Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g0424 ATGGAGCAGAGCTTTCTGGGTGTTCTCAAAGTTCGCATTAAAAGAGGTGTTAATCTTGCAATTCGCGATTCTCGTAGTAGTGATCCCTACGTTGTTGTCACCATGTGCGAACAGAAAAAGAAGACGAAAGTTGTGAAAGGTAGCTGCAATCCTGAGTGGAATGAAGAATTTTCACTGTATTTGAAGAATGTCACCACTTCAATTCAACTTACAGTTTATGACAAAGACACTTTCTCTGATGATGACCATATGGGGGAAGCAGACATACAAATAAAGCCATATCTTGAGTGTGTGAAGATGGACTTGTCTGGGCTCCCAAATGGCTGTGCAGTCAGGAAAGTTCAACCAGGTAGGAACAACTGCCTTGCGGAGGAGAGCTGCTGCACATGGAATGATGGGAAAATCACCCAAGAGATGTTTCTTAGATTGAAAAATGTTGAGTGTAGCGAAGTAGTGGTGGAGATAGAGTGGTTTGATATTCCAGGTGGTAAGGGCTTGTCAGAGGTTGAGTTACACGTTTGTCCCCGTTCCTCAATGTATACAGAGTATTGA 552 0.4293 MEQSFLGVLKVRIKRGVNLAIRDSRSSDPYVVVTMCEQKKKTKVVKGSCNPEWNEEFSLYLKNVTTSIQLTVYDKDTFSDDDHMGEADIQIKPYLECVKMDLSGLPNGCAVRKVQPGRNNCLAEESCCTWNDGKITQEMFLRLKNVECSEVVVEIEWFDIPGGKGLSEVELHVCPRSSMYTEY 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g0424 183 CDD C2_ArfGAP 6 148 - -
Glsi05g0424 183 Gene3D C2 domain 4 161 IPR035892 -
Glsi05g0424 183 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 5 164 IPR044562 -
Glsi05g0424 183 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 4 159 IPR035892 -
Glsi05g0424 183 Pfam C2 domain 7 93 IPR000008 -
Glsi05g0424 183 ProSiteProfiles C2 domain profile. 1 104 IPR000008 -
Glsi05g0424 183 SMART C2_3c 8 103 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g0424 Glsi-ChrGlsi05 53634866 53637738 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g0424 39 167 C2H2 Transcription Factor Family AT1G70790 57.252 2.98e-52 162