Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g0608 ATGGAAGACAAGGACAAAGACAAAGCAGCATCCCGCCCTGCAACTACAACGGCTGAGTTCACTAGCGAGTCCAGCTGGGCACTCGGACCTGATGAATCCGACGGTGTCTATTTCTTCTCTGGCGACAGAGACAGCAGCATACTCAGCGAGTTTGGCTGGAATCTCGAGCCGGACCAGCCTCACCGGATCGGTGCCCACGATACGTCGTCGGATTTTGCAGGAGGAGAAGGAGGAGGAGGATTGTGGTTCCCGGCTCACTCTGCTCCGTGTGGTTCGATGGAACAGGCCGATAAGGTAGCAGCAGCGGCGGCGGACGTTTCGACGTCTAATAATCAATCGGTGTCTTCGAGCTCCAGTGAGGATCCGCCAGAGAAGTCCACCGTCTCAGACGAAAAGCCACCGGAGACACCGAGTAAAAGTAAAAAGAAGGGGCAAAAGCGAATACGGCAGCCACGGTTTGCATTTATGACCAAAAGTGAAGTTGATCATCTTGAGGATGGCTACAGATGGCGCAAGTATGGTCAGAAGGCCGTAAAAAATAGTCCATTTCCTAGGAGCTACTATCGTTGCACAAATAGCAAATGCACGGTGAAGAAAAGGGTGGAACGGTCCTCCCAGGACCCAACCGTTGTGATAACTACATATGAAGGCCAACACTGTCATCACACAGTTGGGTTCCCTCGAGGGGGAGGAGGAATCACGAGCCACGAAGCTGCAGCCTTCGCCGCCGCCAGCCAGTTAGCTCCATCTACAATGTCGCAGTTCTATTATCCAATCCAATTACCAAGAGATCAACATACCCTTAGTATTAATTCCCAGCCTCACCTACAGGATCATGAACAGGCTGGAGGAGAATCCAGCAGCAGCACTGTAATGCCAGATGTAGCCTCGCAGCCTCCCACTGATGAAGGACTTCTCGGAGATATTGTGCCCCCAGGAATGCGTAGCAGATGA 954 0.5241 MEDKDKDKAASRPATTTAEFTSESSWALGPDESDGVYFFSGDRDSSILSEFGWNLEPDQPHRIGAHDTSSDFAGGEGGGGLWFPAHSAPCGSMEQADKVAAAAADVSTSNNQSVSSSSSEDPPEKSTVSDEKPPETPSKSKKKGQKRIRQPRFAFMTKSEVDHLEDGYRWRKYGQKAVKNSPFPRSYYRCTNSKCTVKKRVERSSQDPTVVITTYEGQHCHHTVGFPRGGGGITSHEAAAFAAASQLAPSTMSQFYYPIQLPRDQHTLSINSQPHLQDHEQAGGESSSSTVMPDVASQPPTDEGLLGDIVPPGMRSR 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g0608 317 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 108 268 IPR044810 GO:0003700
Glsi05g0608 317 MobiDBLite consensus disorder prediction 14 28 - -
Glsi05g0608 317 MobiDBLite consensus disorder prediction 271 296 - -
Glsi05g0608 317 Pfam WRKY DNA -binding domain 165 221 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi05g0608 317 ProSiteProfiles WRKY domain profile. 159 224 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi05g0608 317 Gene3D WRKY domain 151 217 IPR036576 GO:0003700|GO:0006355|GO:0043565
Glsi05g0608 317 MobiDBLite consensus disorder prediction 57 153 - -
Glsi05g0608 317 SUPERFAMILY WRKY DNA-binding domain 156 222 IPR036576 GO:0003700|GO:0006355|GO:0043565
Glsi05g0608 317 MobiDBLite consensus disorder prediction 1 33 - -
Glsi05g0608 317 SMART WRKY_cls 164 223 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi05g0608 317 MobiDBLite consensus disorder prediction 124 141 - -
Glsi05g0608 317 FunFam WRKY transcription factor 57 150 224 - -
Glsi05g0608 317 MobiDBLite consensus disorder prediction 104 123 - -
Glsi05g0608 317 MobiDBLite consensus disorder prediction 271 317 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g0608 Glsi-ChrGlsi05 56635766 56638759 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g0608 38 316 WRKY Transcription Factor Family AT1G69310 52.941 2.38e-78 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Glsi05g0608 WRKY 4.2e-25 CL0274