Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g0672 ATGAAACGGGGCGTTGGCATCCAAAACCCAAAACGCCATGCTGCTTTTAAGCCAAAGCAGCAAAGCAATGTGAATACCCTGATGTCAAAATCCCATCTTGGGTTTTACTGCATTTGCCTCCAGGGGCATCTTAGTGCATATGGAAGATTAGATAGAGCTACTAGAGCTTGCTGTACTCAACAAGCCCCTCAATTACGAATTAAGCTCCCTTTTTTGCTGTCTTACATTTCACTAGCAGTTGCAGTTTGGTGTCAGTCAACTGGTCAGGATAGTTTAGCTCTTCCAATGGCATGTTTAAAAGAAACATGGTGTTTTGAAGACCAATCATTGGATTTTGATTCCAGTGATCGACCTCTTGATCGCCACCCAAGAAATCTGAAGAGTGACTCAATCAAACCGACTTTTCAAGATCTGACAGCACAACAACTCCAACTTATAAAGAGAACCATAGCTAAAAGGAACAAAAGACATATTCATGTTTCACTCCAGTACCAGAAACTCATCCAAAAGAAGCAAATGGATCTGCAAAATATGCAAAGCCAAACCATGCATTTAGTTCTGTCATCTGATGCCAAGCCGAGGCTGAGATGGACTCCCGAGCTTCACCAAAGATTCCTCGAGGCGGTTAATCAGCTCGGAGGGCCAGAAAAAGCAACCCCAAAGAGTCTTATGAGGGTGATGGGGATTCCAGGACTTACCTTGTACCACTTGAAGAGCCATTTACAGAAATTCAGACTTGGGAAAAACCCACAGCCAGAAACCTGCTATGAGGATAATGAAGAAGATTATAGAGAAAGCCATGGCAGTAATGATCATTGCAGTAGGGAAATCAGTGTGGGGACCCCGAATCAGATGACTGAAACCCTGCAGATTGCTCAAGCTCTCCAAATGCAATTGGAAGTACAGAGGAAGCTTTATGAACAAATTGAGGTGCAGAGGCATTTGCAGCTTAGAATTGAAGCTCAAGGGAAGTACTTACAATCAGTGTTAATGAAAGCTCAGGAAGCACTTGCCGGATCCAATTCTTCTGCGGGCGGTGTAGAAGTTGCAAAAGCTGAACTCTCTCAATTAGTCTCAATAATTAACAATGCCTGCCCAACTTCCCCCATCTCTGAACTGACAGAAACAAGAGTGTTCAGTTTAAAAGATGGAGAAAGGAAGCAAAAAAGGGGGACTATGTGTTCATTGGAGAGTTCCTTGACATCTTCTGAAAGCTCAGGAAGAAAGGAAGACGAGCAGCCAGTGGAAGAAAGAGGTAATAGAACTTCAGTTGAACTTCAATTGATGACCATTCACCCAGAAAATGAAGCATTAAATGGTGATACAAAGAATCAAGCTTGTGGGAGGAAGAGAAGTGGAGCCATTGTTTCTGATAGTTACTCTGTTGAGCAACCAATGAGTAAAAGATTTGGGAACAAGTTGAGGAAATCAGAGTGGTCTGAAATGCTTGACTTGAACAGCCAATCTAAGAGTGACATCGACTCAGCCTCAAAAACAGCAATAGACTTGAATTGCAGCTCAATGAGCAGTTCTAGCTTTCTTGAATCTTGA 1551 0.4268 MKRGVGIQNPKRHAAFKPKQQSNVNTLMSKSHLGFYCICLQGHLSAYGRLDRATRACCTQQAPQLRIKLPFLLSYISLAVAVWCQSTGQDSLALPMACLKETWCFEDQSLDFDSSDRPLDRHPRNLKSDSIKPTFQDLTAQQLQLIKRTIAKRNKRHIHVSLQYQKLIQKKQMDLQNMQSQTMHLVLSSDAKPRLRWTPELHQRFLEAVNQLGGPEKATPKSLMRVMGIPGLTLYHLKSHLQKFRLGKNPQPETCYEDNEEDYRESHGSNDHCSREISVGTPNQMTETLQIAQALQMQLEVQRKLYEQIEVQRHLQLRIEAQGKYLQSVLMKAQEALAGSNSSAGGVEVAKAELSQLVSIINNACPTSPISELTETRVFSLKDGERKQKRGTMCSLESSLTSSESSGRKEDEQPVEERGNRTSVELQLMTIHPENEALNGDTKNQACGRKRSGAIVSDSYSVEQPMSKRFGNKLRKSEWSEMLDLNSQSKSDIDSASKTAIDLNCSSMSSSSFLES 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g0672 516 Gene3D - 191 249 - -
Glsi05g0672 516 Coils Coil 292 312 - -
Glsi05g0672 516 MobiDBLite consensus disorder prediction 249 277 - -
Glsi05g0672 516 Pfam Myb-like DNA-binding domain 195 243 IPR001005 -
Glsi05g0672 516 Pfam MYB-CC type transfactor, LHEQLE motif 289 335 IPR025756 -
Glsi05g0672 516 NCBIfam myb-like DNA-binding domain, SHAQKYF class 192 247 IPR006447 GO:0003677
Glsi05g0672 516 MobiDBLite consensus disorder prediction 404 419 - -
Glsi05g0672 516 MobiDBLite consensus disorder prediction 389 423 - -
Glsi05g0672 516 MobiDBLite consensus disorder prediction 254 272 - -
Glsi05g0672 516 FunFam Myb family transcription factor 191 249 - -
Glsi05g0672 516 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 170 433 IPR044848 GO:0003700
Glsi05g0672 516 SUPERFAMILY Homeodomain-like 191 247 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g0672 Glsi-ChrGlsi05 57199871 57207313 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g0672 183 471 G2-like Transcription Factor Family AT1G69580 50.327 1.99e-74 237
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Glsi05g0672 Myb_DNA-binding 1e-06 CL0123