Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g0585 ATGGATCAGAGCAGCCACTCTATCCGGACCTGGAAAGCCCGACCGAAATCCGAGCTGTATTCCACCGTCGTGGTCCACGACGACGATGACAACGACGACGGTGGCTACGGTAAGCGAGACAAAAGCGGGCGCCGACGGAATGCCAGAAGCGCGGAACCCGAGGACGATCCATATGCAACAATGGTTTACAAAGACAATGGCCATGAAGAAGATGAAGATGACGACTCCTCCCTCCCTCCCCTTCTCAAGCGCCTACCCAAAGACTTCGGTGGCGGAGCCTCAATGGACTACGACCAAGATCCTGACGAAGATGCCGGCGATTTTGGCACCATGATCGTCAAGACCGATCGAAGTCGGCAACGGAACAGGCCATCTTCGTCGTTTTCGTCGCCCGTGGATTTGACCTGGAAGGCTCGGAAATCTACTTTGACGCAGGCGAGTCCACTGAAGAGACTGGATAGTGGGGAGGATGAAGATGATGATGATGGTGATGATGGGTTTTCAACCTTTGTCGTACGTTCAAAGAGAGAGTCGGTCAGCGGAACCGTGGTGGATAGGACAAGTGGTGGGGTTGGTGGTGGCGGAACTATTACTGGGTCGACAATGGAAAGAGCGGTGGCGAGTATGCAGGCAGTGAGCGAGCCAGGATTTGGGAAACAGAGGAGAGGAAGTGGGTCCTTGCAGAACGAGGAGGGTAGGCAGTCATTAATGACGAAGGTTTCGTCGAGTTCAATTCCGGAAAGTGTTACCAGAGAGGATCCTACAACCAAGTACGAATTGCTCAATGAGCTTGGGAAGGGATCTTACGGATCTGTTTACAAAGCTAGGGATTTAAAAACCTCCGAGCTGGTTGCTATTAAAGTCATATCACTTTGTGAAGGGGAGGAGGGATATGAGGAAATCCGTGGTGAAATTGAAATGTTACAGCAATGTAATCATCCAAATGTTGTCCGCTATCTTGGAAGCTATCAAGGAGAAGAATATCTTTGGATAGTTATGGAATACTGTGGTGGTGGTAGTGTTGCTGACCTGATGAATGTGACTGAGGAGCCACTGGATGAGGGTCAGATAGCATATATCTGTAGAGAAGCACTGAAGGGACTTGAATACTTACACTCGATTTTCAAAGTCCATAGAGACATTAAAGGTGGGAATATATTGTTAACAGAACAAGGAGATGTCAAGCTAGGGGATTTTGGTGTTGCTGCACAGCTTACCAGGACCATGTCAAAGCGCAACACGTTCATTGGAACACCTCACTGGATGGCTCCAGAAGTTATTCAAGAAAGTCGCTATGATGGAAAGGTAGACGTATGGGCTCTTGGTGTTTCTGCAATTGAAATGGCAGAGGGCCTTCCTCCAAGATCAGCAGTCCATCCAATGAGGGTTTTGTTCATGATATCTATTGAACCAGCACCAATGCTTGAGGATAAAGAAAAATGGTCTCTATATTTTCATGATTTTGTTGCCAAGTGCCTTACCAAAGAACCTCGTCTACGCCCTACCGCATCTGAGATGTTGAAGCACAAATTCTTTGACAAATGGAAAACTGGATCGGCTGCAATGTTTACAAAAATTGAAAAGGCAAGGCAAATAAGGAAGTCGATGGCTTTGCAAGCACAAACTCTTCCTCCACCTGTATTAGAAGATCAGCCAAATGAAGCTCCAAAGCTGAATGATGACTATGGAGATACTGTTCCATCAAGACCTCATGACATTGGGATTCAAGGGGCAGGCGATCTCTCTTCAGATGGAACTCTGAGGAAGCTGCATAGGTTGGAAAGTGTGGACTTGAGTGAAGGTAACTTTGGCACTGTAATAATCCATGGAGATGAGGTTGATAAGACAGTAGTTAGGTCACAGGGTGCAGATTATGTAGATTCCTCTGCCTCCTTCATTAGTGGAACAGGAGGCAGACTGGCTGATTCTGGGGTTGAGAGTCCAAAAGTTGCTGTCTCAAATAATGCCACTGTTGGAGGATCTGGTCCTCATACTCATACCATACAAGCAGCATTCCCTCCTGTTAGAAACTCAACCGAGCCAAACCCCAAAATTAAAGTTGATTCTAGAGGACAAGATGGAGTTGGCAGCGATATATGCAATAGCACATTGAAGAGTGAAACAGTCAGCCGCAAAGCATTTGCTTTGCAAGATAAGCTTTGGTCCATTTATGCAGCCGGTAATACAGTACCAATTCCATTCTTACGGGCAACAGATATATCACCAATTGCTCTCCTATCAGACAATGTACTTGGTGGCATGCAACAGGATACTAGTGGAACTGCAACCGTAGAAGCATTGCAAGAACTTTTTAGTGGTGATGGACAGTCCAAAAAGGGACGTAGAGGGCAAATTGAGATGCCCCTTCCTCCAAGCATTTACCAAAGACTGACATCAAGTTCTACTCTGTTGAATTTGGCACAGGCTTTAGCTTACCACAAGACGTGTTACGAAGATATGCCACTGCAGGAACTGCAAGCAACCCAAGAGCAGCAGACTATTCAAAATCTTTGTGATACACTTCGTACTATTCTTCGCTTGTAG 2544 0.4654 MDQSSHSIRTWKARPKSELYSTVVVHDDDDNDDGGYGKRDKSGRRRNARSAEPEDDPYATMVYKDNGHEEDEDDDSSLPPLLKRLPKDFGGGASMDYDQDPDEDAGDFGTMIVKTDRSRQRNRPSSSFSSPVDLTWKARKSTLTQASPLKRLDSGEDEDDDDGDDGFSTFVVRSKRESVSGTVVDRTSGGVGGGGTITGSTMERAVASMQAVSEPGFGKQRRGSGSLQNEEGRQSLMTKVSSSSIPESVTREDPTTKYELLNELGKGSYGSVYKARDLKTSELVAIKVISLCEGEEGYEEIRGEIEMLQQCNHPNVVRYLGSYQGEEYLWIVMEYCGGGSVADLMNVTEEPLDEGQIAYICREALKGLEYLHSIFKVHRDIKGGNILLTEQGDVKLGDFGVAAQLTRTMSKRNTFIGTPHWMAPEVIQESRYDGKVDVWALGVSAIEMAEGLPPRSAVHPMRVLFMISIEPAPMLEDKEKWSLYFHDFVAKCLTKEPRLRPTASEMLKHKFFDKWKTGSAAMFTKIEKARQIRKSMALQAQTLPPPVLEDQPNEAPKLNDDYGDTVPSRPHDIGIQGAGDLSSDGTLRKLHRLESVDLSEGNFGTVIIHGDEVDKTVVRSQGADYVDSSASFISGTGGRLADSGVESPKVAVSNNATVGGSGPHTHTIQAAFPPVRNSTEPNPKIKVDSRGQDGVGSDICNSTLKSETVSRKAFALQDKLWSIYAAGNTVPIPFLRATDISPIALLSDNVLGGMQQDTSGTATVEALQELFSGDGQSKKGRRGQIEMPLPPSIYQRLTSSSTLLNLAQALAYHKTCYEDMPLQELQATQEQQTIQNLCDTLRTILRL 847
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g0585 847 MobiDBLite consensus disorder prediction 212 254 - -
Glsi05g0585 847 MobiDBLite consensus disorder prediction 21 67 - -
Glsi05g0585 847 MobiDBLite consensus disorder prediction 122 149 - -
Glsi05g0585 847 MobiDBLite consensus disorder prediction 222 251 - -
Glsi05g0585 847 MobiDBLite consensus disorder prediction 107 121 - -
Glsi05g0585 847 CDD STKc_MAP4K3_like 257 512 - -
Glsi05g0585 847 FunFam serine/threonine-protein kinase dst1 isoform X1 255 544 - -
Glsi05g0585 847 MobiDBLite consensus disorder prediction 1 199 - -
Glsi05g0585 847 Pfam Protein kinase domain 258 512 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi05g0585 847 ProSiteProfiles Protein kinase domain profile. 258 512 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi05g0585 847 FunFam Aurora kinase A 250 339 - -
Glsi05g0585 847 SUPERFAMILY Protein kinase-like (PK-like) 255 513 IPR011009 -
Glsi05g0585 847 PANTHER SERINE/THREONINE-PROTEIN KINASE TAO 241 549 - -
Glsi05g0585 847 Gene3D Transferase(Phosphotransferase) domain 1 254 543 - -
Glsi05g0585 847 MobiDBLite consensus disorder prediction 655 693 - -
Glsi05g0585 847 ProSitePatterns Protein kinases ATP-binding region signature. 264 287 IPR017441 GO:0005524
Glsi05g0585 847 SMART serkin_6 258 512 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g0585 Glsi-ChrGlsi05 56367164 56382357 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g0585 1 847 MAP Kinase Kinase Kinase Kinase AT1G69220 61.476 0.0 908
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Pl Glsi05g0585 Pkinase 8.8e-69 CL0016