Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g0470 ATGCCGTATTTTATGAAAGATGACTCTCTCATTGTATCCAAGAGTTTTGAGGCAATTGAGAAACCAGAAGGGAAAAAGGACGAGGAAGAGTCAGAAATTTTGTCAGAGAAAATAGCCAGCATAGCTCATTCTTTCAAAGTGTACGGTTTTAAGGAACTAGAGAGTGCAACAGATAATTTTAGTCTGAGCTGCTGGATTAAAGGATCTGTCTATAGCGGTGTTATTAATGGTAATTTGGCTGTGACTAAAAAGATGGATGGAGATGTGTCGAAAGAGATACAAATTCTGAACAAAGTCAACCATTCCAATGTCATACGCTTTTCTGGGGTTAGCTTTAACGAGGGCAATTGGTATCTGGTTTATGAGAATGCTGCTAATGGACTCTTGAGTGACTGGATCTACTTCAACAACGTCGATGGAAAGTTTCGGACTTGGATGCGGAGATTACAGATTACATTGGATATGGCTACAGGACTTGACTATCTCCATAGTTTCACTTCTCCTCCTCATATCCACAAGCTAGTCGTGTATGCATTTGGGGTTCTGATGCTGGAAATATTGACTGGGAAAGAGGCTGCTGCTATTTATGCAGAGTATAAGACAAATCTGTCTAATGTTTTGAGTGTGATAGTTGGTGAGGAAAGTGGGTAG 651 0.4025 MPYFMKDDSLIVSKSFEAIEKPEGKKDEEESEILSEKIASIAHSFKVYGFKELESATDNFSLSCWIKGSVYSGVINGNLAVTKKMDGDVSKEIQILNKVNHSNVIRFSGVSFNEGNWYLVYENAANGLLSDWIYFNNVDGKFRTWMRRLQITLDMATGLDYLHSFTSPPHIHKLVVYAFGVLMLEILTGKEAAAIYAEYKTNLSNVLSVIVGEESG 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g0470 216 ProSiteProfiles Protein kinase domain profile. 5 216 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi05g0470 216 SUPERFAMILY Protein kinase-like (PK-like) 42 192 IPR011009 -
Glsi05g0470 216 Pfam Protein tyrosine and serine/threonine kinase 84 165 IPR001245 GO:0004672|GO:0006468
Glsi05g0470 216 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 173 206 - -
Glsi05g0470 216 Gene3D Transferase(Phosphotransferase) domain 1 67 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g0470 Glsi-ChrGlsi05 54577984 54582379 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g0470 24 173 Receptor kinase-like Gene Family AT2G23770 47.059 8.14e-37 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Glsi05g0470 PK_Tyr_Ser-Thr 1.1e-09 CL0016