Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g0686 ATGGAGAATTACGTGGTATCTTTTGGAATCTTCAGCTTGAGAGAAAAATCTTTAGCAAAAAGAAGTTTGGATGGTAAGCTTCCCCCAAAGTCCAAGGACAAGGATGACGTGGCATGCTCTCAGGGCTACTCCTATTGAAGAGTAATTTCCCGATCCTCTGGGAATCACCCGAAAGTGAAACAAGAGCCTTGTAAAGAAGTGATCATGACATAGCAGCAAGGGATTGGTTTGCCTGAAACACATAATATGGAGAGGCAAAACCAGCTTGTCCTTGAAGCTCCATATTCAGAGCAACCCAGTAGAGGAACCACCTTCTTCAAAACTTGTTTCAATGCAATCAACGCCACGTCAGGTATTGGGATACTCTCAGTGCCATATGCATTTTCTCAAGGAGGGTGGGTGAGTTTAATTCTGCTACTTATCATTGCAATTATGAGTTTTTACAGCGGGTTACTTCTCAATCGGTGTATGGATGAAAGACCACTCATCAAAACCTACCCAGATATAGGAGAGCAGGCTTTTGGGTACAAAGGAAGAGTTGTGGTAGCCATATTTATGTATCTAGAGCTGTACTTGGTTGCCACAGAGTTCATAATACTAGAAGGTGACAATTTGGAGAAGTTGTTTCCAAACATGCACTTCAAAGTTGGTGCCCTTAGAATTGCAGGCAATAAAGGCTTTATGCTGGTCACCGCCCTAGTGATATTGCCAACAACATGGCTAAGAAGCTTGGGAGTTCTGGCTTACATTGCTGTTAGTGGGGTGGTGGCTTCAATTATTTTGGTTCTTTGTGTTTTGTCGGTGGGTGCAGTTGATGGTGTAGGGTTTCATGAAAGAGGCCAGGTAGTTAACTGGAAAGGATTGCCTACTTCTGTGAGCATCTTTGCTTTTTGTTATTGTGCCCATCCTATTTTTCCCACCTTACGCAATTCCATGAAAGATACCAGACAATTTGCCAAGGTTCTGCTTGTCTGTTTTGTCACAAGCACCATAACCTATGGATCCATGGCCATTATAGGCTACTTGATGTATGGGGTTTATTTGAAGTCTCAAGTGACCTTAAATCTTCCAGTAAACAAAATAAGCACCAAAATAGCAATTTATACCACATTAATTAATCCCTTCGCTAAGTATGCAGTTCTAATCACTCCTATTGCCATGGCCATTGAGGAAAAATTTCTTTTCCACAAGAGCAGGCCTATTGGCATCATCATAAGGACAGCCCTTGTGATAAGCTCTTTACTTGTGGCTCTATTCATTCCCTTTTTTGCTTACCTTATGGTTTTTATTGGTGCTTTCTTGAGTGTCACAGGCTCACTGTTGTTACCTTGCCTGTGCTACCTAAAGATAAATAAAGCTGCTCAAAAATTTGGGTTAGAGTTGATGATCATTATAGGGATTCTGCTGATAGGATCGTTCATTGGTGTAGCGGGTACCTACAACTCTGTAAGGCAGATAGTAACACATCTGCAGAAACCATGA 1482 0.417 MENYVVSFGIFSLREKSLAKRSLDGKLPPKSKDKDDVACSQGYSYXRVISRSSGNHPKVKQEPCKEVIMTXQQGIGLPETHNMERQNQLVLEAPYSEQPSRGTTFFKTCFNAINATSGIGILSVPYAFSQGGWVSLILLLIIAIMSFYSGLLLNRCMDERPLIKTYPDIGEQAFGYKGRVVVAIFMYLELYLVATEFIILEGDNLEKLFPNMHFKVGALRIAGNKGFMLVTALVILPTTWLRSLGVLAYIAVSGVVASIILVLCVLSVGAVDGVGFHERGQVVNWKGLPTSVSIFAFCYCAHPIFPTLRNSMKDTRQFAKVLLVCFVTSTITYGSMAIIGYLMYGVYLKSQVTLNLPVNKISTKIAIYTTLINPFAKYAVLITPIAMAIEEKFLFHKSRPIGIIIRTALVISSLLVALFIPFFAYLMVFIGAFLSVTGSLLLPCLCYLKINKAAQKFGLELMIIIGILLIGSFIGVAGTYNSVRQIVTHLQKP 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g0686 493 Pfam Transmembrane amino acid transporter protein 102 479 IPR013057 -
Glsi05g0686 493 PANTHER OS05G0424000 PROTEIN-RELATED 110 466 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g0686 Glsi-ChrGlsi05 57318207 57322312 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g0686 83 487 Amino Acid or Auxin Permease AAAP Family AT3G28960 50.860 1.70e-147 426