Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g0734 ATGGCTTTATTGGCTTCCCATACTTGGTCTCCTGAGAACATGAAAATTTTCTGGGTTTCTTTCTCTTACTTGTACTCTGCATTCCTCATTCTTGTTCTGCTTGGTCCAATTTCAAGAGCACAACTAACGCCAAGTGAGAGTAGAATTCTTCTGCAAGTTCAGAATTTTCTTGAATATCCTCAGGTTCTTCAAGGATGGAGGAGATGGACCAACTTCTGCTATCTCCCTCCCTCACCTTCGCTCAAGATTGTCTGCTCTAATGGCCATGTAACCGAATTAACCATCATTGGAAACAAGGTCTCTTCTTCTCCCAGCCCGAAACTAGATTTCTGGAATTCGGCTCAAACTCTTTCCAAAAGATTTTCCATTGATTCTTTCTTCACTGTCTTGACAAAGCTTTCAAATTTGAAGGTATTGTCACTAGTTTCATTGGGTTTGTGGGGTCCTTTACCAACCAAGATCGACCGGTTCTGGTCGCTTGAAGTGCTGAACATTAGCTCAAATTTCATTTCTGGGGAAATCCCATCGTCAATCTCTTCTCTGAAAAATCTCAGGAGTCTGGTTTTAGCTGATAATTTGTTGAATGGGAGTGTTCCAGATCTCAAAAAACTAGCTTCTCTTGAGGAACTCAATTTAGGTGACAACAAACTGGGTCCTAAATTCCCTTCAATGGGGAACAATCTTGTAAGTATTGTCTTGAGAAACAATTCTCTGAGATGTCAGATTCCACCCCAAATCATGCATTTTTATAAACTTAACCAATTTGATATCTCTTCCAATGAACTAATCGGAAATATCCCATTCTCTCTGTTCTCTCTGCCTTCCATTCTCTACATAAACTTGGCTCAAAACCAACTTAGTGGTAGCATCTCCTTGAACATAGCCTGCAGTTCTGCTCTAAGATTTGTGGATATCTCATACAACCAGTTGATGGGAAAATTGCCATCCTGCATTGGGTCAAAGCCCTCAAATCGCACGATGCTATATTCTTGGAATTGTTTTTTGACCAGAAACTTAAATGATCAACACCCATATTCATATTGCAAGAAAGAGGAGGCATTAGCAGTTAAGCCTCCAGGAAGAAGCCAGAAGAAGAAGGGTATGAAATTAGTCCTGGTACTTGGAGTTATTGCAGGTGCTGTTGGACTTGCAGGGCTTCTGTCACTGCTCATTCTGTTCATCTTCAAGAAGTACAAAGGAGAAAGATCAGATAATAACAATTTAGACAGATCTTTTGCTTATAAATTATCTGTCCCTTCATTCCCAAGACCAAAAAGTGATGAAAGACGTATTCCTCAGATAATGAGACAAGCTGCACTTGGACTCCCACCATACCGCATTTTCACAATAGAGGAAATTGAAGATGCAACAAACAACTTTGACCCATCAAATCTAATAGGAGAAGTATCTCATGGACAGCTATATAAAGGCTGCCTTATAGATGGTTCAGCGGTCCTGGTCAATTGTGTAAAACTTACGCAGAAGAACTTGACCCAAAGCCTCCTCATGCAGCACTTGGAGGTATTACCCAATTTGAGGCATAGGCATTTGGTGAGTGTCCTGGGACACTCTGTTATTACTTATCAAGACCATCCCCAACCAACAAGCAGAGTTTTCATTGTCTTCGAGCACATCTCGGACGGATCGTTGAGGGATCATCTTAGAGATTTGAGAAAGAAGCAAATGCTGAAATGGCCAGAGAGAATGGCAATCACCATAGGCATTGCAAGAGGGACCCAGTTTTTACACACTGGAGTTGCTCCTGCCATATATGGCAATAATTTAAAGATTGAGAACATTTTGTTGGATGATAATCTCAACCCAAAAGTTAGTGGATATAAAATTCCGTTGCCATATAAGAATGGTTTTGAGAGCACACTTACTGAACAAAGTTCCCCCAGCCATGTTGGGAGAACCGTTAAGGCAGAAAAGGAAGATATCTACCAGTTAGGGGTTATTCTACTTGAAGTTATCACTGGCAAACCACTTACATCTTCCAGTGAAGTAGAGGATCTGAAGGATGAGCTGGAGAGAGGTTTATCAGAAGCAGCATCAACACTGAGAAGTGCAACCGATCCCTCCATCCAGGGAACTTATGCATATGAATCGCTGAGGACTGCAGTTCAGATCACTATCAGCTGTCTCAGCAACGTTTCTAGTAAGCGCCCTTCGATAGAGGACGTTCTTTGGAATTTACAGTACACAATACAAGTCCAAGAGGCGTGGACCAGCAGTGGAAACCTCAGTACAAAATTGACAGCTGGTAGTTCGTAA 2274 0.4151 MALLASHTWSPENMKIFWVSFSYLYSAFLILVLLGPISRAQLTPSESRILLQVQNFLEYPQVLQGWRRWTNFCYLPPSPSLKIVCSNGHVTELTIIGNKVSSSPSPKLDFWNSAQTLSKRFSIDSFFTVLTKLSNLKVLSLVSLGLWGPLPTKIDRFWSLEVLNISSNFISGEIPSSISSLKNLRSLVLADNLLNGSVPDLKKLASLEELNLGDNKLGPKFPSMGNNLVSIVLRNNSLRCQIPPQIMHFYKLNQFDISSNELIGNIPFSLFSLPSILYINLAQNQLSGSISLNIACSSALRFVDISYNQLMGKLPSCIGSKPSNRTMLYSWNCFLTRNLNDQHPYSYCKKEEALAVKPPGRSQKKKGMKLVLVLGVIAGAVGLAGLLSLLILFIFKKYKGERSDNNNLDRSFAYKLSVPSFPRPKSDERRIPQIMRQAALGLPPYRIFTIEEIEDATNNFDPSNLIGEVSHGQLYKGCLIDGSAVLVNCVKLTQKNLTQSLLMQHLEVLPNLRHRHLVSVLGHSVITYQDHPQPTSRVFIVFEHISDGSLRDHLRDLRKKQMLKWPERMAITIGIARGTQFLHTGVAPAIYGNNLKIENILLDDNLNPKVSGYKIPLPYKNGFESTLTEQSSPSHVGRTVKAEKEDIYQLGVILLEVITGKPLTSSSEVEDLKDELERGLSEAASTLRSATDPSIQGTYAYESLRTAVQITISCLSNVSSKRPSIEDVLWNLQYTIQVQEAWTSSGNLSTKLTAGSS 757
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g0734 757 Gene3D Ribonuclease Inhibitor 226 358 IPR032675 -
Glsi05g0734 757 Gene3D Ribonuclease Inhibitor 43 225 IPR032675 -
Glsi05g0734 757 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 545 748 - -
Glsi05g0734 757 FunFam Probable LRR receptor-like serine/threonine-protein kinase At2g02780 43 224 - -
Glsi05g0734 757 Gene3D Phosphorylase Kinase; domain 1 433 530 - -
Glsi05g0734 757 ProSiteProfiles Protein kinase domain profile. 460 736 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi05g0734 757 Pfam Protein kinase domain 464 729 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi05g0734 757 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 226 733 - -
Glsi05g0734 757 Pfam Leucine rich repeat 159 217 IPR001611 GO:0005515
Glsi05g0734 757 SUPERFAMILY Protein kinase-like (PK-like) 442 733 IPR011009 -
Glsi05g0734 757 Gene3D Transferase(Phosphotransferase) domain 1 545 750 - -
Glsi05g0734 757 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 225 314 - -
Glsi05g0734 757 SUPERFAMILY L domain-like 50 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g0734 Glsi-ChrGlsi05 57826844 57829875 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g0734 38 673 Miscellaneous Gene Families AT2G02780 49.772 0.0 541
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Glsi05g0734 Pkinase 2.1e-16 CL0016