Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g0509 ATGGCAATGGCGATCGGATCTTCCTTTCATTCAAACTCCTCCTCATATCTGAAGCAAATTGTATATCTCACCTTCGGCTTTCTTGTTCTCACCAGATTGTATGCTACTAGCAGTGACCCTCCTTTGACACTGGATTACTATGCATCGTCTTGCCCCACTTTGCTCGAAGTTGTCAGGAAGGAAATGGAATGTGCAGTGCTTGAGGATCCCCGGAATGCCGCCATGATGGTTCGGCTTCACTTCCATGACTGCTTTGTCCAGGGATGCGATGGATCAGTTTTGCTCGACGATACAGTCACACTTAAAGGAGAGAAGAAAGCAGCTCCCAACATCCACTCTTTGAAAGGCTTCAGACTCATTGATAGAATCAAGAACATGGTTGAATCAGATTGCCCCGGAATTGTCTCTTGCGCAGATATTCTCACTATTGCAGCTAGAGATGCTGTGATTCTGGTTGGTGGACCTTACTGGGATGTTCCTTTGGGAAGGAAGGATTCTGTCAATGCAAATTTTGAACTTGCCAAAACCAATCTTCCCACTGCAGATGAGAATCTTCTCTCCATCATTACCAAGTTTCTTTACCAAGGCCTATCAGTCACAGATATGGTAGCTCTTTCAGGAGCTCACACCATCGGCATGGCACGCTGTCAGAATTTCCGGGGAAGGATTTACGGAGACTTCGAAGGAACTTCGGAGAAAAATCCTGTCTCCGAGAGTTACCTGAGCAACCTAAGATCAATTTGCCCACCTATTATTAAGAGAGGAGACAATAACGTAACAGCAATGGACCATGTCACCCCTAATCTGTTTGACAATTCTTTCTACCACTTGCTATTGAAAGGGGAGGGACTGCTCAACTCGGACCAAGAAATGTACTCAAGTGCTTTTGGGATTGAAACAAGAGAGCTTGTTAAGAAATATGCAGCAGATACTGTAGCATTTTTCCAGCAATTCTCGGATTCAATGGTGAAGATGGGGAATATCACAAATCCAGAAAGCTTTGTCCATGGAGAAGTTAGGAAGACTTGCAGATTTGTTAACACATGA 1047 0.4441 MAMAIGSSFHSNSSSYLKQIVYLTFGFLVLTRLYATSSDPPLTLDYYASSCPTLLEVVRKEMECAVLEDPRNAAMMVRLHFHDCFVQGCDGSVLLDDTVTLKGEKKAAPNIHSLKGFRLIDRIKNMVESDCPGIVSCADILTIAARDAVILVGGPYWDVPLGRKDSVNANFELAKTNLPTADENLLSIITKFLYQGLSVTDMVALSGAHTIGMARCQNFRGRIYGDFEGTSEKNPVSESYLSNLRSICPPIIKRGDNNVTAMDHVTPNLFDNSFYHLLLKGEGLLNSDQEMYSSAFGIETRELVKKYAADTVAFFQQFSDSMVKMGNITNPESFVHGEVRKTCRFVNT 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g0509 348 SUPERFAMILY Heme-dependent peroxidases 42 347 IPR010255 GO:0004601|GO:0006979|GO:0020037
Glsi05g0509 348 PRINTS Haem peroxidase superfamily signature 201 216 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi05g0509 348 PRINTS Haem peroxidase superfamily signature 135 152 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi05g0509 348 PRINTS Haem peroxidase superfamily signature 73 87 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi05g0509 348 PRINTS Haem peroxidase superfamily signature 153 165 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi05g0509 348 PRINTS Haem peroxidase superfamily signature 263 278 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi05g0509 348 CDD secretory_peroxidase 42 346 IPR033905 GO:0004601|GO:0042744
Glsi05g0509 348 PANTHER PEROXIDASE 72-RELATED 42 346 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi05g0509 348 FunFam Peroxidase 179 325 - -
Glsi05g0509 348 FunFam Peroxidase 45 188 - -
Glsi05g0509 348 ProSitePatterns Peroxidases proximal heme-ligand signature. 201 211 IPR019793 -
Glsi05g0509 348 Gene3D Peroxidase, domain 2 179 325 - -
Glsi05g0509 348 PRINTS Plant peroxidase signature 320 333 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi05g0509 348 PRINTS Plant peroxidase signature 115 128 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi05g0509 348 PRINTS Plant peroxidase signature 200 212 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi05g0509 348 PRINTS Plant peroxidase signature 134 144 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi05g0509 348 PRINTS Plant peroxidase signature 261 276 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi05g0509 348 PRINTS Plant peroxidase signature 277 294 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi05g0509 348 PRINTS Plant peroxidase signature 51 70 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi05g0509 348 PRINTS Plant peroxidase signature 75 95 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi05g0509 348 PRINTS Plant peroxidase signature 153 168 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi05g0509 348 ProSiteProfiles Plant heme peroxidase family profile. 41 347 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi05g0509 348 ProSitePatterns Peroxidases active site signature. 73 84 IPR019794 GO:0004601
Glsi05g0509 348 Pfam Peroxidase 58 310 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi05g0509 348 Gene3D - 45 347 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g0509 Glsi-ChrGlsi05 55214886 55216977 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g0509 39 348 Peroxidase AT1G68850 72.903 3.85e-177 493