Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g0733 ATGCTACGCAGACTACCACATAAAATAGCCGCCGGGTTTTGCTCCATTGGCACATTGCCACGTGGCCCGAGAAATCCAGGCTATTTAGAAATCCTTAGCATTTGGGCTGTCTCTCTCCTCTGTCTCTACCACTGTCAACCACTGTCACTGCTGCAACAGAAGGGAAACTTTGCTCTAAAGCACAACCTTCTACTGCTTCCCTATGACTGTAATGGAGACTTAAGGTTCCTTCTGCTTCTGCTTGTGCTGCATTTCATGTACTGTTTTGATATAAAACCTTTGAGTAACCAGGATGTGCTGGGGTCTTCTGAGGCATCTGTGTCTTCTTTTCCTGTGGATTCCTCGCTGATATTGCCACCCACTTTTGGAGCTAATGCTACTAAAGAAGTGCATTTGGAAAAGATAGAAGTTAGTAGATCATCAAATGAGAGGGTTATTCTTTCATCTGGGGATGAAGAGACCGATGCTCAAGCAGTTGTGAATTCTGATTCACAGAATGATATTGAGAAAATCAGGCTTGCTCAAGCAGCTATAAAAGCTCAGGCTGCTTTTAGAGGCTATCAGGCTCGTCGGGAATTTCAATCACTCAAAGGTATCATACAACTGCAAGCTCTTATTCGTGGCCAATTGGTTAGAAGACAGGCTATTTCTACTTTACACTGTGTGAAGGGAATTGTAAAATTTCAAGCACTGGTTCGTGGTCACAATGTTAGACGTTCCGATATTGGGATTGCAGTCCTTAAAATTTGTAAGGATACTGAATGTTCAAATTCTATTGGAGCAGTTACAACTACACAGGCAGAGAAGCTGTCAAAAAGTGTCTTTGTTCAGAAGCTTCTGGCTTCATCATCCCCTACGGTTTCTTTACATCCCAATATGGATCCTGGAGAACCTAACATCTCTTCGGAGTGGCTTGACCGTTGGACAAAGTCAAACTTTTGGGCACCTCTTCCCAAATCGAAGAAGAAACTTGACTCAATGTCTGACGAAAAGAATGGCAGTTGTGAAACATTTGAAAATAACGAGGGCAAAGTTAAAAGAAATGCCCAGAAATCTTCTGATGTGAAGGCTGATGATGGCTCAATCCCAGATTCTAACAAATATAAACAGCATCCTAAAAAGGTTTCAAGCCGCCCAAAGCACTCATCCCAGGAGCATTCACAAGATGAAAATAAAAGCAGTATTAAAAAAACTTCTGTGCAGAGTGTTTCTGATAGATCTGAGGTTGCTAATGAGAAAAGAAAACACATCACTAGAAAATTTTCTGGTCATACTGTCACTAATGTTTCAGAGCATGGCCCAAGTGTTTCAGCAGAGAAAATGGAAAATTTGGTAGTGTCAAAATCAAATCAGTCTGCTTTTGAAAAAAGTCTTGGGCAGCAAGCAAAAGATGAGTTACACGGTAATCCTATTGCTGACTTGCAGAATAGCATAAACAATAGTAGAGATGAAGGTATTCGAGGAATTAGTGAGGACTTGAACTGTATTGACAATGGTATTAGCAATGTGAACCACAAGAACTGCCAGAGAAGAGCCTCACTGCCTGCCAATTTTGATAATCAAAATAATGGGACTCATAACACTCCAAGACTTCCCAGCTATATGGCCCCTACTGAATCTGCAAAAGCTAAGCTGAGAGCACAAGGGTCCCCAAGGTTTGCTAGTGACTTGATGGATAAAAATGGTATAACTAGGCGACATTCACTTTCATATTCATTGAATGGCAAGTTAGGCTCATTTACTCCACGAGCAGAGAGACTCTTAGCCATGAACAGCAGAGGAGTGATCAGGACTGACAGATCTCTGTCATCTTTAAGAGATGGAACTGAAAGGTTTATCCAACCCCAATGGAGAAGGGCTTTGTCATCGTGTATCACTCTTACAATTGTTTATATGTCAGTAGCTTTAAAATTTGGAAAAAAGCTTGTGTATGGATGTAATGTTCTTACATGGAAGGTGGCACCCAGAGTTCCCCCAAACACTTCAGTGGAGCTTCATGATGAGCTCATTTTTGAGACTAGTGAAGCCAATGAAGTGATCAGAGGAACTCTAGGGGACAACTGA 2064 0.4157 MLRRLPHKIAAGFCSIGTLPRGPRNPGYLEILSIWAVSLLCLYHCQPLSLLQQKGNFALKHNLLLLPYDCNGDLRFLLLLLVLHFMYCFDIKPLSNQDVLGSSEASVSSFPVDSSLILPPTFGANATKEVHLEKIEVSRSSNERVILSSGDEETDAQAVVNSDSQNDIEKIRLAQAAIKAQAAFRGYQARREFQSLKGIIQLQALIRGQLVRRQAISTLHCVKGIVKFQALVRGHNVRRSDIGIAVLKICKDTECSNSIGAVTTTQAEKLSKSVFVQKLLASSSPTVSLHPNMDPGEPNISSEWLDRWTKSNFWAPLPKSKKKLDSMSDEKNGSCETFENNEGKVKRNAQKSSDVKADDGSIPDSNKYKQHPKKVSSRPKHSSQEHSQDENKSSIKKTSVQSVSDRSEVANEKRKHITRKFSGHTVTNVSEHGPSVSAEKMENLVVSKSNQSAFEKSLGQQAKDELHGNPIADLQNSINNSRDEGIRGISEDLNCIDNGISNVNHKNCQRRASLPANFDNQNNGTHNTPRLPSYMAPTESAKAKLRAQGSPRFASDLMDKNGITRRHSLSYSLNGKLGSFTPRAERLLAMNSRGVIRTDRSLSSLRDGTERFIQPQWRRALSSCITLTIVYMSVALKFGKKLVYGCNVLTWKVAPRVPPNTSVELHDELIFETSEANEVIRGTLGDN 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g0733 687 Pfam IQ calmodulin-binding motif 197 214 IPR000048 GO:0005515
Glsi05g0733 687 Pfam IQ calmodulin-binding motif 223 239 IPR000048 GO:0005515
Glsi05g0733 687 Pfam IQ calmodulin-binding motif 175 194 IPR000048 GO:0005515
Glsi05g0733 687 ProSiteProfiles IQ motif profile. 173 201 IPR000048 GO:0005515
Glsi05g0733 687 MobiDBLite consensus disorder prediction 322 371 - -
Glsi05g0733 687 PANTHER IQ-DOMAIN 5-RELATED 148 572 - -
Glsi05g0733 687 MobiDBLite consensus disorder prediction 319 437 - -
Glsi05g0733 687 Pfam Protein of unknown function (DUF4005) 520 591 IPR025064 -
Glsi05g0733 687 ProSiteProfiles IQ motif profile. 197 224 IPR000048 GO:0005515
Glsi05g0733 687 SMART iq_5 196 216 IPR000048 GO:0005515
Glsi05g0733 687 SMART iq_5 172 194 IPR000048 GO:0005515
Glsi05g0733 687 MobiDBLite consensus disorder prediction 378 393 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g0733 Glsi-ChrGlsi05 57816250 57826418 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g0733 149 619 IQD Protein Family AT2G02790 36.047 2.34e-77 257