Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g0674 ATGGCTTCAGAACCCCAGGCGTCTGAGATTTCGTCACTGTTCGAGAGGATGGTAAGAAACAGAGACCTCTCTCTGTTTTTTCCTTTTATCTTCGGCTTATCATCAAACGCTGCTCCTAGAAGAGATAGTGAAGACCCAGGTGAGGAAAATGATAGTGCAGATAGTACCCAGCGTGAAAGAATTATCTTGGTAAACCCCTTTACTCAGGGCATGGTGGTGATCGATGGAGCTTCGAGCCTGGAGACTCTGTTTCGCGAAATGGGTATTAAAGAAGGGCAACCTCCGGCATCCAAGGAATCCATAGATGCCATGGCAAGTGTTGAAATTGGGGAAGGTGAAGATGGGGAGTGTGTGATTTGTTTGGAGGAGTACGAGGTTGGTGGAGCGGCTAAGGAGATGCCTTGCAAGCATAAATTTCATCCAAATTGTATAGAGAAGTGGCTGGGGATTCATGGGTCTTGCCCTGTGTGCAGGTACCAGATGCCTGTTGACGAGGAAGATGTGGGCAAGAAGAGAGATGAAGAAGGGGGAGAGAGGAGGAGGAGGGTTGGTAGAGAAGTTTGGGTTAGTTTCTCTTTCAATAGCGATAGGAGAAGTGAGGATTCAAATCAAGCTCCTTCTGGTGATTCCACATCTGATTCTTCATCAAGTCCAAGAGGTGATGCAGAGGTAGAAAATTGA 681 0.4699 MASEPQASEISSLFERMVRNRDLSLFFPFIFGLSSNAAPRRDSEDPGEENDSADSTQRERIILVNPFTQGMVVIDGASSLETLFREMGIKEGQPPASKESIDAMASVEIGEGEDGECVICLEEYEVGGAAKEMPCKHKFHPNCIEKWLGIHGSCPVCRYQMPVDEEDVGKKRDEEGGERRRRVGREVWVSFSFNSDRRSEDSNQAPSGDSTSDSSSSPRGDAEVEN 226
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g0674 226 MobiDBLite consensus disorder prediction 36 59 - -
Glsi05g0674 226 MobiDBLite consensus disorder prediction 41 56 - -
Glsi05g0674 226 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 50 162 - -
Glsi05g0674 226 MobiDBLite consensus disorder prediction 194 219 - -
Glsi05g0674 226 FunFam E3 ubiquitin-protein ligase RNF181 85 164 - -
Glsi05g0674 226 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 84 164 IPR013083 -
Glsi05g0674 226 MobiDBLite consensus disorder prediction 194 226 - -
Glsi05g0674 226 SUPERFAMILY RING/U-box 100 164 - -
Glsi05g0674 226 ProSiteProfiles Zinc finger RING-type profile. 117 158 IPR001841 -
Glsi05g0674 226 SMART ring_2 117 157 IPR001841 -
Glsi05g0674 226 Pfam Ring finger domain 116 158 IPR001841 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Glsi05g0674 Glsi-ChrGlsi05 57211554 57212234 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g0674 1 210 C3H Transcription Factor Family AT1G26800 51.628 8.82e-70 211