Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g0464 ATGGCTGGGCCATCGTGGTTGGTTGACAAAAGTAGGATTGCCACCAAAATTAAGAGTGCTTCGGGAGCATGTGATCCTACAACTGTTATATGGAAAAGTAATCCTACAAGATCTTGTCCAAACTGTCAACATGTTATTGACAACGATGATGTAGCACAAGAGTGGCCTGGATTACCAAAAGGTGTGAAATTTGATCCATCTGATCAAGAGATAATATGGCACTTGCATGCTAAAGTTAACATGGGAAATTCAAAACCCCATCCTTTTATTGATGAATTTATCACTACTCTTGAAGTGGATGATGGGATATGTTATACTCATCCTCAATATTTACCAGGCGTTAAGCAAGATGGAAGCACCTCCCACTTCTTCCATAGAGCAATCAAGGCTTATAATACTGGCACTCGAAAGCGTCGAAAAATACATGGTCAGGATTTTGGAGATGTCCGCTGGCACAAGACTGGAAGGACAAAACCAGTAATCTTGGATGGGGTTCAAAAAGGCTGTAAAAAGATTATGGTTCTCTATATGAGCATGGCTAAAGGAGAGAAGGCTGAGAAAACAAATTGGGTTATGCATCAATATCACTTGGGAACTGAAGAGGATGAAAAGGATGGGGAGTATGTTATCTCTAAAGTATTTTACCAGCAGCAGCAAGTCAAATTGGGTGATAAAGATGACCTTGATATTCATATTCCTGAAACCATAGAAACAACAATAGTGAAAGTTGATCCAGTCACTCCCAAATCTGTCACCCCTGAACCTCCTCGTACTGACAGGCGATGCTCAGACCTTGACCTAGGACAAGAATCATGTTTTATTCCTCAGATGGATTGTGTAGGAGATGAAATTCAACCTGATTGTGAAGAGAATGTGGAAACTGATCTATCCAAGGTGGAAACTAACCCTAATGAAGAAAGGACAGATAATAATGAAAATCATGCTGAAGAAGAACCAAAATGGTGGGACAGCGAGTCACAGAATCTGTTGGATTCACAACAGCTAGTTGAAGCTCTGTCCTTGTGTGATGATCTCCTTCAGAGCCAGTCTCCCAATAGGGATGGGAAGAGTGGAGAACATAATGATCGACCCAGTCTTTCAGTTTATGCTCATCTTGGACCAGAGCATCTGAAGAAGGATCTTGAAGATTGCCAAAATCTTGTCCTTGATCCTGCCAATATAGACCTTGATACACCTCCAGAATTCCGACTAAGCCAGCTGGAATTTGGTTCGCAGGATAGCTTTATTTCCTGGGGCGGCAGCGGCAATGCAATTAACTAA 1281 0.4169 MAGPSWLVDKSRIATKIKSASGACDPTTVIWKSNPTRSCPNCQHVIDNDDVAQEWPGLPKGVKFDPSDQEIIWHLHAKVNMGNSKPHPFIDEFITTLEVDDGICYTHPQYLPGVKQDGSTSHFFHRAIKAYNTGTRKRRKIHGQDFGDVRWHKTGRTKPVILDGVQKGCKKIMVLYMSMAKGEKAEKTNWVMHQYHLGTEEDEKDGEYVISKVFYQQQQVKLGDKDDLDIHIPETIETTIVKVDPVTPKSVTPEPPRTDRRCSDLDLGQESCFIPQMDCVGDEIQPDCEENVETDLSKVETNPNEERTDNNENHAEEEPKWWDSESQNLLDSQQLVEALSLCDDLLQSQSPNRDGKSGEHNDRPSLSVYAHLGPEHLKKDLEDCQNLVLDPANIDLDTPPEFRLSQLEFGSQDSFISWGGSGNAIN 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g0464 426 MobiDBLite consensus disorder prediction 347 366 - -
Glsi05g0464 426 SUPERFAMILY NAC domain 43 216 IPR036093 GO:0003677|GO:0006355
Glsi05g0464 426 Gene3D NAC domain 67 221 IPR036093 GO:0003677|GO:0006355
Glsi05g0464 426 Pfam No apical meristem (NAM) protein 59 197 IPR003441 GO:0003677|GO:0006355
Glsi05g0464 426 ProSiteProfiles NAC domain profile. 58 216 IPR003441 GO:0003677|GO:0006355
Glsi05g0464 426 FunFam NAC domain-containing protein 8 67 220 - -
Glsi05g0464 426 MobiDBLite consensus disorder prediction 294 322 - -
Glsi05g0464 426 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 5 385 IPR044799 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g0464 Glsi-ChrGlsi05 54476706 54482794 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g0464 5 223 NAC Transcription Factor Family AT4G28500 51.556 2.89e-74 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Glsi05g0464 NAM 2.3e-21 No_clan