Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g0508 ATGGCTCAAGATACTTCCAGTGCTGATTCACATAGTAGGCGTCATGGTCTCTTAAAAGATCAGGTTCGTTTGGTTAAAAGGAAAGACTCTGATCGCTATGAGATTGCTCCAATCCCTGATCTTCTATCATTTGAGAAGGGTTTCTTTATAGTAATACGTGCTTGCCAATTGTTGGCCCAAAACAATGATGGAATAATATTGGTGGGTTTGGCGGGTCCTTCTGGGGCAGGGAAGACTGTATTTACAGAAAAAATACTCAACTTTATGCCTGGCATTGCACTCATTTCAATGGACAATTACAATGATTCCAGTCGAATTGTTGATGGAAACTTTGATGATCCACGCTTGACAGACTATGACACATTGCTCCAGAATGTCCATGATTTGAAGGCAGGAAAGTCAGTCCAGGTTCCTATCTATGATTTCAAGTCCAGCTCACGTACAGGATACAGAACTGTCGAAGTCCCTAGCTCCCGCATCATGATTATAGAGGGCATCTATGCTTTGAGTGAGAGGTTGAGACCTCTACTGGATCTTCGAGTATCTGTCACAGGTGGAGTTCACTTGGACCTTGTAAAACGAGTTATTCGTGACATACAACGTGCTGGTCAAGAACCTGAAGAAATTATTCATCAAATATCTGAGACGGTATACCCAATGTACAAGGCCTTTATTGAACCTGATCTCCAGACAGCACATATCAAAATTGTGAACAAGTTCAATCCATTTACTGGATTTCAGAGTCCTACTTACATTTTAAAGTCGGGAAGGAATGTAACAGTTGATCAAGTTAAAGCTGTTCTCTCTCAAGATTACAAGGAAACAACAGAGCAGACTTATGACATATATCTTCTACCTCCTGGTGAAGATCCAGAGACTTGCCAATCATATTTGCGGATGCGGAATAAAGATGGGAAATACAGTCTTATGTTTGAGGAATGGGTGACAGACAATCCATTTGTCATATCACCAAGAATTACTTTTGAGGTTAGTGTGCGTCTTCTTGGTGGACTAATGGCCTTGGGGTACACGATAGCTACCATCCTTAAAAGAAACAGCCATGTATTCTCTGATGATAGGGTTTGTGTGAAACTTGACTGGCTTGAGCAACTTAGTCGACATTATGTTCAGGTGCAAGGAAAAGATCGCTTAGTTGTAAAATACGTAGCAGAGCAGCTGGGTCTGGAAGGTTCTTACATTCCCCGTACTTACATTGAGCAAATTCAACTTGAAAAGCTTGTAAATGAGGTTATGGCCCTGCCAGATGATTTAAGGACAAAGCTTAGCCTAGACGAGGATTTGGTGTCAAGCCCCAAAGAAGCACTTTCTAGAGCCTCTGCAGACATGGTTGCCATGAGAAATAAGCATATGAGGAGTGGTATGTCACGGTCATATACAAACCAAAGGGACAAGAATCTAGCCAAATTGACTGGATATGGTGCAAAGAATCGTGGGTTTGGTGAAAGAAATCCAGATTCGTCCACAGCACTACCAAGCCAGGGAGCCATCACTCAACTTTCAGAACAAATCTCTTCCCTTAATGATAGGATGGACGAGTTTACTAATCGTATTGAAGAGCTGAACTCCAAGTTAACCATTAAGAATAATTTTCCAAGCCAACAAAATATGGCACTCCATGCTGAAGTCTGCAATGGTTCTGCACCCACCTCTTGCTTACTTACTAGCTTGGGCAATGGCTCTGTAACTGGATCCATTATGCCAAATTCCTCATCTTCATCACAATTAGCTAAAGAGTCACCTTTAATCGAAGAGATATTGGGTATCGCACGGGGTCAGCGTCAAATCATCCACAAACTTGATAATCTCAATAATCTTCTCCGGGGAAGCGTGGGAGAGAAGTATCTCCAAACAAGAGCAAACGGCAGGAAAAGCATGGCTGCTGCTGATTCAGAATCCACGGCTATACGAGTTATGGTGACAGTGGCTATTGGTTGTTTGGGGATCTTCTTGATGAAGGGTTTGCTAAACAGAAAGTGA 1998 0.4219 MAQDTSSADSHSRRHGLLKDQVRLVKRKDSDRYEIAPIPDLLSFEKGFFIVIRACQLLAQNNDGIILVGLAGPSGAGKTVFTEKILNFMPGIALISMDNYNDSSRIVDGNFDDPRLTDYDTLLQNVHDLKAGKSVQVPIYDFKSSSRTGYRTVEVPSSRIMIIEGIYALSERLRPLLDLRVSVTGGVHLDLVKRVIRDIQRAGQEPEEIIHQISETVYPMYKAFIEPDLQTAHIKIVNKFNPFTGFQSPTYILKSGRNVTVDQVKAVLSQDYKETTEQTYDIYLLPPGEDPETCQSYLRMRNKDGKYSLMFEEWVTDNPFVISPRITFEVSVRLLGGLMALGYTIATILKRNSHVFSDDRVCVKLDWLEQLSRHYVQVQGKDRLVVKYVAEQLGLEGSYIPRTYIEQIQLEKLVNEVMALPDDLRTKLSLDEDLVSSPKEALSRASADMVAMRNKHMRSGMSRSYTNQRDKNLAKLTGYGAKNRGFGERNPDSSTALPSQGAITQLSEQISSLNDRMDEFTNRIEELNSKLTIKNNFPSQQNMALHAEVCNGSAPTSCLLTSLGNGSVTGSIMPNSSSSSQLAKESPLIEEILGIARGQRQIIHKLDNLNNLLRGSVGEKYLQTRANGRKSMAAADSESTAIRVMVTVAIGCLGIFLMKGLLNRK 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g0508 665 MobiDBLite consensus disorder prediction 480 499 - -
Glsi05g0508 665 Gene3D - 66 245 IPR027417 -
Glsi05g0508 665 SUPERFAMILY CYTH-like phosphatases 262 407 IPR033469 -
Glsi05g0508 665 CDD UMPK_like 67 239 - -
Glsi05g0508 665 Pfam CYTH domain 269 404 IPR023577 -
Glsi05g0508 665 Gene3D - 257 413 - -
Glsi05g0508 665 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 34 236 IPR027417 -
Glsi05g0508 665 PRINTS Uridine kinase signature 65 82 - -
Glsi05g0508 665 PRINTS Uridine kinase signature 188 198 - -
Glsi05g0508 665 PRINTS Uridine kinase signature 224 237 - -
Glsi05g0508 665 PRINTS Uridine kinase signature 132 147 - -
Glsi05g0508 665 ProSiteProfiles CYTH domain profile. 248 410 IPR023577 -
Glsi05g0508 665 Coils Coil 503 530 - -
Glsi05g0508 665 PANTHER URIDINE KINASE 30 423 - -
Glsi05g0508 665 Pfam Phosphoribulokinase / Uridine kinase family 68 236 IPR006083 GO:0005524|GO:0016301
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g0508 Glsi-ChrGlsi05 55190260 55204663 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g0508 66 236 PRT Gene Family AT5G40870 27.778 6.38e-18 85.5