Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi05g0375 ATGAGTAGCAGTGGCCAATCTTTCGGTAATAGGCACAGCACCAGAGACATAATCTGCAACGCTGGTGCAGGTGCCTCTGCTGGGGCAATAGCGGCTACATTTGTTTGCCCATTGGATGTAATCAAGACTAGACTACAAGTTCATGGCCTTCCTCCTGGGCAGAAAGGTAGTGTCATCATCACGAGCTTGCAGAATATAGTAAGGAATGAAGGTTTCAGGGGACTGTATCGTGGCCTTTCACCTACAATACTAGCATTACTTCCAAACTGGGCAGTTTACTTCACAGTTTATGAGCAACTAAAAGGCCTTCTTCGTTCACGGGATGGTTGCAACCAATTAACAACTATCGAAAATATGATAGCTGCTGCTGGTGCTGGGGCAGCAACAGCAATTTCAACAAATCCTTTGTGGGTTGTTAAGACCAGACTCCAAACACAGGGAATGAGGCTAGATGTCGTTCCTTACAAAAGCATTCTGTCTGCATTGACGAGGATTACACATGAGGAAGGCATGCGAGGACTATATAGTGGCATCGTGCCTTCATTGGCCGGTGTAAGTCATGTTGCAATTCAGTTCCCAGCATATGAAAGGATCAAGTTGTACATAGCGAAAAAGGATAATACAACTGTTAACAAGCTAAGTCCAGGAAACGTTGCCATTGCATCATCAATTTCAAAAGTGATTGCCTCTGTAATGACTTATCCACATGAGGTAATACGTTCAAGGCTGCAAGAGCAAGGCCAGGCCAAAAATGCCGGGGTCCAATATTCAGGGGTGGTTGATTGTACTAGGAAGGTGTTCCAAAAGGAAGGCCTTCCTGGCTTTTATCGTGGTTGTGCAACAAATTTACTAAGAACAACTCCGTCAGCTGTTATTACAGTCACCGGTTATGAGATGATACACAGGTTCCTGCAACGGGTTGTACCTCAAGACAAGGGATATTCACAAGGTTCTCCTAAATCAGATGGTCTTAACAAGCCCCGGCCAGAAGACAGTGACATAAATTTAAAAAATCACACCGATTGGCGGCAATCACCGTCTCAGTCTGACAAGAAAGTTTCATCAATTCCTCTGGGAAATAAAGAGCAGCTATCAAGACATTGA 1104 0.4447 MSSSGQSFGNRHSTRDIICNAGAGASAGAIAATFVCPLDVIKTRLQVHGLPPGQKGSVIITSLQNIVRNEGFRGLYRGLSPTILALLPNWAVYFTVYEQLKGLLRSRDGCNQLTTIENMIAAAGAGAATAISTNPLWVVKTRLQTQGMRLDVVPYKSILSALTRITHEEGMRGLYSGIVPSLAGVSHVAIQFPAYERIKLYIAKKDNTTVNKLSPGNVAIASSISKVIASVMTYPHEVIRSRLQEQGQAKNAGVQYSGVVDCTRKVFQKEGLPGFYRGCATNLLRTTPSAVITVTGYEMIHRFLQRVVPQDKGYSQGSPKSDGLNKPRPEDSDINLKNHTDWRQSPSQSDKKVSSIPLGNKEQLSRH 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi05g0375 367 FunFam Nicotinamide adenine dinucleotide transporter 2, mitochondrial 16 304 - -
Glsi05g0375 367 ProSiteProfiles Solute carrier (Solcar) repeat profile. 213 303 IPR018108 -
Glsi05g0375 367 SUPERFAMILY Mitochondrial carrier 15 299 IPR023395 -
Glsi05g0375 367 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 17 309 IPR044712 GO:0006862|GO:0055085
Glsi05g0375 367 Pfam Mitochondrial carrier protein 112 205 IPR018108 -
Glsi05g0375 367 Pfam Mitochondrial carrier protein 20 105 IPR018108 -
Glsi05g0375 367 Pfam Mitochondrial carrier protein 213 306 IPR018108 -
Glsi05g0375 367 PRINTS Mitochondrial carrier protein signature 128 146 IPR002067 GO:0055085
Glsi05g0375 367 PRINTS Mitochondrial carrier protein signature 20 33 IPR002067 GO:0055085
Glsi05g0375 367 PRINTS Mitochondrial carrier protein signature 222 244 IPR002067 GO:0055085
Glsi05g0375 367 PRINTS Mitochondrial carrier protein signature 33 47 IPR002067 GO:0055085
Glsi05g0375 367 PRINTS Mitochondrial carrier protein signature 78 98 IPR002067 GO:0055085
Glsi05g0375 367 MobiDBLite consensus disorder prediction 324 338 - -
Glsi05g0375 367 Gene3D Mitochondrial carrier domain 109 307 IPR023395 -
Glsi05g0375 367 Gene3D Mitochondrial carrier domain 3 108 IPR023395 -
Glsi05g0375 367 MobiDBLite consensus disorder prediction 339 367 - -
Glsi05g0375 367 MobiDBLite consensus disorder prediction 310 367 - -
Glsi05g0375 367 ProSiteProfiles Solute carrier (Solcar) repeat profile. 15 103 IPR018108 -
Glsi05g0375 367 ProSiteProfiles Solute carrier (Solcar) repeat profile. 113 201 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi05g0375 Glsi-ChrGlsi05 52343690 52349202 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi05g0375 1 361 Chloroplast and Mitochondria Gene Families AT1G25380 65.312 2.85e-151 429