Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g0387 ATGGCGGCACCCTCTTTCTTCATTGTACACGCTAGCTTCTTCTCCTTAGTTTTCCATTTAGTTCTTCTCGTTCATGGCTCCAAAAACCCAGATTTAGAAGCTCTCATGGCGTTCAAAGCCGCTTCAGATACCTTCAACAAGCTCACCACTTGGAACTCCAGCACTGATCCATGTACTTGGTCCGGCGTCTCTTGCCTCCATAACCGTGTCTCGCGGCTGGTTCTTGAGAATCTCGATCTCTGTGGCTCCTTCCAACCTTTATCTTCTTTGACTCAGCTTCGAGTTCTGAGCCTTAAGCGAAACCGCCTTTCCGGCCCTATTCCAAGTCTCTCCAATTTCACAGCTCTAAAGCTTCTGTTTTTGTCTTACAATGAGTTTTCCGGCGAGTTCCCTGCGACGGTTACGTCGCTTTTCCGCTTGTACCGTCTTGATCTGTCTCACAACAACTTGTCCGGGGACATTCCGGCGACGGTCAACCATTTGACCCACATTCTCACTCTCCATCTCAACGAGAACCGGTTCTCCGGTCACATTCCCGGCCTGAACCTTCCCAACCTGCAATACTTCAATGTCTCCGGGAACCGCCTCTCCGGCCAAATACCCAAATCGTTGTCGGGTTTCCCTGAATCCTGTTTCGCCCTGAACCCATCATTATGCGGAGCCCCAATGCAGAACTGTAAGGATTTCGTGGCTGAACCCAGCAAACCCGGATCTGAAGGAGCCATTGCGTCGCCATTGACGCCGAATAGTAACCCCCCATCAACAACCGTATCGTCCTCACCGAGCTCAATGCCTTCAAATGGAGCAATACCCAGAACATCGTCAGCTAAAACCCACCAAAACGGAGCAGCGAAAATAGGCCCAGTAGCTCTGATCGCCATTATACTCGGCGACATTCTGGTTCTCGCCGTGGTATCCCTCCTCCTCTACTGCTACTTTTGGCGAAATTACTCTGCAAAATTGGAAGAGGGAAAAGGGTCAAAGCTTATGGAGAGCGAGAAGATTGTTTATTCATCGAGTCCATACCCAACCCAACCCGGTTTCGAGAGGGGTCGAATGGTGTTCTTCGAAGGAGTAAGGAAATTCGAGCTAGAGGACCTGCTTCGAGCTTCTGCGGAAATGCTGGGAAAAGGTGGGTTTGGTACAGCTTACAAGGCAGTTCTGGATGATGGAAGTGTCGTTGCGGTGAAGAGGCTCAAGGATGCTCAGATTGGAGGGAAGAGAGAGTTCGAGCAGCACATGGAAGTTCTGGGAAGGCTGAGGCATCCGAACATTGTTAACGTGAGGGCTTACTACTTTGCAAGAGACGAGAGGTTGCTGGTCTCTGACTTCATGCCCAATGGAAACCTGTTCTGGCTCCTTCACGGTAACCGAGGACCAGGACGAACCCCGTTGGACTGGACCACAAGGCTAAAAATAGCAGCTGGAGCGGCTCGAGGCATAGCCTTTATTCACAGCTCGGGCAAGTCCCTTAGGCTCACCCACGGTAACATCAAATCTACCAACATCCTCCTCGACAGGGCGGGAAATGCACGCGTGGCAGATTTTGGGCTCTTGATATTCGCGGGCCCCACCGCCACGTCTGCTCCGAGATCCAACGGCTACCGTGCTCCGGAAGCACTGGACGGTCGGAGATGCACCCCGAAGTCTGATGTGTACTCCTTCGGCGTTCTCCTCCTGGAGATTCTCACCGGGAAGTGCCCCTCCACCGTGGACAGTGGTGGTGGGCCCGTGGGTGGCAATGGTGGGGTCGTAGATCTTCCCCGATGGGTCCAGTCTGTGGTTAGAGAGGAATGGACGGCTGAGGTGTTCGATCTGGAGCTGATGAGGTATAAGGACATTGAGGACGAGATGGTGGGGCTGCTTCAGATTGCTTTGGCTTGTACTGCGGCTGCGCCTGATCAACGGCCCAGCATGAGCCACGTGGTCAAGATGATCGAGGAGATTCGTGGGGTCGAGGTATCCCCGTGTCATGACACGTTGGACTCTGCGTCTGAGTCACCTTCCTTGTCTGAAGATGCCTCTTGA 2028 0.5286 MAAPSFFIVHASFFSLVFHLVLLVHGSKNPDLEALMAFKAASDTFNKLTTWNSSTDPCTWSGVSCLHNRVSRLVLENLDLCGSFQPLSSLTQLRVLSLKRNRLSGPIPSLSNFTALKLLFLSYNEFSGEFPATVTSLFRLYRLDLSHNNLSGDIPATVNHLTHILTLHLNENRFSGHIPGLNLPNLQYFNVSGNRLSGQIPKSLSGFPESCFALNPSLCGAPMQNCKDFVAEPSKPGSEGAIASPLTPNSNPPSTTVSSSPSSMPSNGAIPRTSSAKTHQNGAAKIGPVALIAIILGDILVLAVVSLLLYCYFWRNYSAKLEEGKGSKLMESEKIVYSSSPYPTQPGFERGRMVFFEGVRKFELEDLLRASAEMLGKGGFGTAYKAVLDDGSVVAVKRLKDAQIGGKREFEQHMEVLGRLRHPNIVNVRAYYFARDERLLVSDFMPNGNLFWLLHGNRGPGRTPLDWTTRLKIAAGAARGIAFIHSSGKSLRLTHGNIKSTNILLDRAGNARVADFGLLIFAGPTATSAPRSNGYRAPEALDGRRCTPKSDVYSFGVLLLEILTGKCPSTVDSGGGPVGGNGGVVDLPRWVQSVVREEWTAEVFDLELMRYKDIEDEMVGLLQIALACTAAAPDQRPSMSHVVKMIEEIRGVEVSPCHDTLDSASESPSLSEDAS 675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g0387 675 SUPERFAMILY L domain-like 46 207 - -
Glsi05g0387 675 ProSitePatterns Protein kinases ATP-binding region signature. 375 397 IPR017441 GO:0005524
Glsi05g0387 675 Pfam Leucine rich repeat N-terminal domain 29 65 IPR013210 -
Glsi05g0387 675 ProSiteProfiles Protein kinase domain profile. 369 661 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi05g0387 675 MobiDBLite consensus disorder prediction 243 278 - -
Glsi05g0387 675 Gene3D Ribonuclease Inhibitor 24 84 IPR032675 -
Glsi05g0387 675 Gene3D Ribonuclease Inhibitor 85 229 IPR032675 -
Glsi05g0387 675 FunFam Nuclear pore complex protein NUP107 28 180 - -
Glsi05g0387 675 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 445 656 - -
Glsi05g0387 675 Pfam Protein kinase domain 372 644 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi05g0387 675 Gene3D Transferase(Phosphotransferase) domain 1 445 662 - -
Glsi05g0387 675 Gene3D Phosphorylase Kinase; domain 1 349 444 - -
Glsi05g0387 675 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 18 651 IPR046959 -
Glsi05g0387 675 MobiDBLite consensus disorder prediction 234 278 - -
Glsi05g0387 675 SUPERFAMILY Protein kinase-like (PK-like) 373 647 IPR011009 -
Glsi05g0387 675 FunFam pollen receptor-like kinase 1 342 444 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g0387 Glsi-ChrGlsi05 52721774 52726343 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g0387 1 674 Receptor kinase-like Gene Family AT1G68400 64.047 0.0 819
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Glsi05g0387 Pkinase 1.3e-36 CL0016