Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g0678 ATGGAGAGGAAAAACCAACTTGACCTTGAAGCTCCATATTCAGAGCAACCCAATAGAGGAACAACCTTCTTCAAAACTTGTTTCAATGCAATCAACACCATGTCAGGTATTGGGATACTCTCAGTGCCATATGCATTTTCTCAAGGAGGGTGGGTGTGTTTAATTCTGCTACTTCTCATTGCAAGTCTCAGCTTATACAGCGGGTTACTTCTCAAAAGGTGTATGGATGACAGACCACTCATCAAAACCTACCCAGATATAGGAGAGGAGGCTTTTGGGTACAAAGGAAAAGTAGTGGTAGCCATATTTATTAAAGGCTTTATGCTGCTTACTGCCCTAGTGATATTGCCAACAACATGGCTAAGAAGCTTGGGAGTTCTGGCTTACATTTCTGTTGGCGGGGTGTTGGCTTCAATTATTTTGGTTCTCTCTGTTTTGTGGGTGGGTGCAGTTGATGGTGTAGGGTTTCATGAAAGAGGGCAGTTGGTTAACTGGGGAGGATTGCCTACTTCTTTGAGCATCTTTGCTTTCTGTTATGGTGCCCATCCTGTTTTTCCCACCCTACGCAATTCCATGAAAGATACCAAACAATTTGGCAAGGTTCTGCTTGTCTCTTTTGTCACAAGCACCATAACCTATGGATCCATGGCCATTATAGGCTACTTGATGTTTGGGGCCTATTTGAAGTCTCAAGTAACCTTAAATCTTCCAGTACACAAAATAAGCAGCAAAATAGCAATTTATACCACAATAATTAATCCCGTCACTAAGTATGCAGTTCTAATCACTCCTGTTGCCATGGCCATTGAGGAAAATTTTAGTTTCCACAAGAGCAGGCCTATTGGCATCATCATAAGAACAGCCCTTGTGATAATCTCTCTAATTGTGGCTGTATTCATTCCCTTTTTTGCTTACCTTATGGCTCTGATTGGTGCTTTCTTGACTGTCACAAGCGCAATCTTGTTACCTTGCCTGTGCTACCTAAAGATAAATAAAGCTGCTCAAAAATTTGGGATAGAGTTGATGATCATTATAGGGATTCTGCTGATAGGATCATTCATCGGTGTAGTGGGTACCTACATCTCTGTGAGGCAGATAGTAACACATCTGCAGAAGCCATGA 1122 0.4189 MERKNQLDLEAPYSEQPNRGTTFFKTCFNAINTMSGIGILSVPYAFSQGGWVCLILLLLIASLSLYSGLLLKRCMDDRPLIKTYPDIGEEAFGYKGKVVVAIFIKGFMLLTALVILPTTWLRSLGVLAYISVGGVLASIILVLSVLWVGAVDGVGFHERGQLVNWGGLPTSLSIFAFCYGAHPVFPTLRNSMKDTKQFGKVLLVSFVTSTITYGSMAIIGYLMFGAYLKSQVTLNLPVHKISSKIAIYTTIINPVTKYAVLITPVAMAIEENFSFHKSRPIGIIIRTALVIISLIVAVFIPFFAYLMALIGAFLTVTSAILLPCLCYLKINKAAQKFGIELMIIIGILLIGSFIGVVGTYISVRQIVTHLQKP 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g0678 373 Pfam Transmembrane amino acid transporter protein 107 360 IPR013057 -
Glsi05g0678 373 Pfam Transmembrane amino acid transporter protein 20 103 IPR013057 -
Glsi05g0678 373 PANTHER AMINO ACID TRANSPORTER 13 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g0678 Glsi-ChrGlsi05 57243990 57246347 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g0678 1 367 Amino Acid or Auxin Permease AAAP Family AT3G28960 46.569 2.88e-129 375