Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Glsi05g0674 | ATGGCTTCAGAACCCCAGGCGTCTGAGATTTCGTCACTGTTCGAGAGGATGGTAAGAAACAGAGACCTCTCTCTGTTTTTTCCTTTTATCTTCGGCTTATCATCAAACGCTGCTCCTAGAAGAGATAGTGAAGACCCAGGTGAGGAAAATGATAGTGCAGATAGTACCCAGCGTGAAAGAATTATCTTGGTAAACCCCTTTACTCAGGGCATGGTGGTGATCGATGGAGCTTCGAGCCTGGAGACTCTGTTTCGCGAAATGGGTATTAAAGAAGGGCAACCTCCGGCATCCAAGGAATCCATAGATGCCATGGCAAGTGTTGAAATTGGGGAAGGTGAAGATGGGGAGTGTGTGATTTGTTTGGAGGAGTACGAGGTTGGTGGAGCGGCTAAGGAGATGCCTTGCAAGCATAAATTTCATCCAAATTGTATAGAGAAGTGGCTGGGGATTCATGGGTCTTGCCCTGTGTGCAGGTACCAGATGCCTGTTGACGAGGAAGATGTGGGCAAGAAGAGAGATGAAGAAGGGGGAGAGAGGAGGAGGAGGGTTGGTAGAGAAGTTTGGGTTAGTTTCTCTTTCAATAGCGATAGGAGAAGTGAGGATTCAAATCAAGCTCCTTCTGGTGATTCCACATCTGATTCTTCATCAAGTCCAAGAGGTGATGCAGAGGTAGAAAATTGA | 681 | 0.4699 | MASEPQASEISSLFERMVRNRDLSLFFPFIFGLSSNAAPRRDSEDPGEENDSADSTQRERIILVNPFTQGMVVIDGASSLETLFREMGIKEGQPPASKESIDAMASVEIGEGEDGECVICLEEYEVGGAAKEMPCKHKFHPNCIEKWLGIHGSCPVCRYQMPVDEEDVGKKRDEEGGERRRRVGREVWVSFSFNSDRRSEDSNQAPSGDSTSDSSSSPRGDAEVEN | 226 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Glsi05g0674 | 226 | MobiDBLite | consensus disorder prediction | 36 | 59 | - | - | |
Glsi05g0674 | 226 | MobiDBLite | consensus disorder prediction | 41 | 56 | - | - | |
Glsi05g0674 | 226 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE PRAJA | 50 | 162 | - | - | |
Glsi05g0674 | 226 | MobiDBLite | consensus disorder prediction | 194 | 219 | - | - | |
Glsi05g0674 | 226 | FunFam | E3 ubiquitin-protein ligase RNF181 | 85 | 164 | - | - | |
Glsi05g0674 | 226 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 84 | 164 | IPR013083 | - | |
Glsi05g0674 | 226 | MobiDBLite | consensus disorder prediction | 194 | 226 | - | - | |
Glsi05g0674 | 226 | SUPERFAMILY | RING/U-box | 100 | 164 | - | - | |
Glsi05g0674 | 226 | ProSiteProfiles | Zinc finger RING-type profile. | 117 | 158 | IPR001841 | - | |
Glsi05g0674 | 226 | SMART | ring_2 | 117 | 157 | IPR001841 | - | |
Glsi05g0674 | 226 | Pfam | Ring finger domain | 116 | 158 | IPR001841 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Glsi05g0674 | Glsi-ChrGlsi05 | 57211554 | 57212234 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Glsi05g0674 | 1 | 210 | C3H Transcription Factor Family | AT1G26800 | 51.628 | 8.82e-70 | 211 |