Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g0453 ATGGGGTTTCGCGAGTACATCGAAGCATTAGAACAAGAACGCCGTAAAATCCAGGTTTTTCCCAGAGAGCTTCCGCTTTCGTTGGAGCTTGTTACGCAAGCCATTGAAGCGTGCAAGCAACAGCTGTCTGGGACGACGACGGAGTACAATTTGCATGGCCAATCGGAGTGTTCAGAGCAGACATCAACGGAAGAAGGCCCTGTTTTGGAGGAGTTTATACCCATTAAGAAAAGGGCATCCCCAGATTGTTATGAAGAAGATGATGAAGAAGATGAGCCGCATTCGCATAAACCCAAGATTCTGAAGGAAAATAACAACACTGATAAGAAAAAATCAGATTGGCTTAGATCCGTTCAACTCTGGAACCCAGATCCCCCAATAAAAGAGGATGTTCCTAGAAAAGCGTCGGTGGTGGAAGTGAAGAGAAATGGGGGTGCTTTCCAGCCATTTCACAGAGAGGAAAGTGGTGGAAAGACTAATGATGTTTCTGTTGGTAAAGCACCTTCTTCCACACCGGTACCTGCGACAAGTTCTACAGCCGGTGCAGTCGCCGGAGGCAATGCCGGAAGCAGCAAAAGAGAGGAGAAAGAAGGGCAGGCTCAGCGGAAGCAACGGCGGTGCTGGTCGCCGGAGTTGCATAAGCGCTTTCTACAAGCCCTACAGCAACTTGGAGGTCCAGATTCTGCAACTCCCAAGCAGATCAGAGAGCTGATGAAGGTTGATGGCCTCACAAATGACGAAGTCAAGAGCCATTTACAGAAATTCCGATTGCACACCCGAAGACCGAGCCCAATGATTCACAACAATGCCAATCCACAAACAGCTCCTTTTGTCCTTGTGGGGAACATTTTTGTTCAGCCACCAGAATATGCCGCAGTAGCAACTTCAACATCAGGGGAGGTGACTACTGTTTCTGCTCCTAGTGGAATTTATGCGCCAGTAGCGGCGCATCCTCCAGCCCCAGCAGCACCATTCATGAAGAAGCCACAGTTCAAGCAATTAGAGCAGCCAGAGCATTCACATTCAGAAGAAAGGGTGAATCACAGTGAAGGAGCAGTTCATTCAAACTCCCCTGCTTCATCTTCCTCAACCCACACTACCTCAACTTCTCCTGGCTATTGA 1122 0.4866 MGFREYIEALEQERRKIQVFPRELPLSLELVTQAIEACKQQLSGTTTEYNLHGQSECSEQTSTEEGPVLEEFIPIKKRASPDCYEEDDEEDEPHSHKPKILKENNNTDKKKSDWLRSVQLWNPDPPIKEDVPRKASVVEVKRNGGAFQPFHREESGGKTNDVSVGKAPSSTPVPATSSTAGAVAGGNAGSSKREEKEGQAQRKQRRCWSPELHKRFLQALQQLGGPDSATPKQIRELMKVDGLTNDEVKSHLQKFRLHTRRPSPMIHNNANPQTAPFVLVGNIFVQPPEYAAVATSTSGEVTTVSAPSGIYAPVAAHPPAPAAPFMKKPQFKQLEQPEHSHSEERVNHSEGAVHSNSPASSSSTHTTSTSPGY 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g0453 373 MobiDBLite consensus disorder prediction 77 108 - -
Glsi05g0453 373 MobiDBLite consensus disorder prediction 321 373 - -
Glsi05g0453 373 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 4 343 IPR044787 GO:0003700|GO:0006355
Glsi05g0453 373 SUPERFAMILY Homeodomain-like 201 261 IPR009057 -
Glsi05g0453 373 FunFam Myb family transcription factor 202 260 - -
Glsi05g0453 373 Pfam Myb-like DNA-binding domain 205 254 IPR001005 -
Glsi05g0453 373 Gene3D - 202 260 - -
Glsi05g0453 373 MobiDBLite consensus disorder prediction 90 108 - -
Glsi05g0453 373 MobiDBLite consensus disorder prediction 143 208 - -
Glsi05g0453 373 MobiDBLite consensus disorder prediction 332 350 - -
Glsi05g0453 373 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 200 260 IPR017930 -
Glsi05g0453 373 MobiDBLite consensus disorder prediction 351 373 - -
Glsi05g0453 373 MobiDBLite consensus disorder prediction 162 185 - -
Glsi05g0453 373 MobiDBLite consensus disorder prediction 190 208 - -
Glsi05g0453 373 NCBIfam myb-like DNA-binding domain, SHAQKYF class 203 258 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g0453 Glsi-ChrGlsi05 54248356 54250267 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g0453 5 364 G2-like Transcription Factor Family AT1G13300 47.154 1.81e-86 263
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Glsi05g0453 Myb_DNA-binding 1.9e-06 CL0123