Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g0586 ATGTCTCTTGAATACCTTCTCTTCTTCCCTGAGCTGGTTCAGCCACCTATCTTCACTTTTCAAGCCGTTCTTTGTGCTCTTTTATTCATGGCCATCTTCGTGTTCTGGCTTTCTCCTGGTGGACTTGCCTGGGTTTTCTGCAAGTCCCAATCTCTGTCCGTGATTCCGGGTCCTTCGGGACACCCGGCGACTGGGTTGCTCCATATTTTCACTGGGTTAACGCCACATCGAGCTCTGGCCAAGATGGCTCGGAGTTTCAACGCCGAGTCATTAATGGCGTTCTCGGTTGGGCTGACTCGGTTCGTCATTTCCAGCGAGCCAAGCACGGCGAAGGAGATTCTCAACAGCTCGGCTTTCGCCAATAGACCCGTGAAAGAGTCGGCTTATGAGCTTCTCTTTCACAGAGCTATGGGTTTCGCCCCATACGGCGACTACTGGAGGAATCTCAGGAGAATCTCTTCCACCCACTTGTTCTGTCCCAACAGAATATCTAGTTTTGAAAATTCAAGACAAGAAATGGGGATACAGATGGTAAATCATCTCAAATCCTCCATGGAAAAGAAAGGTGAAGTTGAGGTAAAGAAGGTGCTCCATTTTGGGTCGCTGAACAATGTGATGATCACTGTGTTCGGGAAGAGCTATGAGTTCAATGAACATGGTGATGGGTTGGAGCTTGAAGAATTGGTTAGGGAAGGGTACGAGTTACTGGGAATTTTCAATTGGAGTGACCATTTTCCTCTTCTGGGATGGTTGGATTTGCAAGGAGTGAGGAGGAGATGCAGGTGTTTGGTGGCTAAAGTGAATGCCTTCGTTGGAAAGATAATAGAGGAGCATAGAAGGAAGAGGGATTCTGGAGATTACGTTCTTGGAAGCGTAGGGGATTTTGTTGATGTCTTGCTTGATTTGGAGAAAGATCAGAAACTTAATGATTCTGATATGATCGCTGTTCTTTGGGAACTGATCTTCAGAGGAACTGATACAGTGGCAATCTTGCTGGAATGGATTATAGCAAGAATGGTTCTACACCCAGAAATCCAAGCCAAAGCCCAGTCTGAAATAGACGCTATAGTTGGAACTTCCAAGCTGGTTTCTGACTCAGACATTCCAAATCTCCGTTATCTCCAGTGCATCGTAAAAGAGGCTCTGAGGGTGCACCCACCCGGGCCACTGCTCTCATGGGCCCGTCTCGCTGTACACGACATCCAGGTCGGCGACAAGTTCATTCCGGCCGGGACGACGGCGATGGTCAACATGTGGGCAATCACTCACAGCGAAAAGGTGTGGAAGGAGCCAGAGAGGTTCGAGCCTGAGCGGTTTATGGCAGAGGAGGTTAGCATAATGGGGTCTGATTTGAGGTTGGCTCCTTTTGGGTCTGGGAGAAGGGTCTGTCCTGGGAAGGCCATGGGCTTGACCACGGTTCATCTGTGGCTGGCTCAGCTGCTGCAGAACTTCAAATGGGTTGGGTCTGAAACTGGCTCCGTGGACTTGTCTGAGTGCTTGAAGCTGTCCATGGAGATGAAGACCCCTCTTGTTTGCAGGGTCATTCCTAGGGTTACTTGA 1560 0.4917 MSLEYLLFFPELVQPPIFTFQAVLCALLFMAIFVFWLSPGGLAWVFCKSQSLSVIPGPSGHPATGLLHIFTGLTPHRALAKMARSFNAESLMAFSVGLTRFVISSEPSTAKEILNSSAFANRPVKESAYELLFHRAMGFAPYGDYWRNLRRISSTHLFCPNRISSFENSRQEMGIQMVNHLKSSMEKKGEVEVKKVLHFGSLNNVMITVFGKSYEFNEHGDGLELEELVREGYELLGIFNWSDHFPLLGWLDLQGVRRRCRCLVAKVNAFVGKIIEEHRRKRDSGDYVLGSVGDFVDVLLDLEKDQKLNDSDMIAVLWELIFRGTDTVAILLEWIIARMVLHPEIQAKAQSEIDAIVGTSKLVSDSDIPNLRYLQCIVKEALRVHPPGPLLSWARLAVHDIQVGDKFIPAGTTAMVNMWAITHSEKVWKEPERFEPERFMAEEVSIMGSDLRLAPFGSGRRVCPGKAMGLTTVHLWLAQLLQNFKWVGSETGSVDLSECLKLSMEMKTPLVCRVIPRVT 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g0586 519 FunFam Cytochrome P450 78A5 47 517 - -
Glsi05g0586 519 PRINTS P450 superfamily signature 323 340 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi05g0586 519 PRINTS P450 superfamily signature 376 387 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi05g0586 519 PRINTS P450 superfamily signature 463 474 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi05g0586 519 PRINTS P450 superfamily signature 454 463 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi05g0586 519 PANTHER CYTOCHROME P450 78A7-RELATED 18 517 - -
Glsi05g0586 519 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 456 465 IPR017972 GO:0005506|GO:0016705
Glsi05g0586 519 Pfam Cytochrome P450 56 504 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi05g0586 519 CDD CYP78 87 510 - -
Glsi05g0586 519 Gene3D Cytochrome P450 47 516 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi05g0586 519 PRINTS E-class P450 group I signature 453 463 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi05g0586 519 PRINTS E-class P450 group I signature 332 358 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi05g0586 519 PRINTS E-class P450 group I signature 463 486 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi05g0586 519 PRINTS E-class P450 group I signature 200 218 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi05g0586 519 PRINTS E-class P450 group I signature 312 329 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi05g0586 519 PRINTS E-class P450 group I signature 375 393 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi05g0586 519 PRINTS E-class P450 group I signature 417 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi05g0586 519 SUPERFAMILY Cytochrome P450 55 517 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g0586 Glsi-ChrGlsi05 56392064 56394325 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g0586 5 517 Cytochrome P450 AT1G13710 65.251 0.0 675