Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g0737 ATGCTATACACATGCTCCATTTCTGACTTTGTTATGGCATTCTTGGAAGGTGTTCAAAACACACTCGTGAATGTGGATGAAACCATCTATATCCCTGTTACAAAGGCAGAGTTAGCAGTTTTCACCTCTGTTTTCAATTTTATCATGCCATACCTTCTAGGTTGGCATGCCTTTGCAAATTCCATAAAGCCAGAGGATCCAAGTCGAATGAACAATGCAAACCCAAGATATGGAGGAGACTATGAATGGAGCAGATAGAATGAACAGGTGCAGAAATGGCTCTTGAAAGACTGGAAAATGGGTTTGAAAAGGAACGAAGACTCGGAAGCTAGTTGGAATAAAGTATTGATGCTAACAATTATGCATGCTACGAGGGAGCTGGATATTCCTTGGGCCGCCCAGCTAAGGACACTTGGGTTGTTGACAATTCATAAGCAAACATCCGTCTCTCTCTCTTGTAATTTCGGCTTAATTATACAATTGAAGTCAAAATCTGATGGCTTTAGTATATATGGAGATGGTTTTAGCTCTAGAGACTCAAATAAGGATGAGAAAAAGAATAGTGATGGAAATAATAAATTAGAGGATGAGAATTTGGGAGAAGGGCTCAGACTTGGGCGAGATATCAGATTTGACCTTTCAGCCGAAGCTGAAGGTACTAATATTATTCCAAGTCCTGAAAGTAACTGTGATGATGAAGGGAAGGAAGAGAAACCTACAGAGATATGGCCACCCAGTAAGGTTCTGAAGAGAATGAGAAGTGGGGATAATGTTGAAGCTTCTCAACCAGCTCATCAGTTGAAGAAAGCTAGGGTTTCTATCAGAGCTAGATGTGATACTCAAACGATGAATGATGGATGTCAATGGAGAAAATATGGACAGAAAATAGCGAAGGGGAACCCATGCCCTCGGGCATACTACAGATGCACTGTCTCATCATCTTGTCCTGTGAAAAAACAGGTGCAAAGATGCGCTGAGGACATGTCCATCTTGAACACCACCTATGAAGGAACCCACAATCACCCACTCCCTATTTCAGCCACAGCCATGGCTTCCACAACCTCGGTGGCTGTTTCCATCCTTCAATCTCCCTCATTCACCTCCCAATCCTCAGGACTACTAGCAAATTCAGATCACACAGCCCCCATCTTCAACTCCTCCTCCACTCCTAATAACACCTTCAATAATAATGCCCTAAACTTCTCTACCACCTCCCAAATTCCAAGACCACCACAACAGCAGCAACACTTCTACTTCCCCAACTCCTCCATTTCCACCTCCAATTCTCACCCCACAATCACTCTTGACCTCACAGCACCACCAACACCACTAGCTTCCTCTCATCATCTCAGGAAATTCACTAATTCAGGCCTCTCTCCCATACCCGGATATTATTCATCAAGAACTTTCAATCTTTCTCCATCATTATCAGAATCTATCATACCATCGCAACCTAATTATGGTGGTTATTTCAACTATGAGACACTAACCCACAATAGAAATCAAAGTGTTCCTTCAATATTGAACACTGGGAAACAACCATTCCACCAACCTAATCATTATATGAGCAACCATGGAACTTCCCAAGAGACTATTGCTGCAGCAACCAAAACAATCACAACGAACCCGAAGTTTCAATCGGTTTTAGCTGCCGCACTCACAACGTACGCTGGTAATGGAGGTGCTTATAGTTCTGGCTCCAATGGAATAGAATGTACTATATCATCCAGGAACCTGAATGTGTCTTCTTCTTCTGCTGTTAATGCTCAACAAGGAAACCTAGTATTGTTTCCACCTTCGTTGCCATCACTACCAGCTTCTGCAAGTGGCTCTGCTTCTGATAGAGGTTCTTGCTCACTGCTGTCTTCCTCTGGTCCAGCTGGGCTTTGGTCTCGCGTGCTGCAAAGGCAAGCGTATGCTGCAGATAAAGGGATGGGCAAAGATGCTCCTGAAGCTGATAAACTAGGTGAAATAAAACTGCAAGAAGAACCCTTTAAGTCAACAACTGTAAGCTTGATAATGGCAACGGGTGGTTTGGGAGTTAACTGCAATCTCTTATCTCTTTTATGCCAATGTCAGCCTTTTGTTTCTGTGATAGAATCAGGCAAGTCTGAATACAGGACATCATTACTCCGTCTGCAGTTGTTTAAGGTCTTGAAGATTGCAAGGAAGAGATTTAACTGCATTGTTGCAAGGCCTATATCTAACCTGGGACTTCCTTTCATGTCTCCTCATGATGTAAGGATCCATCCATGGTCTACTTTTTAG 2268 0.429 MLYTCSISDFVMAFLEGVQNTLVNVDETIYIPVTKAELAVFTSVFNFIMPYLLGWHAFANSIKPEDPSRMNNANPRYGGDYEWSRXNEQVQKWLLKDWKMGLKRNEDSEASWNKVLMLTIMHATRELDIPWAAQLRTLGLLTIHKQTSVSLSCNFGLIIQLKSKSDGFSIYGDGFSSRDSNKDEKKNSDGNNKLEDENLGEGLRLGRDIRFDLSAEAEGTNIIPSPESNCDDEGKEEKPTEIWPPSKVLKRMRSGDNVEASQPAHQLKKARVSIRARCDTQTMNDGCQWRKYGQKIAKGNPCPRAYYRCTVSSSCPVKKQVQRCAEDMSILNTTYEGTHNHPLPISATAMASTTSVAVSILQSPSFTSQSSGLLANSDHTAPIFNSSSTPNNTFNNNALNFSTTSQIPRPPQQQQHFYFPNSSISTSNSHPTITLDLTAPPTPLASSHHLRKFTNSGLSPIPGYYSSRTFNLSPSLSESIIPSQPNYGGYFNYETLTHNRNQSVPSILNTGKQPFHQPNHYMSNHGTSQETIAAATKTITTNPKFQSVLAAALTTYAGNGGAYSSGSNGIECTISSRNLNVSSSSAVNAQQGNLVLFPPSLPSLPASASGSASDRGSCSLLSSSGPAGLWSRVLQRQAYAADKGMGKDAPEADKLGEIKLQEEPFKSTTVSLIMATGGLGVNCNLLSLLCQCQPFVSVIESGKSEYRTSLLRLQLFKVLKIARKRFNCIVARPISNLGLPFMSPHDVRIHPWSTF 755
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g0737 755 MobiDBLite consensus disorder prediction 504 525 - -
Glsi05g0737 755 Pfam WRKY DNA -binding domain 284 342 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi05g0737 755 ProSiteProfiles WRKY domain profile. 278 344 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi05g0737 755 SMART WRKY_cls 283 343 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi05g0737 755 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 167 568 IPR044810 GO:0003700
Glsi05g0737 755 MobiDBLite consensus disorder prediction 173 199 - -
Glsi05g0737 755 MobiDBLite consensus disorder prediction 394 423 - -
Glsi05g0737 755 MobiDBLite consensus disorder prediction 177 199 - -
Glsi05g0737 755 SUPERFAMILY WRKY DNA-binding domain 276 344 IPR036576 GO:0003700|GO:0006355|GO:0043565
Glsi05g0737 755 Gene3D Transcriptional Coactivator Pc4; Chain A 10 65 IPR009044 GO:0003677|GO:0006355
Glsi05g0737 755 SUPERFAMILY ssDNA-binding transcriptional regulator domain 17 87 IPR009044 GO:0003677|GO:0006355
Glsi05g0737 755 FunFam probable WRKY transcription factor 31 268 345 - -
Glsi05g0737 755 Gene3D WRKY domain 268 345 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g0737 Glsi-ChrGlsi05 57843846 57857195 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g0737 241 561 WRKY Transcription Factor Family AT5G15130 43.413 8.16e-57 200
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Glsi05g0737 WRKY 9.9e-24 CL0274