Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g0377 ATGGCGTCTGGCGAAGGGAGGCGTCACCATCATAACCTTGTTCCACTTGCTGCGTTGATAAGCAGAGAGACGAAGAGTGAGAAGATGGAGAAGCCCACTGTGAGGTTTGGGCATGCCGCTCAGTCTAAGAAAGGGGAGGATTACTTTCTAATAAAGACTGATTGTCAGCGTGTACCTGGAAATTCTTCATCAACTTTTTCTGTATTTGCGATCTTCGATGGACACAATGGAAATGCTGCAGCCATTTTTAGTAGGGAGCATTTGTTAAATCACGTTTTGGGTGCTCTTCCTCGAGGAATTGGAAGAGAGGAGTGGCTTCAGGCATTACCTCGCGCATTGGTTTCTGGATTTGTGAAGACTGACAAGGAATTTCAGAGCAGAGGAGAAACTTCTGGAACTACGGCCACATTTGTGATAGTTGATAGATGGACTGTGACAGTTGCATCAGTTGGAGATTCCCGTTGTATACTAGAGACCCAGGGTGGTGCTGTTACCACCTTAACTGTTGATCACAGGCTTGAAGAGAATATTGAAGAGAGAGAACGTGTTACTGCAAGTGGAGGTGAAGTTGGGAGGCTTAGCATTGTTGGTGGTGCTGAGATTGGTCCCCTTCGTTGTTGGCCGGGGGGTCTATGCCTTTCTAGGTCAATAGGAGACATGGATGTTGGGGAGTTTATAGTTCCAATACCATATGTCAAACAAGTGAAGCTATCAAATGCTGGTGGGAGGCTTATAATTGCTTCCGATGGTATCTGGGATGCTCTATCCTCAGAAATGGCAGCAAATTCTTGTCAGGGTTTGCCTGCAGAACTTGCCGCGAGGCAGGTCGTAAAGGAAGCCTTAAGGACAAGAGGTTTAAAGGATGATACAACTTGCATAGTAGTTGACATAATTCCTCCAGATAATGTATTGCCGCCGCCACCTCCTCCCCTCAAAAAGCAGAACAAGTTGAGAGCTCTACTATTCAGGAAGAAGAACCGTGATTCTGCTGGTAAGCTGTCAAAGAAGCTCTCAGCTGTTAATATAGTTGAGGAACTGTTTGAAGAAGGATCAGCAATGCTTGCTGAAAGACTAGGAAATGATGGCAATTCAGGGCAATCAACATCTGGGCTTTTTGTGTGCGCTGTGTGCCAAGTTGATCTTGCTCCAAGTGAAGGTATCTCTGTTCATGCTGGCTCTATTTTCTCCACCAGCTCCAAGCCTTGGCAAGGGCCTTTTCTTTGTGCTGATTGTCGCAACAAGAAAGACGCCATGGAAGGTAAACGTCCTAGTGGAATTAAAGTGTTGTAG 1290 0.4597 MASGEGRRHHHNLVPLAALISRETKSEKMEKPTVRFGHAAQSKKGEDYFLIKTDCQRVPGNSSSTFSVFAIFDGHNGNAAAIFSREHLLNHVLGALPRGIGREEWLQALPRALVSGFVKTDKEFQSRGETSGTTATFVIVDRWTVTVASVGDSRCILETQGGAVTTLTVDHRLEENIEERERVTASGGEVGRLSIVGGAEIGPLRCWPGGLCLSRSIGDMDVGEFIVPIPYVKQVKLSNAGGRLIIASDGIWDALSSEMAANSCQGLPAELAARQVVKEALRTRGLKDDTTCIVVDIIPPDNVLPPPPPPLKKQNKLRALLFRKKNRDSAGKLSKKLSAVNIVEELFEEGSAMLAERLGNDGNSGQSTSGLFVCAVCQVDLAPSEGISVHAGSIFSTSSKPWQGPFLCADCRNKKDAMEGKRPSGIKVL 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g0377 429 PANTHER PROTEIN PHOSPHATASE 36 296 IPR015655 GO:0004722|GO:0006470
Glsi05g0377 429 Pfam Protein phosphatase 2C 61 282 IPR001932 -
Glsi05g0377 429 SMART PP2C_SIG_2 51 297 IPR001932 -
Glsi05g0377 429 CDD PP2Cc 36 297 IPR001932 -
Glsi05g0377 429 SMART PP2C_4 27 295 IPR001932 -
Glsi05g0377 429 SUPERFAMILY PP2C-like 40 297 IPR036457 -
Glsi05g0377 429 Gene3D - 34 301 IPR036457 -
Glsi05g0377 429 FunFam probable protein phosphatase 2C 5 35 302 - -
Glsi05g0377 429 ProSiteProfiles PPM-type phosphatase domain profile. 28 297 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g0377 Glsi-ChrGlsi05 52364581 52369306 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g0377 1 429 PP2C-type Phosphatase Gene Family AT1G68410 79.634 0.0 703