Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g0578 ATGAGCATTTTTCCAGAAGCTGCAAACACAAAACCACCTTTTACTCTATGGAGTTTACAGAATAAAACCTTAACAGGAAAAACAGCAGCAGCAGCAGAAGGAGGAATACTGAAAGAATCACCAAAGGCACGCCCATTGGAGAGAACAGAAGTGTTAGGATGTGAAGGGTTAAAAGGGGAGGAAACTCCCAGAAGAATTCGAGTATTCAACGCGGTGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGGAAGCGAAGGGTTGGTAGGTACTACCAGATTATCTGCCTTCCCATCCAAAGTCTCAATCTCAGAAGCGTTGGAGGACTCAGACCCACTAACATGCCCACCATTTCAAAGCTCTATACAATGCAAGAAGCCTCCCAGCATAACTCCAAAGATGATTGCTGGGTCGTCATCGACGGCAAGGTATATGATTTGACGTCATATTTGGATGATCATCCTGGTGGAGATGATGTAGTTGTTGCTGCAACTGGGAAAGACGCAACAGATGAGTTTGAAGATGCTGGTCATAGCCAAAGTGCAAGAGACCTTATGGAAAAGTTTTTCGTTGGCGAGCTTGACACATCAACTCCAGATTCCTCCAAGAAGCTAGTGAAAGATTATTCTCAAGGTTTCGTGCAGTTGACAAAACAATATTGGGCTGTTCCTGTAGCCGTTGTTGGTATCTCAGTGGTAGTTGGCTTTTTATACTTGCGCAAGAAGTAA 723 0.444 MSIFPEAANTKPPFTLWSLQNKTLTGKTAAAAEGGILKESPKARPLERTEVLGCEGLKGEETPRRIRVFNAVRERERERERGKRRVGRYYQIICLPIQSLNLRSVGGLRPTNMPTISKLYTMQEASQHNSKDDCWVVIDGKVYDLTSYLDDHPGGDDVVVAATGKDATDEFEDAGHSQSARDLMEKFFVGELDTSTPDSSKKLVKDYSQGFVQLTKQYWAVPVAVVGISVVVGFLYLRKK 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g0578 240 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 117 193 IPR001199 -
Glsi05g0578 240 PANTHER CYTOCHROME B5 113 236 - -
Glsi05g0578 240 FunFam Cytochrome b5 type B 115 197 - -
Glsi05g0578 240 Pfam Cytochrome b5-like Heme/Steroid binding domain 121 192 IPR001199 -
Glsi05g0578 240 PRINTS Cytochrome B5 signature 167 174 IPR001199 -
Glsi05g0578 240 PRINTS Cytochrome B5 signature 180 192 IPR001199 -
Glsi05g0578 240 PRINTS Cytochrome B5 signature 152 166 IPR001199 -
Glsi05g0578 240 PRINTS Cytochrome B5 signature 142 152 IPR001199 -
Glsi05g0578 240 Gene3D - 112 198 IPR036400 -
Glsi05g0578 240 SMART Cyt_b5_2 120 193 IPR001199 -
Glsi05g0578 240 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 148 155 IPR018506 GO:0020037
Glsi05g0578 240 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 114 201 IPR036400 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g0578 Glsi-ChrGlsi05 56226231 56230397 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g0578 113 239 NADPH P450 reductases AT1G26340 61.940 2.60e-55 172