Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g0713 ATGTGGAGCTCTGGATTTCGAGTTTGGACTACGGGTTGCATTTGTGTGGTGTTTATATCTGTAATTTCTGGTGCTTTATCTCTGGAACCCGAACTGGGATCTACCCGAGTCGTCTTTCAGACGAATTACGGGGACATTGAATTCGGTTTCTATCCTACTGTTGCACCCAAAACCGTTGATCACATTTTTAAACTTGTGCGACTTGGATGCTATAATACAAATCATTTCTTTCGGGTAGATAAGGGCTTTGTAGCTCAGGTAGCAGATGTTATGGGTGGAAGATCCGCTCCCATGAATGAAGAGCAAAGAAAAGAAGCTGAAAAGACTGTTGTTGGTGAATTTAGCCAAGTCAAACACATTAGGGGTATTCTTTCAATGGGAAGGTATAGTGATCCAGACAGTGCCGCATCCTCATTTTCAATGCTTCTTGGAGATGCTTCTCATCTTGATGGCCAGTATGCAATATTTGGAAGAGTTACTAAAGGTGATGATACATTGAAGAAGCTCGAGCAACTACCTACTCGTAAAGAGGGTATATTTGTAATGCCAACGGAACGTATCACTATTCTGTCATCTTATTACTATGACACTGAGACAGAAAATTGTGAACGGGACAGATCAAATTTGAAGCGCCGGCTAGCTGCATCAGCTGTTGAAATCGAACGACAGAGGATGAAATGCTTCCCCTGA 690 0.4232 MWSSGFRVWTTGCICVVFISVISGALSLEPELGSTRVVFQTNYGDIEFGFYPTVAPKTVDHIFKLVRLGCYNTNHFFRVDKGFVAQVADVMGGRSAPMNEEQRKEAEKTVVGEFSQVKHIRGILSMGRYSDPDSAASSFSMLLGDASHLDGQYAIFGRVTKGDDTLKKLEQLPTRKEGIFVMPTERITILSSYYYDTETENCERDRSNLKRRLAASAVEIERQRMKCFP 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g0713 229 SUPERFAMILY Cyclophilin-like 36 196 IPR029000 -
Glsi05g0713 229 Gene3D - 26 202 IPR029000 -
Glsi05g0713 229 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 151 166 IPR002130 GO:0000413|GO:0003755
Glsi05g0713 229 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 50 65 IPR002130 GO:0000413|GO:0003755
Glsi05g0713 229 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 76 88 IPR002130 GO:0000413|GO:0003755
Glsi05g0713 229 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 122 137 IPR002130 GO:0000413|GO:0003755
Glsi05g0713 229 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP23 9 229 IPR044233 -
Glsi05g0713 229 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 37 191 IPR002130 GO:0000413|GO:0003755
Glsi05g0713 229 CDD cyclophilin 38 191 - -
Glsi05g0713 229 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 38 194 IPR002130 GO:0000413|GO:0003755
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g0713 37 195 U-box Gene Family AT5G67530 28.743 2.31e-11 60.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi05g0713 05 57519422 57524396 Glsi05g0713 05 57519422 57524396 ECH