Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g0518 ATGATGCCCAGTGAGATCAGAGGAGTCCACTGCCTAACACCAGAAAACCAAATCCTAATCTCCCCAAACTCTGGCTTCCTGCAGAATGACATCCCAAACTTTCATCTAAATACCCTCTTGAGAAATCTCCCAAACTACTACTTCTCTTCTGGAAGCCATGAATTTGTTTCTCCTCCTTCATGCCTCAGCAACTCAACGTCTGATGAAGCTGACGAACACCAGCTCAACATCATCGACGAAAGGAAGCAGAAGCGAATGATTTCGAACAGAGAATCCGCCCGGAGGTCGAGGATGAGGAAGCAGAGGCACTTGGATGAACTCTGGTCGCAGGTGGTTAGGCTCAGAACCGAGAACCACAAACTGATTGATAAACTGAACCATGTGTCTGAATCCCATGATAGGGCTCTTCAAGAGAATGCTCGGCTCAAGGAAGAAGCTTCTGATCTTCGCCAAGTGGTAACAGAACTACAAATTGGGAATGCTTTTGCCAACTCCATGAGAGATTTTGACGAGTTTCCCTACAAAACTAGCCCAACTCTGAGCTGA 546 0.467 MMPSEIRGVHCLTPENQILISPNSGFLQNDIPNFHLNTLLRNLPNYYFSSGSHEFVSPPSCLSNSTSDEADEHQLNIIDERKQKRMISNRESARRSRMRKQRHLDELWSQVVRLRTENHKLIDKLNHVSESHDRALQENARLKEEASDLRQVVTELQIGNAFANSMRDFDEFPYKTSPTLS 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g0518 181 CDD bZIP_plant_GBF1 82 133 IPR045314 GO:0003700|GO:0006355
Glsi05g0518 181 FunFam BZIP transcription factor 79 130 - -
Glsi05g0518 181 Pfam bZIP transcription factor 81 139 IPR004827 GO:0003700|GO:0006355
Glsi05g0518 181 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 79 142 IPR004827 GO:0003700|GO:0006355
Glsi05g0518 181 SMART brlzneu 77 141 IPR004827 GO:0003700|GO:0006355
Glsi05g0518 181 SUPERFAMILY Leucine zipper domain 81 130 IPR046347 GO:0003700|GO:0006355
Glsi05g0518 181 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 84 99 IPR004827 GO:0003700|GO:0006355
Glsi05g0518 181 PANTHER BASIC LEUCINE ZIPPER 43-RELATED 9 168 IPR044521 -
Glsi05g0518 181 Coils Coil 125 152 - -
Glsi05g0518 181 Gene3D - 79 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g0518 Glsi-ChrGlsi05 55283878 55284423 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g0518 23 163 bZIP Transcription Factor Family AT3G30530 58.389 1.73e-48 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Glsi05g0518 bZIP_1 1.5e-12 CL0018