Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g0392 ATGGAGGATCATGATCTATTTGTTTACCCGAGTAAAAGAACAAACTCAAGTACGGCCGTTGCCGCTGCCACAGCGACGACACGGTTGAAGCTTTTCGGCTTCAGCGTCCAGGAAGACATGGAAGATGAAGTAGGGCTTGAAGATGTAGCAGACTCAATTGCCAAGGCCACTTCCCCATCTGGGTCGCCGGATTCCGGCGGCATCGGTGGATGTATCGGCGGCGATGGTGGCGGAGCTTTCCCTCCTTCCTCCGGTGACAGGAAATACGAGTGCCAGTATTGTTGCCGGGAGTTTGCAAATTCACAAGCACTTGGTGGGCACCAGAACGCTCACAAGAAAGAACGTCAGCAGCTCAAGCGGGCTCAGTTACAAGCCAATAGACACGCTGCCGTTTCGTTCGTAAGAAACCCGATTATCTCCGCCTTCGCACCTCCGCCGCACCTGCTGTCTCCGACGGGGCCCATGGTGATTCCGGCGGGTACTCCATCTTGGGTCTACGTGCCGCCACGTGCCGCGCCTCCTCCTTTTCACGTGTCGGTATCGCACGGGAGCGTCTTCCCGTCGGCGAGTAGTACTACCGTCTGTAACATCAACAATTATAGTAGTAGCAGTAATAATCAAAGTGGGAGATCAACGTGTACAAGGATGTTATCCTATGGTGGCGGTGTAGGGGATTCGTCATCCGCATTGTCAACGATGGGGTCGCAAGTGCAGGCCCAAGTCCACGGGAGAGTAGACGGGCCTTCTTTGAGTAGGTTCACAAAAGGGGATGGGGGGCCCAGTTTCGACGACTCATTGGGCTTGGACTTGCATCTTAGCCTGGCGCCAGCTGCGCCTTGA 840 0.5512 MEDHDLFVYPSKRTNSSTAVAAATATTRLKLFGFSVQEDMEDEVGLEDVADSIAKATSPSGSPDSGGIGGCIGGDGGGAFPPSSGDRKYECQYCCREFANSQALGGHQNAHKKERQQLKRAQLQANRHAAVSFVRNPIISAFAPPPHLLSPTGPMVIPAGTPSWVYVPPRAAPPPFHVSVSHGSVFPSASSTTVCNINNYSSSSNNQSGRSTCTRMLSYGGGVGDSSSALSTMGSQVQAQVHGRVDGPSLSRFTKGDGGPSFDDSLGLDLHLSLAPAAP 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g0392 279 ProSitePatterns Zinc finger C2H2 type domain signature. 91 111 IPR013087 -
Glsi05g0392 279 Gene3D Classic Zinc Finger 81 136 - -
Glsi05g0392 279 ProSiteProfiles Zinc finger C2H2 type domain profile. 89 116 IPR013087 -
Glsi05g0392 279 FunFam Zinc finger protein 6 82 139 - -
Glsi05g0392 279 SUPERFAMILY beta-beta-alpha zinc fingers 85 116 IPR036236 -
Glsi05g0392 279 PANTHER ZINC FINGER PROTEIN 5 15 278 IPR044299 GO:0010090
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g0392 Glsi-ChrGlsi05 52820347 52821186 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g0392 20 277 C2H2 Transcription Factor Family AT1G68360 46.154 3.49e-54 174
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi05g0392 05 52820347 52821186 Glsi05g0392 05 52820347 52821186 ECH