Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g0695 ATGTGGAGGTTGCTTTGCGAGTTGTGCAAGCTGACAGACCCTAGAAATATTGATGTCAGTAGTGTTGGAAAAAAAAAAGATTCACAGAAGGTGGAGTGCAGTTCCACGTTACATGCTTGGTTGATTTCAGATATAAATACCAGTTGTGATCAGAAAGGTGATGCTGATATTATGCCTATTCTTAAACCCTTTTCTCTACCTGACAAACTCAGTGGAATAGAAGCTCTGGGGAATGGAATAGAAACGGGATTTTCGGATTCTGAGAAACCTGCAAATCAATACTATAATCCTAATACTGGTTTTGGTTGTAATCTTGAAGAGACAAAAGGGTTTGCTATAACTCTAAGAATAGGTTTAGATATGGAAGAGAGACATGATGGTGAGAAACTTGATGAAGTGATGCTACCTGGGTTCAGGTTTCATCCAACTGATGAGGAGCTTGTTGGGTTTTATCTCAAGAGAAAGATTCAGCAGCGACCTCTCTCTATTGAGCTCATAAAGCAGCTTGATATCTACAAGTATGATCCATGGGATCTTCCAAAGTTGGCAAGTACAGGAGAGAAAGAGTGGTATTTCTACTGTCCTAGAGACAGAAAATACAGGAACAGCGCGAGGCCTAATAGGGTTACAGGAGCTGGTTTCTGGAAGGCTACTGGGACTGATAGGCCTATTTACTCCTCCGAGGGTTCCAAGTGCATTGGCTTGAAGAAGTCTCTAGTTTTTTACAGAGGAAGAGCTGCTAAAGGGGTCAAAACTGACTGGATGATGCATGAGTTTAGACTTCCCTCTCTCATAGACTCTTCATCGCCAAAAAAGTACATAGAAAAGAGCATCCCTGCTAATGACTCATGGGCAATCTGCAGGATATTCAAGAAAACCAATTCTACAGCTCAAAGAACTCTCTCTCACTCCTGGGTTTCTCCCTTACCTGAAATGAACACCTCTGATGTGCTAACCAAAGAAGACACTACCCATTTTTGTTCAGACAACAACATGTCATTTACGAAGAAAACAACCTTAGCCAGCAATGACATAGTGACACAACACCTAACGCCCACTACTAGTAGTACTACTACTTTTTGCCCTTTGGATCTTCCCTCTAATTACAAACCCATTATTAACCCATTCTTGCTTTACAAACCCTTTGATCAATTACCCATTATTTCAAATGGAGACCAAAGCACCACCAACTTAATGTTCTCATCTCCTTTTGAAGCATCTAAATCCACCATGGATCTTTCTTCCATGTTGTTGAACATGTCATCATCTGTGCTTGGAGACTTTGGCAAGACATCAGAAAATGCAAACTTTGAAGGGTTTCAAGAGCATAGTAATAATGGGTACCCAATAGCTTTAATGGAGAACAACGAAGGCAATAATAATGGAGGATTAGTGAAGATTCCTAATGTGAATAATGTGCCTCGAGTGGATGACCAAGTGTTGGAGACAGTAAGATCTAATGTTGGGTTTCCATTGCCTTTGAATATTGGGGACGCATGGAAGTCAAATCTGCTTTGGGATAGTTCCTCGTGTCCTTGTGATCATGTGCCCTCAAGTTATAATTCCACAACCAAGTGCTATACTTAG 1587 0.4089 MWRLLCELCKLTDPRNIDVSSVGKKKDSQKVECSSTLHAWLISDINTSCDQKGDADIMPILKPFSLPDKLSGIEALGNGIETGFSDSEKPANQYYNPNTGFGCNLEETKGFAITLRIGLDMEERHDGEKLDEVMLPGFRFHPTDEELVGFYLKRKIQQRPLSIELIKQLDIYKYDPWDLPKLASTGEKEWYFYCPRDRKYRNSARPNRVTGAGFWKATGTDRPIYSSEGSKCIGLKKSLVFYRGRAAKGVKTDWMMHEFRLPSLIDSSSPKKYIEKSIPANDSWAICRIFKKTNSTAQRTLSHSWVSPLPEMNTSDVLTKEDTTHFCSDNNMSFTKKTTLASNDIVTQHLTPTTSSTTTFCPLDLPSNYKPIINPFLLYKPFDQLPIISNGDQSTTNLMFSSPFEASKSTMDLSSMLLNMSSSVLGDFGKTSENANFEGFQEHSNNGYPIALMENNEGNNNGGLVKIPNVNNVPRVDDQVLETVRSNVGFPLPLNIGDAWKSNLLWDSSSCPCDHVPSSYNSTTKCYT 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g0695 528 SUPERFAMILY NAC domain 133 292 IPR036093 GO:0003677|GO:0006355
Glsi05g0695 528 FunFam NAC domain-containing protein 35 143 295 - -
Glsi05g0695 528 Gene3D NAC domain 143 297 IPR036093 GO:0003677|GO:0006355
Glsi05g0695 528 ProSiteProfiles NAC domain profile. 134 292 IPR003441 GO:0003677|GO:0006355
Glsi05g0695 528 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 132 359 - -
Glsi05g0695 528 Pfam No apical meristem (NAM) protein 136 261 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g0695 Glsi-ChrGlsi05 57378938 57385636 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g0695 122 428 NAC Transcription Factor Family AT1G26870 55.828 1.57e-109 331
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Glsi05g0695 NAM 8.4e-37 No_clan