Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g0507 ATGGAAAGGATAGGGGATGCTGCTGCTTTCTACTGTTGTTTAGCTGTGTTCTTCTTCTTATGGACTTCAGCAGCTGGTTTGCTTTCTCCTAAAGGTGTCAACTATGAAGTGCAAGCTCTTATGGGCATTAAAGATTCTTTGAAGGATCCTCATGCTGCTCTTTATAACTGGGATGGTAATGCTGTGGATCCATGTAGCTGGGCTATGGTCACTTGTTCTCCTGACCATCTTGTGATTGCCATAGGATTTCCAAGCCAAAACTTATCTGGCACTTTGTCCCCAAGCATTGGCAACTTAACAAACCTTCAAACTGTGCTGTTGCAAGATAATAATATATCAGGACCAATCCCCTCTGAGTTTGGGAGGCTCCAAAAGCTTGAAACTCTTGATCTTTCTGATAATTTCTTTACTGGTCATCTTCCAGATAGTCTATCCCACATGAAAAGTCTTCACTATCTGAGGTTGAACAATAATAGTCTTACTGGAGCTATTCCTTCATCTTTAGCTGACATGAGCCAGCTTGCTTTTTTGGATATCTCTTATAATAACTTGAGTGCACCTGTTCCCAGAATAAATGCAAAAACATTCAATATTGTAGGCAATCCCCAGATATGTGCCACTGGAACAGAGCAAAACTGCTTCAGAACAACACAAATTTCTTCTAACTTGAATACTTCTCAAGATTCGCCATCCACTGGTAGAACAAAGAACCACAAAATGCCCTTGGCACTTGCTTCAAGCGTAAGCTGCATCTGCTTACTGATTCTGGGGTTCGGTTTCCTCCTCTGGTGGAGACACAGATATAACAAACAAGTTTTCTTCGATGTTAATGAGCAATTCCGAGAAGAGGTTTGCCTTGGAAACCTCAAGAAGTTCCATTTCAGAGAGCTTCAACTTGCTACAAATAACTTCAGCAGCAAAAACTTGATTGGCAAAGGAGGTTTTGGAAATGTGTACAAAGGGTATCTCCCAGATGGCACAGTCGTAGCAGTAAAAAGGCTTAAAGATGGCAATGCCATTGGAGGTGAGATTCAATTTCAGACAGAAGTTGAGATGATCAGCTTAGCTGTGCATAGGAACCTCCTCCGCCTCTATGGATTTTGTATGGCAGCTTCGGAGAGGCTCTTGGTTTATCCCTACATGTCTAATGGTAGTGTTGCTTCTCGCCTTAAAGCCAAGCCTGCTCTAGACTGGAGTACAAGGAAGAGGATAGCCTTGGGAGCAGCAAGGGGCTTGCTATATCTGCATGAGCAGTGTGACCCCAAGATTATTCACAGGGATGTGAAGGCTGCAAATATCTTACTTGATGATGACTGTGAGGCAGTGGTGGGGGATTTTGGGTTGGCAAAGTTGTTGGACCACAGAGATTCACATGTGACAACAGCTGTGAGAGGCACAGTAGGGCACATAGCCCCAGAATACCTCTCCACAGGGCAATCCTCTGAGAAAACAGATGTGTTTGGGTTTGGAATCCTTCTGCTTGAACTCATTTCTGGCCAAAGAGCACTTGAGTTTGGGAAAGTAGCAAAACAGAAAGGAGCTATGCTTGACTGGGTAAAGAAATTTCATCAAGAGAAGAAACTTGACTTGTTAGTTGACAAGGACTTGAGAAACAACTATGACAGAATTGAGCTTGAAGAAATAGTTCAAGTAGCTCTTTTATGCACTCAGTACATTCCCAGTCATAGACCCAAGATGTCTGAAGTGGTTCGGATGCTTGAAGGCGATGGGCTCGCAGAGAAATGGGAAGCTTCGCAGAGAGCTGAATCTACAAGCAGAGCAAATGAACTCTCTTCTTCAGCGCGATACTCGGATCTTACTGATGACTCTTCATTGCTTGCACAGGCAATGGAGCTTTCTGGACCAAGGTGA 1872 0.4354 MERIGDAAAFYCCLAVFFFLWTSAAGLLSPKGVNYEVQALMGIKDSLKDPHAALYNWDGNAVDPCSWAMVTCSPDHLVIAIGFPSQNLSGTLSPSIGNLTNLQTVLLQDNNISGPIPSEFGRLQKLETLDLSDNFFTGHLPDSLSHMKSLHYLRLNNNSLTGAIPSSLADMSQLAFLDISYNNLSAPVPRINAKTFNIVGNPQICATGTEQNCFRTTQISSNLNTSQDSPSTGRTKNHKMPLALASSVSCICLLILGFGFLLWWRHRYNKQVFFDVNEQFREEVCLGNLKKFHFRELQLATNNFSSKNLIGKGGFGNVYKGYLPDGTVVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGFCMAASERLLVYPYMSNGSVASRLKAKPALDWSTRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDDDCEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGQRALEFGKVAKQKGAMLDWVKKFHQEKKLDLLVDKDLRNNYDRIELEEIVQVALLCTQYIPSHRPKMSEVVRMLEGDGLAEKWEASQRAESTSRANELSSSARYSDLTDDSSLLAQAMELSGPR 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g0507 623 MobiDBLite consensus disorder prediction 588 604 - -
Glsi05g0507 623 Gene3D Transferase(Phosphotransferase) domain 1 381 593 - -
Glsi05g0507 623 FunFam Somatic embryogenesis receptor kinase 1 273 380 - -
Glsi05g0507 623 Gene3D Ribonuclease Inhibitor 33 215 IPR032675 -
Glsi05g0507 623 Gene3D Phosphorylase Kinase; domain 1 273 380 - -
Glsi05g0507 623 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 16 584 - -
Glsi05g0507 623 Pfam Protein kinase domain 305 571 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi05g0507 623 SUPERFAMILY L domain-like 35 306 - -
Glsi05g0507 623 Pfam Leucine rich repeat 100 160 IPR001611 GO:0005515
Glsi05g0507 623 SUPERFAMILY Protein kinase-like (PK-like) 284 574 IPR011009 -
Glsi05g0507 623 ProSitePatterns Protein kinases ATP-binding region signature. 310 332 IPR017441 GO:0005524
Glsi05g0507 623 FunFam Somatic embryogenesis receptor-like kinase 1 381 593 - -
Glsi05g0507 623 MobiDBLite consensus disorder prediction 584 604 - -
Glsi05g0507 623 ProSitePatterns Serine/Threonine protein kinases active-site signature. 423 435 IPR008271 GO:0004672|GO:0006468
Glsi05g0507 623 ProSiteProfiles Protein kinase domain profile. 304 554 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi05g0507 623 Pfam Leucine rich repeat N-terminal domain 34 73 IPR013210 -
Glsi05g0507 623 SMART serkin_6 304 559 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi05g0507 623 FunFam Putative LRR receptor-like serine/threonine-protein kinase 33 215 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g0507 Glsi-ChrGlsi05 55167358 55172244 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g0507 9 623 Receptor kinase-like Gene Family AT5G16000 73.920 0.0 941
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Glsi05g0507 Pkinase 1.3e-43 CL0016