Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g0441 ATGGCCTCCGATGATCAGGGCTGCCGTCGCAAGCACCGGCGATCATCCTCTCCCGAAGAGGCTGAGAGATCATCGAAGCGCCACAAGCACCGCCACCATAGTCATCGGCATCATAGGCACCGCCACCACGGTAGCAAGAAACGCGAAGAAGAATTCGAACTTGATTCTGAAACTGTTGACACGGTTCCTTCTCCAACTCGTCCTCCTAATTCTGGTCCGAATACCCGCGGGCCTGATGACGATGTGGAGGAGGGGGAGATTCTCGAAGAGGAGGGTTTTGGCAGCCGAGATGGTGAGATTGGGAAAAAACAAACGGAGTCTGATGCTGAGTCTGGTGAAATTATGGGTGCGGGAGATCGAGGTAGTCGTTCTGATACGGCAAATCTGGTACCTTATACTGAAGAGACTATGTTGCATTGTGAAGATGTTGTTCCTTCTAGAAAGAGTGTAGGGATCAACGCTAAAAGTTCAAAATCTAATAATGAGGACAGTAGCAATGGTAAATTTATTAGTCCAGCAATTGATGGAGAAGAAGAGACGTGGCGTCAGAGCTACACTGATCATAATATACATGAAGGTGATGGTTCTCCTACTCGTTCAAGTGCTGAGCCTCTAGATGGAAAGTATGCTAGAGAAGATACAGGTGGCTTGGGCAATGGATATTTGCATCCTAAGCCTTCCAAAGAGGATAAATGGCAGCATGGGGAACTTGAATGTTTTAAAGGGAATGAGAAGCTAAAAGACGACTATTATAATGAAGATTTGGAGTTTAATGGAGCCAAAGTAAGCAATAGGAATTCCTCATCGGAAAGTGGTGGAGGGAAATATAGGACCTTGGGAAGTTCACCGTCTAATAATAGATATAGGAGTAGATCAAGATCAATTGATCATACTCATAGTATAATAGAAGAGTATGCTCCTTCCAAGAGAAGGAACCGCGAGGAACATGGGCCCCTTTCTTATGCTGGAAGACATAATACTGACTATGACCATGATGGGGAAAGAAGGGTGGAATTTGTTAGGGAGCGTGGACATGTCAGTAGAGATTTGGTGGTAGATGATGGAAGGGAATGCAGTTCCAGTATTTACAGTCGGGAGTCTCGGGGTACAGATAGGTGCAAGGTCAGAGATGTAGAGTGGGATGTAAGAAGGGAAAAGGAACGAGAAAGGAGCAGGAATAGGGAGGTTGACCATGTCCGTGGGAGGGAAAAGGAACATGAAAGGAGTCATGAGAGGGATAGAAGGGATGTTGAAAAAGATAGGAGCAGGGGAAGAGAGGTGGATAGGGATAGAAGAAGAGAAAAGGAACGAGATAGGAGCCGGGAGACAGTGGTTGAGCGGGATAGAAGGGAGAAGGAAAGAGATAGGAGTAGGGACAGAACAAGGGGCGGTGAGAGAGATAGAGGCAGGGAGAGTGAAAGGGATGATAAGAACCGGGAAAGAGATAAAATCTGGGAGAGAGAGAAGGATAGGGGCTGGGACAGGGAGAAGGAGAGGGACAGGGACAGGGAGAGACGAGATGACAGAAATAGGCATAAGGATAGATACACTGTCAATGATAAAGATAAGTATCTTGGTTATGAGGATGGTAATGACAGCCGAGATAGATATAGATACTCTCGGCATTCAAGACACGAAGAAATTGATAATCATGGGGAGAGAAAAAGAAATTCTGAGCCTGTCAAGGGTTATAACACTATGGGCACTTCCTTGGCTGGGGGTGAAAACAAACTAGAAAGAGGTGAGGATGAACAAGATGACTTAGATGAGAAGGATACATTTCAATTTGCTGAACAAGAAGAGGAAGATCTCAATAGAATTAAGGAGGAGAGTAGAAGGAGAAGGGAAGCAATCATAGAGAAATATAAGAAGCAGCAGCAGCAAGCAGAACAAACTCCTGAAAATGAGGAAAAAGACAAAGATCCCATGGATATTCCTGCTGCCATTTCAGAAGCTCCTGACGGTAAGAATGATGGTGTTGATGTTTTTGAAGCGGAAACTTCTTTTTCTGTTGGGAAATCTCCTCCAGAAAATGGAAATTCTGCTTCTGAGAAGATCATTGGTGCTCGGGGCTTGGGAGAGGGTAGTCCAAAGAGTGAAAGATCAGGTGACAAGTTTTGTGACGATATATTTGGTGAGACGCCAACTGGAGTTCGAAAATTGGGCAAAGGAGATGGTTTACGGGTTGAGAGGAGTGGCCTGCATGACAATTGGGATGATGCAGAGGGGTATTACAGCTATCGTTTTGGTGAAATACTTGATGGTCGATACGAAGTTACTGCTGCTCATGGTAGAGGTGTCTTCTCAACAGTTGTTCGGGCAAAGAATCTTAAGACTAGTAATGGTGAGCCTGAAGAAGTAGCTATAAAAATTATTCGTAATAATGACACTATGTACAAGGCTGGTTTGGATGAGTTGGTCATATTAAAGAAATTAGTAGGTGCAGATCCAGATGATAAGCGTCATTGTGTTCGCTTCCTTTCAAGTTTTAAGTACAGGAATCACCTTTGTTTAGTTTTTGAATCTCTTCATATGAATCTACGTGAGGTTTTAAAGAAGTTTGGTCGCAATATTGGCCTTAGGCTAACAGCTGTGAGAGCATATGCGAAACAACTTTTTATTGCGCTGAAGCATCTCCGGAACTGTGGTGTTCTCCATTGTGATATAAAGCCAGATAATATGTTGGTGAATGAGGCTAAAAATGTATTGAAGCTTTGTGACTTTGGTAATGCCATGTTTGCTGGTAAGAATGAAGTTACACCATACCTTGTGAGTCGCTTTTATCGTGCTCCTGAAATAATACTTGGCTTGCCATATGATCATCCATTGGATATGTGGTCTGTAGGCTGTTGTTTGTATGAACTCTATACAGGAAAAGTTCTTTTTCCGGGTCCTACAAACAATGACATGCTACGGCTTCACATGGAATTGAAGGGCCCTTTTCCAAAGAAGATGCTTCGTAAGGGAGCATTTATTGAACAGCATTTTGATCAGGACTTGAATTTTCTTGCTACAGAAGAGGATTTAGTAACAAAAAAGACTATAAAGCGGCTGATTCTCAACATAAAGCCAAAAGATATTGGAACAATCATCACTGGCTCTCCTGGAGAGGATCCAAAGATGGTAGCCAACTTCAAAGATCTTCTGGATAAGGTTTTTGTCTTGGATCCGGACAAGAGGTTGACAGTCTCACAAGCGTTGAACCACCCATTCATCACTGGCAAGTGA 3228 0.4365 MASDDQGCRRKHRRSSSPEEAERSSKRHKHRHHSHRHHRHRHHGSKKREEEFELDSETVDTVPSPTRPPNSGPNTRGPDDDVEEGEILEEEGFGSRDGEIGKKQTESDAESGEIMGAGDRGSRSDTANLVPYTEETMLHCEDVVPSRKSVGINAKSSKSNNEDSSNGKFISPAIDGEEETWRQSYTDHNIHEGDGSPTRSSAEPLDGKYAREDTGGLGNGYLHPKPSKEDKWQHGELECFKGNEKLKDDYYNEDLEFNGAKVSNRNSSSESGGGKYRTLGSSPSNNRYRSRSRSIDHTHSIIEEYAPSKRRNREEHGPLSYAGRHNTDYDHDGERRVEFVRERGHVSRDLVVDDGRECSSSIYSRESRGTDRCKVRDVEWDVRREKERERSRNREVDHVRGREKEHERSHERDRRDVEKDRSRGREVDRDRRREKERDRSRETVVERDRREKERDRSRDRTRGGERDRGRESERDDKNRERDKIWEREKDRGWDREKERDRDRERRDDRNRHKDRYTVNDKDKYLGYEDGNDSRDRYRYSRHSRHEEIDNHGERKRNSEPVKGYNTMGTSLAGGENKLERGEDEQDDLDEKDTFQFAEQEEEDLNRIKEESRRRREAIIEKYKKQQQQAEQTPENEEKDKDPMDIPAAISEAPDGKNDGVDVFEAETSFSVGKSPPENGNSASEKIIGARGLGEGSPKSERSGDKFCDDIFGETPTGVRKLGKGDGLRVERSGLHDNWDDAEGYYSYRFGEILDGRYEVTAAHGRGVFSTVVRAKNLKTSNGEPEEVAIKIIRNNDTMYKAGLDELVILKKLVGADPDDKRHCVRFLSSFKYRNHLCLVFESLHMNLREVLKKFGRNIGLRLTAVRAYAKQLFIALKHLRNCGVLHCDIKPDNMLVNEAKNVLKLCDFGNAMFAGKNEVTPYLVSRFYRAPEIILGLPYDHPLDMWSVGCCLYELYTGKVLFPGPTNNDMLRLHMELKGPFPKKMLRKGAFIEQHFDQDLNFLATEEDLVTKKTIKRLILNIKPKDIGTIITGSPGEDPKMVANFKDLLDKVFVLDPDKRLTVSQALNHPFITGK 1075
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g0441 1075 MobiDBLite consensus disorder prediction 259 289 - -
Glsi05g0441 1075 ProSiteProfiles Protein kinase domain profile. 757 1072 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi05g0441 1075 MobiDBLite consensus disorder prediction 689 709 - -
Glsi05g0441 1075 ProSitePatterns Serine/Threonine protein kinases active-site signature. 884 896 IPR008271 GO:0004672|GO:0006468
Glsi05g0441 1075 MobiDBLite consensus disorder prediction 150 168 - -
Glsi05g0441 1075 Coils Coil 571 591 - -
Glsi05g0441 1075 MobiDBLite consensus disorder prediction 1 234 - -
Glsi05g0441 1075 MobiDBLite consensus disorder prediction 382 560 - -
Glsi05g0441 1075 SMART serkin_6 757 1072 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi05g0441 1075 MobiDBLite consensus disorder prediction 382 658 - -
Glsi05g0441 1075 CDD STKc_PRP4 756 1072 IPR044092 GO:0004674|GO:0006468|GO:0045292
Glsi05g0441 1075 Gene3D Transferase(Phosphotransferase) domain 1 817 1073 - -
Glsi05g0441 1075 PANTHER DUAL SPECIFICITY PROTEIN KINASE 452 1073 - -
Glsi05g0441 1075 Coils Coil 594 632 - -
Glsi05g0441 1075 SUPERFAMILY Protein kinase-like (PK-like) 744 1074 IPR011009 -
Glsi05g0441 1075 MobiDBLite consensus disorder prediction 257 333 - -
Glsi05g0441 1075 MobiDBLite consensus disorder prediction 582 597 - -
Glsi05g0441 1075 MobiDBLite consensus disorder prediction 630 645 - -
Glsi05g0441 1075 Pfam Protein kinase domain 759 1072 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi05g0441 1075 MobiDBLite consensus disorder prediction 598 623 - -
Glsi05g0441 1075 Gene3D Phosphorylase Kinase; domain 1 727 816 - -
Glsi05g0441 1075 MobiDBLite consensus disorder prediction 26 45 - -
Glsi05g0441 1075 FunFam serine/threonine-protein kinase PRP4 homolog 728 816 - -
Glsi05g0441 1075 MobiDBLite consensus disorder prediction 180 194 - -
Glsi05g0441 1075 MobiDBLite consensus disorder prediction 89 109 - -
Glsi05g0441 1075 FunFam Serine/threonine-protein kinase PRP4 homolog 817 1073 - -
Glsi05g0441 1075 MobiDBLite consensus disorder prediction 1 25 - -
Glsi05g0441 1075 MobiDBLite consensus disorder prediction 290 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g0441 Glsi-ChrGlsi05 54023449 54030552 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g0441 764 1073 MAP Kinase Gene Family AT4G01370 33.542 1.72e-26 110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-PRP4 Glsi05g0441 Pkinase 2.1e-47 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi05g0441 05 54023449 54030552 Glsi05g0441 05 54023449 54030552 ECH