Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g0391 ATGGGGATGGGTTCCAAAATGGAAGGACCATCTACCCCATCAATTCGACGGGACCCATATGAGGTATTGTCCGTGTCAAGGGACTCAAATGATCAGGAGATAAAAACCTCTTACAGAAAGCTCGCTCTCAAGTATCACCCTGACAAGAATGTTAACAATCCTGAAGCTGCAGAACTTTTTAAAGAGGTTGCATATTCATACAGTATCTTGTCTGACCCTGAGAAGAGAAGGCAATATGATAGTGCTGGATTTGAGGCACTTGATGCTGATAGCATGGACATGGAAGTTGACTTATCCAATCTTGGAACAGTCAACACAATGTTTGCAGCTTTGTTCAGCAAGCTGGGTGTCCCTATCAAGACTACCATTTCAGCTAATGTTCTTGAAGAAGCTCTGAATGGCACAGTTACAGTCAGACCCCTTCCAATTGGAACATCAGTTAGTGGAAAGGTAGAGAAGCAATGTGCCCATTTTTTTGGCGTGACAATAAATGAGCAGCAAGCTGAGTCAGGGGTTGTAGTAAGAGTTACTTCCACTGCACAAAGCAAATTCAAGTTGCTCTACTTTGAACATGATGCAAATGGTGGCTATGGTTTGGCATTGCAGGAAGAGAGTGAGAAGACTGGCAAGGTGACATCTGCTGGAATGTATTTCTTACATTTTCAAGTGTACAGAATGGATTCAACTGTGAATGCTTTAGCAATGGCCAAGGATCCTGAAGCTGCCTTCTTTAAAAGGTTGGAAGGTCTTCAACCTTGTGAAGTCTCAGAATTGAAGCCTGGAACTCATATATTTGCCGTTTATGGAGATAACTTCTTTAAGACTGCATCCTATACGATTGAGGCGCTTTGTGCAAAATCATACGAGGATACCACCCAAAAACTCAAGGACATTGAGGCCCAAATTTTAGTGAAAAGGAACGAGTTACGCCAATTTGAAACAGAATATAGAAAGGCATTGGCACGCTATCAAGAAGCCACTGATAGATACACCCGAGAAAAACAGTCGGTAGATGAGCTTCTGAAAGAAAGAGATGGTATCCATTCTTCCTTCACTGTTGCCAAGACAACCAATATTAGTGGGAATGGTAGTAATCTGAGTAATGGAAGTACTAGCAAATTTGCTGGTGAAGATTCTAGAGTTGAGAGCCCTGGGGAAGATGGAGGCTCAGATGGCAAGGACAAAGCGACAGGCAAAAAGAAATGGTTTAATCTCAATCTTAAGGGTTCCGATAAGAGATTGATCTAA 1248 0.4223 MGMGSKMEGPSTPSIRRDPYEVLSVSRDSNDQEIKTSYRKLALKYHPDKNVNNPEAAELFKEVAYSYSILSDPEKRRQYDSAGFEALDADSMDMEVDLSNLGTVNTMFAALFSKLGVPIKTTISANVLEEALNGTVTVRPLPIGTSVSGKVEKQCAHFFGVTINEQQAESGVVVRVTSTAQSKFKLLYFEHDANGGYGLALQEESEKTGKVTSAGMYFLHFQVYRMDSTVNALAMAKDPEAAFFKRLEGLQPCEVSELKPGTHIFAVYGDNFFKTASYTIEALCAKSYEDTTQKLKDIEAQILVKRNELRQFETEYRKALARYQEATDRYTREKQSVDELLKERDGIHSSFTVAKTTNISGNGSNLSNGSTSKFAGEDSRVESPGEDGGSDGKDKATGKKKWFNLNLKGSDKRLI 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g0391 415 CDD DnaJ 18 72 IPR001623 -
Glsi05g0391 415 MobiDBLite consensus disorder prediction 379 398 - -
Glsi05g0391 415 PRINTS DnaJ domain signature 20 38 IPR001623 -
Glsi05g0391 415 PRINTS DnaJ domain signature 38 53 IPR001623 -
Glsi05g0391 415 PRINTS DnaJ domain signature 75 94 IPR001623 -
Glsi05g0391 415 PRINTS DnaJ domain signature 55 75 IPR001623 -
Glsi05g0391 415 MobiDBLite consensus disorder prediction 358 398 - -
Glsi05g0391 415 Coils Coil 288 343 - -
Glsi05g0391 415 SMART dnaj_3 17 75 IPR001623 -
Glsi05g0391 415 PANTHER DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN) 4 413 - -
Glsi05g0391 415 Pfam DnaJ domain 18 80 IPR001623 -
Glsi05g0391 415 MobiDBLite consensus disorder prediction 1 31 - -
Glsi05g0391 415 ProSitePatterns Nt-dnaJ domain signature. 60 79 IPR018253 -
Glsi05g0391 415 SUPERFAMILY Chaperone J-domain 17 88 IPR036869 -
Glsi05g0391 415 FunFam Chaperone protein dnaJ 16 3 100 - -
Glsi05g0391 415 MobiDBLite consensus disorder prediction 358 377 - -
Glsi05g0391 415 ProSiteProfiles dnaJ domain profile. 18 83 IPR001623 -
Glsi05g0391 415 Gene3D DnaJ domain 5 101 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g0391 Glsi-ChrGlsi05 52798170 52806402 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g0391 11 90 C2H2 Transcription Factor Family AT1G74250 43.529 2.77e-13 69.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi05g0391 05 52798170 52806402 Glsi05g0391 05 52798170 52806402 ECH