Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g0572 ATGCCACACCCACCTTCGTCGCTGGACCAATGGGACATTGGCTTGATTATTGCCATGCATCACATAATGACCCTTAATGGACTACGTGTAGAGGCAAGACTTGAATGGGAGTGTGTGCTCAGGTTGAAGGAAGGACGGCAAAGGAATCTCTTGGATGAAACTCATCTGCTACAAGCTGCTGTCTCTTTCACATTTCCCATTCAAGTCCTGCACCCACAAAAGAGGGATTCCATGCCAGCTCCTCTTCTCTCCTTTCCCTTCTTCTGCTTTCTTCCTCCTGTATTGGATATGAACCTCGAAGAGAAAGTCACCATGGTCTTGGCTCAACCTTCTGAGCACTTCTGCTATGCCCGCTGCAACTTCTGCAACACTGTGCTTGCGGTTGGAATCCCATGCAAGAGACAGCTAGACACTGTGACAGTGAAGTGTGGACACTGCAGCAACCTCTCCATTCTGAGCACCAGACCTCCTCCATCTCACAATGAAACAATTGACCACACACCCACTCTTCAGGTTCTTCATCATCTGCAGGGGTATTACAGTGATTTCAAGAAGGGCCAAGCATCATCTTCATCGTCCTCGCCATCATTAACTACATCCAGTGATCCAGTGTCCCCCAAAGCAGCACCTTTTGTTGTAAAACCACCTGAGAAGAGACACCGTCTTCCTTCGGCTTACAATCGTTTCATGAAGTAA 696 0.4813 MPHPPSSLDQWDIGLIIAMHHIMTLNGLRVEARLEWECVLRLKEGRQRNLLDETHLLQAAVSFTFPIQVLHPQKRDSMPAPLLSFPFFCFLPPVLDMNLEEKVTMVLAQPSEHFCYARCNFCNTVLAVGIPCKRQLDTVTVKCGHCSNLSILSTRPPPSHNETIDHTPTLQVLHHLQGYYSDFKKGQASSSSSSPSLTTSSDPVSPKAAPFVVKPPEKRHRLPSAYNRFMK 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g0572 231 PANTHER PROTEIN YABBY 6-RELATED 109 231 IPR006780 GO:0007275
Glsi05g0572 231 MobiDBLite consensus disorder prediction 185 205 - -
Glsi05g0572 231 MobiDBLite consensus disorder prediction 185 231 - -
Glsi05g0572 231 Pfam YABBY protein 110 231 IPR006780 GO:0007275
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g0572 Glsi-ChrGlsi05 56185075 56191365 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g0572 97 231 C2C2-YABBY Transcription Factor Family AT1G69180 56.522 8.29e-35 120
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Glsi05g0572 YABBY 1.3e-31 CL0114