Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g0408 ATGAAACTTCCCTTCTTCTCAACTCACTGCCAACATTGCTCTGCCATTAAATTTCAGCATCCCTCGCTTACCCTTTTACCTGTCAGTCCTTCTTCTACCTCTGCCAACGCCAGCAGAACCCATTGGCCACGCATGGACATCGCCTCTGCCTTCCACCGCTACCACCGAAAAGACAAGGTCGTTGTCATCATGGGAGCCACCGGCGCCGGGAAATCCCGCCTTTCCATTGACCTCGCCACCCGGTTCCCCTTCTCGGAAATAATTAACTCCGACAAAATGCAGGTCTACAGAGGGCTCGACATAACCACCAACAAGATTCCCATCGACGAACGGAACGGCGTCCCTCACCATCTTCTCGGCGAGGTCGACCCAGAAAATGGGGATTTCTCCCCTTCGGAGTTTCGCCTGCGCGGTGGCTCAGTTATCTCGGATATCAGTTCAAGGAGGAAACTTCCCGTCGTCGTTGGTGGGTCTAATTCGTTTGTTCATGCTCTGCTCGTGGACCGATTCGACCCTAAGTTGAATGTGTTTGATGGGTCATCATCATCGTCGACGTCGAGTTCGATCTCCTCCGCGTTTAGGTACAAGTGCTGCTTCCTTTGGGTGGACGTCTCATTCCCTGTGCTATCAGACTACTTATCGAAGCGAGTCGACGACATGCTTGACTCAGGAATGGTAGACGAGTTGGCCGAGTTCTTCGACCCGGAATCGGACGATTTGGAAGAAGACTCTGAGCACCGCACTGGGTTGAGGAAAGCCATCGGCGTGCCGGAATTCGACCAGTACTTCAAGAAGTACCCGCCCCCCGATGGGCTCAGCATAGGTGGCTCGGGTGAAGAGGATCGAGTGCGGGAAGCATTATATGAAGAGGCAGTAAGGGCGATAAAGGACAACACGTGTCAGCTAGTGAAGAGGCAGATAGGGAAGATCTTGCAGCTAAAAGGGGCAGGGTGGGACCTAAGGAAACTAGACGCGACGGAGGCGTTTCGGGCGGCGATGAAGTCAGGATGTGGTGCCGAGGACGGTGGCGAGAGGTGGTCGGATATCTGGGAGAGGACGGTGGTGGAGCCAAGCGTGAAGATTGTGAAGAGGTTCTTGAAGGAGTAG 1107 0.5402 MKLPFFSTHCQHCSAIKFQHPSLTLLPVSPSSTSANASRTHWPRMDIASAFHRYHRKDKVVVIMGATGAGKSRLSIDLATRFPFSEIINSDKMQVYRGLDITTNKIPIDERNGVPHHLLGEVDPENGDFSPSEFRLRGGSVISDISSRRKLPVVVGGSNSFVHALLVDRFDPKLNVFDGSSSSSTSSSISSAFRYKCCFLWVDVSFPVLSDYLSKRVDDMLDSGMVDELAEFFDPESDDLEEDSEHRTGLRKAIGVPEFDQYFKKYPPPDGLSIGGSGEEDRVREALYEEAVRAIKDNTCQLVKRQIGKILQLKGAGWDLRKLDATEAFRAAMKSGCGAEDGGERWSDIWERTVVEPSVKIVKRFLKE 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g0408 368 FunFam Adenylate isopentenyltransferase 206 320 - -
Glsi05g0408 368 Pfam IPP transferase 94 168 - -
Glsi05g0408 368 Pfam IPP transferase 190 307 - -
Glsi05g0408 368 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 57 366 IPR039657 -
Glsi05g0408 368 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 206 320 - -
Glsi05g0408 368 Gene3D - 57 366 IPR027417 -
Glsi05g0408 368 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 57 240 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g0408 Glsi-ChrGlsi05 53164780 53165886 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g0408 191 367 C2H2 Transcription Factor Family AT2G27760 27.041 2.41e-13 69.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi05g0408 05 53164780 53165886 Glsi05g0408 05 53164780 53165886 ECH