Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g0727 ATGCATTTGATTGATCAGAATTTGTTATTTGGACTAAATGGTATTAGCAATGTGAACCACAAGAACTGCCAGAGAAGAGCCTCACTGCCTGCCAATTTCGATAATCAAAGTAATGGAGCTCATAACACTCCAAAACTTCCCAGCTATATAGCCCCTACTGAATCTGCAAAAGCTAAGCTAAGAGCACAAGGGTCCCCAAGGTTTGCTAGTGACTTGATGGATAAAAATGGTATAACTAGGCGACATTCACTTTCATATTCATTGAATGGCAAGTTAGGCTCATTTACTCCACGAGCAGAGAGACTCTTAGCCACGAACAGCAGAGGAGTGATCAGGACTGACAGATCTCTGTCATCTTTAAGAGATGGAACTGGTTTATCCAACCCCAATGGAGAAGGTGATTTTGCATGTACAAGGATAATTCAAGGAGGTAAAGCAAATCTAGAAGAAGGATTTGTCATGCTTGAGATTAACTTTATCATCGTGTCTCCTCGAGGTGCTAACATTTTTGAAAATCCTCATTGTGCCACACAACCTTGGGGAGCATGGAATGGGGTGAAACCATCACCAGCTCCTTACGTAGAGATAATGTCAGGTGGCATCCAGAGTTCCCCCAAACACTTCAAGTCTCTCAACTTGGAATATTTTCTTCCAGATGGTCCTTGCATGGCATTGATTCCTAAAAGGCTAGGAACAAAAGCTCCACAGATGATATTGATTAAGAAAGTAATGGCGGATCATCAGCAGAACAAAAGAAGGCTCATCATGGAAGATGATGAAGATCATATCAGAAAACTTCCCACTGGCATTCTGAGCACCATTTTATCATCCCTTAAGGTCAGAGAAGCTGCCAGGACGAGCTTGATCTCAACTCAATGGAGGTGCCTTTGGACTACCCCAGCTAACCTCATATTTTATGCAGACAACATGCTGGAGCCAGAAGTTTACTCTGGTATAGATGTTCACAACATGATAGATCTGCAAAGTTACATCATCAAATTGAGAAGAACTTTAATCTTCATTAGGAATGTGAACCACTTCTTGTTAATTCTTGGTGAAGTCCCCGAGATAGAAAAGATGAAGGTTTACTTCACATTTTTCCACGAAAGGTATGCCAATCATCTTGATCGTTGGATTAACTTTGCTATTAGAAGAGAAGTTGAGGAGATTGATCTTTTCCTGTTCGAATATCATATCACTTCAGTGCTCCAAAAAATGTGTTCGCCCCATGTTTTCCCTTGTGATCTTCTTGCCAAGGAGTATGAAAGGGGCTTCAAGTCATCTTTAAGGCGCCTGCGCTTAGCACATTGCTGCTTTCCCAAAATGACTCCAATTTTTCTGATTTTAGCACTCTAA 1356 0.4122 MHLIDQNLLFGLNGISNVNHKNCQRRASLPANFDNQSNGAHNTPKLPSYIAPTESAKAKLRAQGSPRFASDLMDKNGITRRHSLSYSLNGKLGSFTPRAERLLATNSRGVIRTDRSLSSLRDGTGLSNPNGEGDFACTRIIQGGKANLEEGFVMLEINFIIVSPRGANIFENPHCATQPWGAWNGVKPSPAPYVEIMSGGIQSSPKHFKSLNLEYFLPDGPCMALIPKRLGTKAPQMILIKKVMADHQQNKRRLIMEDDEDHIRKLPTGILSTILSSLKVREAARTSLISTQWRCLWTTPANLIFYADNMLEPEVYSGIDVHNMIDLQSYIIKLRRTLIFIRNVNHFLLILGEVPEIEKMKVYFTFFHERYANHLDRWINFAIRREVEEIDLFLFEYHITSVLQKMCSPHVFPCDLLAKEYERGFKSSLRRLRLAHCCFPKMTPIFLILAL 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g0727 451 SUPERFAMILY F-box domain 260 302 IPR036047 GO:0005515
Glsi05g0727 451 PANTHER F-BOX PROTEIN-LIKE 262 439 - -
Glsi05g0727 451 Pfam Protein of unknown function (DUF4005) 35 108 IPR025064 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g0727 Glsi-ChrGlsi05 57716250 57722533 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g0727 13 122 IQD Protein Family AT2G02790 50.877 1.60e-26 110