Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g0566 ATGATATGTTGTATGGATTACTATGGTTTAAAGAGAAGCTCTGTTGTCGCCGGTCCTGGCTCTACCACCGCCGCTCACCCAAAGGGGTTTCCATCAACAGCGCCGCTCCGAGCTAGGAAGCAAGAAGGGATTGACTTCCCAAGGCAGTTGACAGTGCATTGCGATTCTGCCAGAAACCTCTTCTCAACAGTAGAGAAAACCCAAGAGAAATGGGCAGCTGAACATTGCTCCACTTCTTCCCGAGCTCCTGAGCTATGGGATTGCCCAAGCCATGCTGATATAGATGAGAGGACTGACATTTGGTCACTAGGATGCACACTGTATGCGATAATGTACGGGCTATCTCCATTTGAATATGCACTTGGAGAATCTGGAGGAAGCCTGCAATTGGCCATTGTAAATGCTCAGGTCAAATGGCCAGCTAGACCTAAGCTTCCATTTCCAGAAGCTCTTCATCAGTTTGTGACATGGATGCTTCACTTATCCAGATGCTCTTCATTATCAGTCTGCCGTTGGTTTTATTAA 525 0.4724 MICCMDYYGLKRSSVVAGPGSTTAAHPKGFPSTAPLRARKQEGIDFPRQLTVHCDSARNLFSTVEKTQEKWAAEHCSTSSRAPELWDCPSHADIDERTDIWSLGCTLYAIMYGLSPFEYALGESGGSLQLAIVNAQVKWPARPKLPFPEALHQFVTWMLHLSRCSSLSVCRWFY 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g0566 174 Gene3D Transferase(Phosphotransferase) domain 1 51 171 - -
Glsi05g0566 174 Pfam Protein kinase domain 71 163 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi05g0566 174 PANTHER SERINE/THREONINE-PROTEIN KINASE 16 67 162 - -
Glsi05g0566 174 SUPERFAMILY Protein kinase-like (PK-like) 81 162 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g0566 Glsi-ChrGlsi05 56069926 56074089 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NAK Glsi05g0566 Pkinase 4.9e-08 CL0016