGADTVIYERLADSNKDMKKVTREHLEQFGSAGLRTLCLAYKELPPDVYESWNEKFIQAKSSLRDREKKLDEVAELIENGLVLIGSTAIEDKLQEGVPSCIEILQRAGIKIWVLTGDKIETAINIAYACNLINNEMKQFIISSETDAIREAEERGDQVEIARITKEEVKKELKRCLEEAQIYLQSLSGPKLALVIDGKCLMYALDPSLRVMLLNLSLNCHAVVCCRVSPLQKAQVTTLVKKGARKITLSIGDGANDVSMIQAAHVGVGISGLEGMQAVMASDFAIAQFRYLADLLLVHGRWSYLRICKVVTYFFYKNLTFTLTQFWFTFQTGFSGQRFYDDWFQSLYNVIFTALPVIIVGLFDKDVSASLSMKYPELYREGIRNVFFKWRVVAIWAFFSLYQSLIFFYFVSTSSLSAKNSAGKTFGLWDVSTMAFTCVIITVNLRLLMICNSITRWHYYSVGGSILAWFIFAFIYSGITTPYDRQENIYFVIYILMSTFYFYFTLLLVPVVALFGDFVYQGVQRWFFPYDYQIVQEMHRHDLDNASRAQLLEIENQLTPDEARSYAISQLPPAISKHTGFAFDSPGYESFFASQLGVYAPQKAWDVARRASARSKPKIGQKK 1344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g0772 1344 SFLD p-type atpase 522 1023 IPR044492 -
Glsi05g0772 1344 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 546 819 IPR023299 GO:0000166
Glsi05g0772 1344 Coils Coil 880 907 - -
Glsi05g0772 1344 Gene3D - 802 1012 IPR023214 -
Glsi05g0772 1344 SUPERFAMILY Calcium ATPase, transduction domain A 178 367 IPR008250 -
Glsi05g0772 1344 SUPERFAMILY HAD-like 528 1014 IPR036412 -
Glsi05g0772 1344 SFLD Haloacid Dehalogenase 522 1023 - -
Glsi05g0772 1344 CDD P-type_ATPase_APLT_Dnf-like 68 1132 - -
Glsi05g0772 1344 PRINTS P-type cation-transporting ATPase superfamily signature 540 554 - -
Glsi05g0772 1344 PRINTS P-type cation-transporting ATPase superfamily signature 972 991 - -
Glsi05g0772 1344 ProSitePatterns E1-E2 ATPases phosphorylation site. 542 548 IPR018303 -
Glsi05g0772 1344 NCBIfam phospholipid-translocating P-type ATPase 399 1258 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Glsi05g0772 1344 Pfam Cation transport ATPase (P-type) 638 732 - -
Glsi05g0772 1344 MobiDBLite consensus disorder prediction 1 31 - -
Glsi05g0772 1344 SUPERFAMILY Calcium ATPase, transmembrane domain M 65 1250 IPR023298 -
Glsi05g0772 1344 FunFam Phospholipid-transporting ATPase 805 1012 - -
Glsi05g0772 1344 FunFam Phospholipid-transporting ATPase 649 804 - -
Glsi05g0772 1344 NCBIfam HAD-IC family P-type ATPase 945 1051 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Glsi05g0772 1344 Pfam Phospholipid-translocating ATPase N-terminal 53 117 IPR032631 -
Glsi05g0772 1344 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 37 1294 - -
Glsi05g0772 1344 Pfam Phospholipid-translocating P-type ATPase C-terminal 1000 1250 IPR032630 -
Glsi05g0772 1344 Gene3D - 666 792 IPR023299 GO:0000166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g0772 Glsi-ChrGlsi05 58227411 58243705 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g0772 30 237 Primary Pumps ATPases AT1G59820 65.258 7.95e-78 280